RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 KCNQ2O43526 872 aa19.26■□□□□ 0.67
SNED1-208ENST00000466618 GZF1Q9H116 711 aaPredicted RBP19.26■□□□□ 0.67
SNED1-208ENST00000466618 MYH16Q9H6N6 1097 aa19.26■□□□□ 0.67
SNED1-208ENST00000466618 TSR2Q969E8 191 aaKnown RBP19.25■□□□□ 0.67
SNED1-208ENST00000466618 TBC1D32Q96NH3 1257 aa19.25■□□□□ 0.67
SNED1-208ENST00000466618 DOT1LQ8TEK3 1739 aa19.25■□□□□ 0.67
SNED1-208ENST00000466618 TSPYL4Q9UJ04 414 aa19.25■□□□□ 0.67
SNED1-208ENST00000466618 BCAR3O75815 825 aa19.24■□□□□ 0.67
SNED1-208ENST00000466618 MRE11P49959 708 aa19.24■□□□□ 0.67
SNED1-208ENST00000466618 PTF1AQ7RTS3 328 aa19.23■□□□□ 0.67
SNED1-208ENST00000466618 KCNQ3O43525 872 aa19.23■□□□□ 0.67
SNED1-208ENST00000466618 ZNF790Q6PG37 636 aa19.23■□□□□ 0.67
SNED1-208ENST00000466618 SYTL4Q96C24 671 aaPredicted RBP19.23■□□□□ 0.67
SNED1-208ENST00000466618 ESPNB1AK53 854 aa19.22■□□□□ 0.67
SNED1-208ENST00000466618 SLC39A6Q13433 755 aa19.22■□□□□ 0.67
SNED1-208ENST00000466618 BCL11BQ9C0K0 894 aaPredicted RBP19.21■□□□□ 0.67
SNED1-208ENST00000466618 ATG3Q9NT62 314 aa19.21■□□□□ 0.67
SNED1-208ENST00000466618 NHSQ6T4R5 1651 aa19.21■□□□□ 0.67
SNED1-208ENST00000466618 TRAK2O60296 914 aa19.2■□□□□ 0.66
SNED1-208ENST00000466618 EIF4A1P60842 406 aaKnown RBP19.2■□□□□ 0.66
SNED1-208ENST00000466618 ASAP1Q9ULH1 1129 aa19.2■□□□□ 0.66
SNED1-208ENST00000466618 ITGB4P16144 1822 aa19.2■□□□□ 0.66
SNED1-208ENST00000466618 HEG1Q9ULI3 1381 aa19.2■□□□□ 0.66
SNED1-208ENST00000466618 PAPPAQ13219 1627 aa19.2■□□□□ 0.66
SNED1-208ENST00000466618 KDM3BQ7LBC6 1761 aa19.19■□□□□ 0.66
SNED1-208ENST00000466618 GRPEL1Q9HAV7 217 aa19.19■□□□□ 0.66
SNED1-208ENST00000466618 CLUAP1Q96AJ1 413 aa19.19■□□□□ 0.66
SNED1-208ENST00000466618 SBF2Q86WG5 1849 aa19.17■□□□□ 0.66
SNED1-208ENST00000466618 KCPQ6ZWJ8 1503 aa19.17■□□□□ 0.66
SNED1-208ENST00000466618 TRIM37O94972 964 aa19.17■□□□□ 0.66
SNED1-208ENST00000466618 EXOSC9Q06265 439 aaKnown RBP19.17■□□□□ 0.66
SNED1-208ENST00000466618 KRT24Q2M2I5 525 aa19.17■□□□□ 0.66
SNED1-208ENST00000466618 C8orf58Q8NAV2 365 aa19.17■□□□□ 0.66
SNED1-208ENST00000466618 ZNF496Q96IT1 587 aaPredicted RBP19.17■□□□□ 0.66
SNED1-208ENST00000466618 TTC5Q8N0Z6 440 aa19.16■□□□□ 0.66
SNED1-208ENST00000466618 SPRYD3Q8NCJ5 442 aa19.16■□□□□ 0.66
SNED1-208ENST00000466618 UPF2Q9HAU5 1272 aaKnown RBP19.16■□□□□ 0.66
SNED1-208ENST00000466618 TPM2P07951 284 aa19.16■□□□□ 0.66
SNED1-208ENST00000466618 PDE3AQ14432 1141 aa19.15■□□□□ 0.66
SNED1-208ENST00000466618 TSPYL6Q8N831 410 aa19.15■□□□□ 0.66
SNED1-208ENST00000466618 FMNL2Q96PY5 1086 aa19.15■□□□□ 0.66
SNED1-208ENST00000466618 CHMP5Q9NZZ3 219 aa19.15■□□□□ 0.66
SNED1-208ENST00000466618 UBR2Q8IWV8 1755 aa19.14■□□□□ 0.65
SNED1-208ENST00000466618 GIGYF1O75420 1035 aaPredicted RBP19.14■□□□□ 0.65
SNED1-208ENST00000466618 SMARCC1Q92922 1105 aaPredicted RBP19.14■□□□□ 0.65
SNED1-208ENST00000466618 PALLDQ8WX93 1383 aa19.13■□□□□ 0.65
SNED1-208ENST00000466618 SLC4A9Q96Q91 983 aa19.13■□□□□ 0.65
SNED1-208ENST00000466618 PDCL3Q9H2J4 239 aa19.13■□□□□ 0.65
SNED1-208ENST00000466618 ISY1Q9ULR0 285 aaKnown RBP19.13■□□□□ 0.65
SNED1-208ENST00000466618 PTCD1O75127 700 aaKnown RBP19.13■□□□□ 0.65
SNED1-208ENST00000466618 VAMP4O75379 141 aa19.13■□□□□ 0.65
SNED1-208ENST00000466618 SOS1Q07889 1333 aaPredicted RBP19.12■□□□□ 0.65
SNED1-208ENST00000466618 HOXB7P09629 217 aa19.12■□□□□ 0.65
SNED1-208ENST00000466618 PANK1Q8TE04 598 aa19.12■□□□□ 0.65
SNED1-208ENST00000466618 COG6Q9Y2V7 657 aa19.12■□□□□ 0.65
SNED1-208ENST00000466618 BTAF1O14981 1849 aa19.12■□□□□ 0.65
SNED1-208ENST00000466618 CT47B1P0C2W7 299 aaPredicted RBP19.12■□□□□ 0.65
SNED1-208ENST00000466618 TWISTNBQ3B726 338 aaPredicted RBP19.12■□□□□ 0.65
SNED1-208ENST00000466618 PRAMEF22A3QJZ6 481 aa19.1■□□□□ 0.65
SNED1-208ENST00000466618 ELL2O00472 640 aaPredicted RBP19.1■□□□□ 0.65
SNED1-208ENST00000466618 SNRPA1P09661 255 aaKnown RBP19.1■□□□□ 0.65
SNED1-208ENST00000466618 LOC102724428A0A0B4J2F2 783 aa19.1■□□□□ 0.65
SNED1-208ENST00000466618 SIK1P57059 783 aa19.1■□□□□ 0.65
SNED1-208ENST00000466618 RBM42Q9BTD8 480 aaKnown RBP19.09■□□□□ 0.65
SNED1-208ENST00000466618 PLSCR1O15162 318 aa19.09■□□□□ 0.65
SNED1-208ENST00000466618 DDX11L8A8MPP1 907 aa19.08■□□□□ 0.65
SNED1-208ENST00000466618 ZNF428Q96B54 188 aa19.08■□□□□ 0.64
SNED1-208ENST00000466618 PDZRN3Q9UPQ7 1066 aa19.08■□□□□ 0.64
SNED1-208ENST00000466618 USP16Q9Y5T5 823 aa19.08■□□□□ 0.64
SNED1-208ENST00000466618 APBA3O96018 575 aa19.07■□□□□ 0.64
SNED1-208ENST00000466618 GAS2L3Q86XJ1 694 aa19.07■□□□□ 0.64
SNED1-208ENST00000466618 TNS1Q9HBL0 1735 aaKnown RBP19.06■□□□□ 0.64
SNED1-208ENST00000466618 TRIM44Q96DX7 344 aaPredicted RBP19.06■□□□□ 0.64
SNED1-208ENST00000466618 PCDHB15Q9Y5E8 787 aa19.06■□□□□ 0.64
SNED1-208ENST00000466618 KAT6BQ8WYB5 2073 aa19.06■□□□□ 0.64
SNED1-208ENST00000466618 PODXL2Q9NZ53 605 aa19.06■□□□□ 0.64
SNED1-208ENST00000466618 CICQ96RK0 1608 aaPredicted RBP19.06■□□□□ 0.64
SNED1-208ENST00000466618 ZNF831Q5JPB2 1677 aa19.05■□□□□ 0.64
SNED1-208ENST00000466618 ITPK1Q13572 414 aa19.05■□□□□ 0.64
SNED1-208ENST00000466618 DNAJC10Q8IXB1 793 aa19.05■□□□□ 0.64
SNED1-208ENST00000466618 TEX13AQ9BXU3 409 aaPredicted RBP19.05■□□□□ 0.64
SNED1-208ENST00000466618 ATP6V1AP38606 617 aa19.05■□□□□ 0.64
SNED1-208ENST00000466618 RARSP54136 660 aaKnown RBP19.05■□□□□ 0.64
SNED1-208ENST00000466618 KIAA1211Q6ZU35 1233 aa19.05■□□□□ 0.64
SNED1-208ENST00000466618 PROM2Q8N271 834 aa19.05■□□□□ 0.64
SNED1-208ENST00000466618 PRDM4Q9UKN5 801 aa19.05■□□□□ 0.64
SNED1-208ENST00000466618 DDIT3P35638 169 aa19.04■□□□□ 0.64
SNED1-208ENST00000466618 HDGFL1Q5TGJ6 251 aa19.04■□□□□ 0.64
SNED1-208ENST00000466618 LY75O60449 1722 aa19.04■□□□□ 0.64
SNED1-208ENST00000466618 C5P01031 1676 aa19.04■□□□□ 0.64
SNED1-208ENST00000466618 CYP19A1P11511 503 aaPredicted RBP19.03■□□□□ 0.64
SNED1-208ENST00000466618 CANXP27824 592 aaKnown RBP19.03■□□□□ 0.64
SNED1-208ENST00000466618 ALDH1L2Q3SY69 923 aa19.03■□□□□ 0.64
SNED1-208ENST00000466618 ILDR2Q71H61 639 aa19.03■□□□□ 0.64
SNED1-208ENST00000466618 CCDC125Q86Z20 511 aa19.03■□□□□ 0.64
SNED1-208ENST00000466618 C22orf23Q9BZE7 217 aa19.03■□□□□ 0.64
SNED1-208ENST00000466618 LRRC4BQ9NT99 713 aa19.03■□□□□ 0.64
SNED1-208ENST00000466618 TJP1Q07157 1748 aa19.03■□□□□ 0.64
SNED1-208ENST00000466618 EIF2S2P20042 333 aaKnown RBP19.02■□□□□ 0.64
SNED1-208ENST00000466618 SLC27A3Q5K4L6 730 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms