RNA–Protein interactions for RNA: ENST00000466793.1

SMPDL3B-204, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

TSL 3

Gene SMPDL3B, Length 726 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-204ENST00000466793 C1orf141Q5JVX7 400 aa16.73■□□□□ 0.27
SMPDL3B-204ENST00000466793 CCDC24Q8N4L8 307 aa16.73■□□□□ 0.27
SMPDL3B-204ENST00000466793 ZNF496Q96IT1 587 aaPredicted RBP16.73■□□□□ 0.27
SMPDL3B-204ENST00000466793 ADRA2BP18089 450 aa16.72■□□□□ 0.27
SMPDL3B-204ENST00000466793 CCDC87Q9NVE4 849 aa16.72■□□□□ 0.27
SMPDL3B-204ENST00000466793 DIAPH1O60610 1272 aaKnown RBP16.71■□□□□ 0.27
SMPDL3B-204ENST00000466793 PIP4K2AP48426 406 aaPredicted RBP16.71■□□□□ 0.27
SMPDL3B-204ENST00000466793 ANKRD31Q8N7Z5 1873 aa16.7■□□□□ 0.26
SMPDL3B-204ENST00000466793 HTRA3P83110 453 aa16.7■□□□□ 0.26
SMPDL3B-204ENST00000466793 GPBP1L1Q9HC44 474 aaPredicted RBP16.7■□□□□ 0.26
SMPDL3B-204ENST00000466793 ARFGEF1Q9Y6D6 1849 aa16.7■□□□□ 0.26
SMPDL3B-204ENST00000466793 SBF1O95248 1867 aa16.69■□□□□ 0.26
SMPDL3B-204ENST00000466793 ARHGAP27Q6ZUM4 889 aa16.69■□□□□ 0.26
SMPDL3B-204ENST00000466793 RSPH6AQ9H0K4 717 aa16.69■□□□□ 0.26
SMPDL3B-204ENST00000466793 NPC1L1Q9UHC9 1359 aa16.68■□□□□ 0.26
SMPDL3B-204ENST00000466793 FCHSD2O94868 740 aa16.68■□□□□ 0.26
SMPDL3B-204ENST00000466793 EIF5P55010 431 aaKnown RBP16.68■□□□□ 0.26
SMPDL3B-204ENST00000466793 RASSF7Q02833 373 aa16.68■□□□□ 0.26
SMPDL3B-204ENST00000466793 SLC51AQ86UW1 340 aa16.68■□□□□ 0.26
SMPDL3B-204ENST00000466793 PARP3Q9Y6F1 533 aa16.68■□□□□ 0.26
SMPDL3B-204ENST00000466793 COL15A1P39059 1388 aa16.67■□□□□ 0.26
SMPDL3B-204ENST00000466793 CEMIPQ8WUJ3 1361 aa16.67■□□□□ 0.26
SMPDL3B-204ENST00000466793 A1BGP04217 495 aa16.67■□□□□ 0.26
SMPDL3B-204ENST00000466793 CANXP27824 592 aaKnown RBP16.67■□□□□ 0.26
SMPDL3B-204ENST00000466793 DCTN1Q14203 1278 aa16.67■□□□□ 0.26
SMPDL3B-204ENST00000466793 C9orf131Q5VYM1 1079 aa16.67■□□□□ 0.26
SMPDL3B-204ENST00000466793 DNAJC5GQ8N7S2 189 aa16.67■□□□□ 0.26
SMPDL3B-204ENST00000466793 NARFQ9UHQ1 456 aa16.67■□□□□ 0.26
SMPDL3B-204ENST00000466793 TBC1D9BQ66K14 1250 aa16.66■□□□□ 0.26
SMPDL3B-204ENST00000466793 USP16Q9Y5T5 823 aa16.66■□□□□ 0.26
SMPDL3B-204ENST00000466793 COL11A2P13942 1736 aaPredicted RBP16.65■□□□□ 0.26
SMPDL3B-204ENST00000466793 U2SURPO15042 1029 aaKnown RBP16.64■□□□□ 0.25
SMPDL3B-204ENST00000466793 HSPA6P17066 643 aa16.64■□□□□ 0.25
SMPDL3B-204ENST00000466793 PPP2R1AP30153 589 aa16.64■□□□□ 0.25
SMPDL3B-204ENST00000466793 PRKAR2BP31323 418 aa16.64■□□□□ 0.25
SMPDL3B-204ENST00000466793 TBC1D2BQ9UPU7 963 aa16.64■□□□□ 0.25
SMPDL3B-204ENST00000466793 HEG1Q9ULI3 1381 aa16.64■□□□□ 0.25
SMPDL3B-204ENST00000466793 POTECB2RU33 542 aa16.63■□□□□ 0.25
SMPDL3B-204ENST00000466793 SERPINB2P05120 415 aa16.63■□□□□ 0.25
SMPDL3B-204ENST00000466793 ZNF790Q6PG37 636 aa16.63■□□□□ 0.25
SMPDL3B-204ENST00000466793 BICDL1Q6ZP65 573 aa16.63■□□□□ 0.25
SMPDL3B-204ENST00000466793 DLEC1Q9Y238 1755 aa16.63■□□□□ 0.25
SMPDL3B-204ENST00000466793 NBPF26B4DH59 902 aa16.62■□□□□ 0.25
SMPDL3B-204ENST00000466793 NFKBIEO00221 500 aa16.62■□□□□ 0.25
SMPDL3B-204ENST00000466793 NBPF10Q6P3W6 841 aaKnown RBP16.62■□□□□ 0.25
SMPDL3B-204ENST00000466793 MCM10Q7L590 875 aa16.62■□□□□ 0.25
SMPDL3B-204ENST00000466793 NBPF15Q8N660 670 aa16.62■□□□□ 0.25
SMPDL3B-204ENST00000466793 PIM2Q9P1W9 311 aa16.62■□□□□ 0.25
SMPDL3B-204ENST00000466793 CAMTA2O94983 1202 aa16.61■□□□□ 0.25
SMPDL3B-204ENST00000466793 MIS18AQ9NYP9 233 aa16.61■□□□□ 0.25
SMPDL3B-204ENST00000466793 SCN7AQ01118 1682 aa16.61■□□□□ 0.25
SMPDL3B-204ENST00000466793 VSIG10Q8N0Z9 540 aa16.6■□□□□ 0.25
SMPDL3B-204ENST00000466793 GNAT3A8MTJ3 354 aa16.59■□□□□ 0.25
SMPDL3B-204ENST00000466793 DALRD3Q5D0E6 543 aaKnown RBP16.59■□□□□ 0.25
SMPDL3B-204ENST00000466793 PRR5LQ6MZQ0 368 aa16.58■□□□□ 0.24
SMPDL3B-204ENST00000466793 OLFM4Q6UX06 510 aa16.58■□□□□ 0.24
SMPDL3B-204ENST00000466793 RRAGCQ9HB90 399 aa16.58■□□□□ 0.24
SMPDL3B-204ENST00000466793 SLX4Q8IY92 1834 aa16.57■□□□□ 0.24
SMPDL3B-204ENST00000466793 ZPR1O75312 459 aa16.57■□□□□ 0.24
SMPDL3B-204ENST00000466793 HMGB2P26583 209 aaKnown RBP16.57■□□□□ 0.24
SMPDL3B-204ENST00000466793 THUMPD2Q9BTF0 503 aaKnown RBP16.57■□□□□ 0.24
SMPDL3B-204ENST00000466793 RNF181Q9P0P0 153 aa16.57■□□□□ 0.24
SMPDL3B-204ENST00000466793 CCDC88AQ3V6T2 1871 aa16.56■□□□□ 0.24
SMPDL3B-204ENST00000466793 BCORQ6W2J9 1755 aa16.56■□□□□ 0.24
SMPDL3B-204ENST00000466793 C2CD5Q86YS7 1000 aa16.55■□□□□ 0.24
SMPDL3B-204ENST00000466793 PLEKHF1Q96S99 279 aa16.55■□□□□ 0.24
SMPDL3B-204ENST00000466793 ZNF219Q9P2Y4 722 aaPredicted RBP16.55■□□□□ 0.24
SMPDL3B-204ENST00000466793 TOMM70O94826 608 aa16.54■□□□□ 0.24
SMPDL3B-204ENST00000466793 HLFQ16534 295 aa16.54■□□□□ 0.24
SMPDL3B-204ENST00000466793 POTEIP0CG38 1075 aa16.53■□□□□ 0.24
SMPDL3B-204ENST00000466793 POTEJP0CG39 1038 aa16.53■□□□□ 0.24
SMPDL3B-204ENST00000466793 ZNF330Q9Y3S2 320 aaPredicted RBP16.53■□□□□ 0.24
SMPDL3B-204ENST00000466793 DLG5Q8TDM6 1919 aa16.53■□□□□ 0.24
SMPDL3B-204ENST00000466793 BTBD11A6QL63 1104 aa16.52■□□□□ 0.24
SMPDL3B-204ENST00000466793 GAS2L2Q8NHY3 880 aa16.52■□□□□ 0.24
SMPDL3B-204ENST00000466793 C7orf43Q8WVR3 580 aa16.52■□□□□ 0.24
SMPDL3B-204ENST00000466793 CACNA1SQ13698 1873 aa16.52■□□□□ 0.23
SMPDL3B-204ENST00000466793 FER1L6Q2WGJ9 1857 aa16.52■□□□□ 0.23
SMPDL3B-204ENST00000466793 WDR90Q96KV7 1748 aa16.51■□□□□ 0.23
SMPDL3B-204ENST00000466793 TNRC6CQ9HCJ0 1690 aaKnown RBP16.51■□□□□ 0.23
SMPDL3B-204ENST00000466793 C21orf2O43822 256 aa16.51■□□□□ 0.23
SMPDL3B-204ENST00000466793 U2AF1L5P0DN76 240 aaPredicted RBP16.51■□□□□ 0.23
SMPDL3B-204ENST00000466793 IL6STP40189 918 aaPredicted RBP16.51■□□□□ 0.23
SMPDL3B-204ENST00000466793 U2AF1Q01081 240 aaKnown RBP eCLIP16.51■□□□□ 0.23
SMPDL3B-204ENST00000466793 TEFQ10587 303 aa16.51■□□□□ 0.23
SMPDL3B-204ENST00000466793 TIAM2Q8IVF5 1701 aa16.5■□□□□ 0.23
SMPDL3B-204ENST00000466793 COL4A5P29400 1685 aa16.5■□□□□ 0.23
SMPDL3B-204ENST00000466793 TTC5Q8N0Z6 440 aa16.49■□□□□ 0.23
SMPDL3B-204ENST00000466793 TTLL6Q8N841 843 aa16.49■□□□□ 0.23
SMPDL3B-204ENST00000466793 SNED1Q8TER0 1413 aa16.49■□□□□ 0.23
SMPDL3B-204ENST00000466793 FMNL2Q96PY5 1086 aa16.49■□□□□ 0.23
SMPDL3B-204ENST00000466793 STARD3NLO95772 234 aa16.48■□□□□ 0.23
SMPDL3B-204ENST00000466793 SRGNP10124 158 aa16.48■□□□□ 0.23
SMPDL3B-204ENST00000466793 IFFO2Q5TF58 517 aa16.48■□□□□ 0.23
SMPDL3B-204ENST00000466793 C3orf67Q6ZVT6 689 aa16.48■□□□□ 0.23
SMPDL3B-204ENST00000466793 LRP10Q7Z4F1 713 aa16.48■□□□□ 0.23
SMPDL3B-204ENST00000466793 DZIP3Q86Y13 1208 aaKnown RBP16.48■□□□□ 0.23
SMPDL3B-204ENST00000466793 KDM3BQ7LBC6 1761 aa16.47■□□□□ 0.23
SMPDL3B-204ENST00000466793 RBM46Q8TBY0 533 aaKnown RBP16.47■□□□□ 0.23
SMPDL3B-204ENST00000466793 BRIP1Q9BX63 1249 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms