RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 BLOC1S2Q6QNY1 142 aa10.19□□□□□ -0.78
HPS4-209ENST00000466781 WDR33Q9C0J8 1336 aaKnown RBP10.19□□□□□ -0.78
HPS4-209ENST00000466781 NFE2L2Q16236 605 aa10.19□□□□□ -0.78
HPS4-209ENST00000466781 ZNF397Q8NF99 534 aaPredicted RBP10.19□□□□□ -0.78
HPS4-209ENST00000466781 WDR78Q5VTH9 848 aa10.19□□□□□ -0.78
HPS4-209ENST00000466781 CCDC91Q7Z6B0 441 aa10.19□□□□□ -0.78
HPS4-209ENST00000466781 KIAA1328Q86T90 577 aa10.19□□□□□ -0.78
HPS4-209ENST00000466781 THUMPD2Q9BTF0 503 aaKnown RBP10.19□□□□□ -0.78
HPS4-209ENST00000466781 MYO5CQ9NQX4 1742 aa10.19□□□□□ -0.78
HPS4-209ENST00000466781 PTCD1O75127 700 aaKnown RBP10.19□□□□□ -0.78
HPS4-209ENST00000466781 ERLIN1O75477 346 aa10.19□□□□□ -0.78
HPS4-209ENST00000466781 KRT32Q14532 448 aa10.19□□□□□ -0.78
HPS4-209ENST00000466781 LARP1BQ659C4 914 aaKnown RBP10.19□□□□□ -0.78
HPS4-209ENST00000466781 DRC1Q96MC2 740 aa10.19□□□□□ -0.78
HPS4-209ENST00000466781 NEO1Q92859 1461 aa10.19□□□□□ -0.78
HPS4-209ENST00000466781 EIF5P55010 431 aaKnown RBP10.19□□□□□ -0.78
HPS4-209ENST00000466781 CHRNA2Q15822 529 aa10.19□□□□□ -0.78
HPS4-209ENST00000466781 TSG101Q99816 390 aa10.19□□□□□ -0.78
HPS4-209ENST00000466781 ABCF2Q9UG63 623 aa10.19□□□□□ -0.78
HPS4-209ENST00000466781 PPIP5K1Q6PFW1 1433 aa10.18□□□□□ -0.78
HPS4-209ENST00000466781 CCDC184Q52MB2 194 aa10.18□□□□□ -0.78
HPS4-209ENST00000466781 RPGRQ92834 1020 aaKnown RBP10.18□□□□□ -0.78
HPS4-209ENST00000466781 MKNK2Q9HBH9 465 aa10.18□□□□□ -0.78
HPS4-209ENST00000466781 AKAP2Q9Y2D5 859 aa10.18□□□□□ -0.78
HPS4-209ENST00000466781 DZIP1Q86YF9 867 aaKnown RBP10.18□□□□□ -0.78
HPS4-209ENST00000466781 TTC21BQ7Z4L5 1316 aa10.18□□□□□ -0.78
HPS4-209ENST00000466781 TRAK2O60296 914 aa10.18□□□□□ -0.78
HPS4-209ENST00000466781 MTERF4Q7Z6M4 381 aaKnown RBP10.18□□□□□ -0.78
HPS4-209ENST00000466781 TTC21AQ8NDW8 1320 aa10.18□□□□□ -0.78
HPS4-209ENST00000466781 SHANK2Q9UPX8 1470 aa10.18□□□□□ -0.78
HPS4-209ENST00000466781 SRGAP3O43295 1099 aa10.18□□□□□ -0.78
HPS4-209ENST00000466781 SPATA32Q96LK8 384 aa10.18□□□□□ -0.78
HPS4-209ENST00000466781 ZSCAN31Q96LW9 406 aaPredicted RBP10.18□□□□□ -0.78
HPS4-209ENST00000466781 C19orf44Q9H6X5 657 aa10.18□□□□□ -0.78
HPS4-209ENST00000466781 EIF3JO75822 258 aaKnown RBP10.18□□□□□ -0.78
HPS4-209ENST00000466781 CCDC96Q2M329 555 aa10.18□□□□□ -0.78
HPS4-209ENST00000466781 CFAP45Q9UL16 551 aa10.18□□□□□ -0.78
HPS4-209ENST00000466781 EIF2AK4Q9P2K8 1649 aaKnown RBP10.17□□□□□ -0.78
HPS4-209ENST00000466781 EPB41L2O43491 1005 aaKnown RBP10.17□□□□□ -0.78
HPS4-209ENST00000466781 WDR63Q8IWG1 891 aa10.17□□□□□ -0.78
HPS4-209ENST00000466781 LRRC59Q96AG4 307 aaKnown RBP10.17□□□□□ -0.78
HPS4-209ENST00000466781 FAM193AP78312 1265 aa10.17□□□□□ -0.78
HPS4-209ENST00000466781 JAKMIP1Q96N16 626 aaKnown RBP10.17□□□□□ -0.78
HPS4-209ENST00000466781 MAST1Q9Y2H9 1570 aa10.17□□□□□ -0.78
HPS4-209ENST00000466781 A0A087WZG4 1122 aa10.17□□□□□ -0.78
HPS4-209ENST00000466781 CCDC66A2RUB6 948 aa10.17□□□□□ -0.78
HPS4-209ENST00000466781 SMTNL1A8MU46 457 aa10.17□□□□□ -0.78
HPS4-209ENST00000466781 NFKBIBQ15653 356 aa10.17□□□□□ -0.78
HPS4-209ENST00000466781 IFIT1P09914 478 aaKnown RBP10.17□□□□□ -0.78
HPS4-209ENST00000466781 CWC27Q6UX04 472 aaKnown RBP10.17□□□□□ -0.78
HPS4-209ENST00000466781 SLF2Q8IX21 1173 aa10.17□□□□□ -0.78
HPS4-209ENST00000466781 IFNL2Q8IZJ0 200 aa10.16□□□□□ -0.78
HPS4-209ENST00000466781 FAM177A1Q8N128 213 aaPredicted RBP10.16□□□□□ -0.78
HPS4-209ENST00000466781 LRRFIP2Q9Y608 721 aaKnown RBP10.16□□□□□ -0.78
HPS4-209ENST00000466781 EMILIN1Q9Y6C2 1016 aa10.16□□□□□ -0.78
HPS4-209ENST00000466781 NSD2O96028 1365 aa10.16□□□□□ -0.78
HPS4-209ENST00000466781 FANCIQ9NVI1 1328 aa10.16□□□□□ -0.78
HPS4-209ENST00000466781 HSP90AB3PQ58FF7 597 aa10.16□□□□□ -0.78
HPS4-209ENST00000466781 TAF7Q15545 349 aaPredicted RBP10.15□□□□□ -0.78
HPS4-209ENST00000466781 UBA5Q9GZZ9 404 aa10.15□□□□□ -0.78
HPS4-209ENST00000466781 TCOF1Q13428 1488 aaKnown RBP10.15□□□□□ -0.78
HPS4-209ENST00000466781 RFC4P35249 363 aa10.15□□□□□ -0.78
HPS4-209ENST00000466781 CCDC148Q8NFR7 591 aa10.15□□□□□ -0.78
HPS4-209ENST00000466781 TEX13AQ9BXU3 409 aaPredicted RBP10.15□□□□□ -0.78
HPS4-209ENST00000466781 FERMT2Q96AC1 680 aa10.15□□□□□ -0.78
HPS4-209ENST00000466781 MINDY4BA8MYZ0 360 aa10.15□□□□□ -0.78
HPS4-209ENST00000466781 K7ELQ4 463 aaPredicted RBP10.15□□□□□ -0.79
HPS4-209ENST00000466781 STAMBPO95630 424 aa10.15□□□□□ -0.79
HPS4-209ENST00000466781 ZNF444Q8N0Y2 327 aaPredicted RBP10.15□□□□□ -0.79
HPS4-209ENST00000466781 SLC5A1P13866 664 aa10.14□□□□□ -0.79
HPS4-209ENST00000466781 TMEM266Q2M3C6 531 aa10.14□□□□□ -0.79
HPS4-209ENST00000466781 ST5P78524 1137 aa10.14□□□□□ -0.79
HPS4-209ENST00000466781 FKBP15Q5T1M5 1219 aa10.14□□□□□ -0.79
HPS4-209ENST00000466781 UPF3BQ9BZI7 483 aaKnown RBP10.14□□□□□ -0.79
HPS4-209ENST00000466781 ACSBG1Q96GR2 724 aa10.14□□□□□ -0.79
HPS4-209ENST00000466781 TRPM2O94759 1503 aa10.14□□□□□ -0.79
HPS4-209ENST00000466781 ABCC1P33527 1531 aa10.14□□□□□ -0.79
HPS4-209ENST00000466781 HMGN5P82970 282 aaKnown RBP10.14□□□□□ -0.79
HPS4-209ENST00000466781 NBPF14Q5TI25 921 aa10.14□□□□□ -0.79
HPS4-209ENST00000466781 ZNF219Q9P2Y4 722 aaPredicted RBP10.14□□□□□ -0.79
HPS4-209ENST00000466781 PDE3AQ14432 1141 aa10.14□□□□□ -0.79
HPS4-209ENST00000466781 ZCRB1Q8TBF4 217 aaKnown RBP10.14□□□□□ -0.79
HPS4-209ENST00000466781 MPHOSPH6Q99547 160 aaKnown RBP10.14□□□□□ -0.79
HPS4-209ENST00000466781 INCENPQ9NQS7 918 aa10.14□□□□□ -0.79
HPS4-209ENST00000466781 DNMT1P26358 1616 aaKnown RBP10.13□□□□□ -0.79
HPS4-209ENST00000466781 FBLN1P23142 703 aa10.13□□□□□ -0.79
HPS4-209ENST00000466781 MYD88Q99836 296 aa10.13□□□□□ -0.79
HPS4-209ENST00000466781 RAB34Q9BZG1 259 aa10.13□□□□□ -0.79
HPS4-209ENST00000466781 NUP62CLQ9H1M0 184 aa10.13□□□□□ -0.79
HPS4-209ENST00000466781 SPA17Q15506 151 aa10.13□□□□□ -0.79
HPS4-209ENST00000466781 PHAXQ9H814 394 aaKnown RBP10.13□□□□□ -0.79
HPS4-209ENST00000466781 ZCCHC11Q5TAX3 1644 aaKnown RBP10.13□□□□□ -0.79
HPS4-209ENST00000466781 COMMD10Q9Y6G5 202 aa10.13□□□□□ -0.79
HPS4-209ENST00000466781 LIG1P18858 919 aa10.13□□□□□ -0.79
HPS4-209ENST00000466781 FGFR1OPO95684 399 aaKnown RBP10.13□□□□□ -0.79
HPS4-209ENST00000466781 CA8P35219 290 aa10.13□□□□□ -0.79
HPS4-209ENST00000466781 TMPOP42166 694 aaKnown RBP10.13□□□□□ -0.79
HPS4-209ENST00000466781 DDB1Q16531 1140 aa10.13□□□□□ -0.79
HPS4-209ENST00000466781 VPS36Q86VN1 386 aa10.13□□□□□ -0.79
HPS4-209ENST00000466781 CHD1LQ86WJ1 897 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms