RNA–Protein interactions for RNA: ENST00000466543.1

CYTH3-205, Transcript of cytohesin 3, humanhuman

TSL 4

Gene CYTH3, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-205ENST00000466543 BCL2L12Q9HB09 334 aa23.31■■□□□ 1.32
CYTH3-205ENST00000466543 SIPA1L3O60292 1781 aaPredicted RBP23.31■■□□□ 1.32
CYTH3-205ENST00000466543 COL15A1P39059 1388 aa23.3■■□□□ 1.32
CYTH3-205ENST00000466543 NRXN2Q9P2S2 1712 aa23.3■■□□□ 1.32
CYTH3-205ENST00000466543 HSPA6P17066 643 aa23.29■■□□□ 1.32
CYTH3-205ENST00000466543 NFIXQ14938 502 aa23.29■■□□□ 1.32
CYTH3-205ENST00000466543 IL17REQ8NFR9 667 aa23.29■■□□□ 1.32
CYTH3-205ENST00000466543 PIM2Q9P1W9 311 aa23.29■■□□□ 1.32
CYTH3-205ENST00000466543 U2SURPO15042 1029 aaKnown RBP23.28■■□□□ 1.32
CYTH3-205ENST00000466543 ZPR1O75312 459 aa23.28■■□□□ 1.32
CYTH3-205ENST00000466543 NARFQ9UHQ1 456 aa23.28■■□□□ 1.32
CYTH3-205ENST00000466543 VSIG10Q8N0Z9 540 aa23.27■■□□□ 1.32
CYTH3-205ENST00000466543 DALRD3Q5D0E6 543 aaKnown RBP23.26■■□□□ 1.31
CYTH3-205ENST00000466543 C9orf131Q5VYM1 1079 aa23.26■■□□□ 1.31
CYTH3-205ENST00000466543 NMRK2Q9NPI5 230 aa23.26■■□□□ 1.31
CYTH3-205ENST00000466543 SBF1O95248 1867 aa23.26■■□□□ 1.31
CYTH3-205ENST00000466543 CANXP27824 592 aaKnown RBP23.25■■□□□ 1.31
CYTH3-205ENST00000466543 ZNF496Q96IT1 587 aaPredicted RBP23.25■■□□□ 1.31
CYTH3-205ENST00000466543 PHACTR3Q96KR7 559 aa23.24■■□□□ 1.31
CYTH3-205ENST00000466543 DLEC1Q9Y238 1755 aa23.24■■□□□ 1.31
CYTH3-205ENST00000466543 CARMIL3Q8ND23 1372 aa23.23■■□□□ 1.31
CYTH3-205ENST00000466543 GNAT3A8MTJ3 354 aa23.22■■□□□ 1.31
CYTH3-205ENST00000466543 EIF5P55010 431 aaKnown RBP23.22■■□□□ 1.31
CYTH3-205ENST00000466543 ZNF790Q6PG37 636 aa23.21■■□□□ 1.31
CYTH3-205ENST00000466543 GAS2L2Q8NHY3 880 aa23.21■■□□□ 1.31
CYTH3-205ENST00000466543 HEG1Q9ULI3 1381 aa23.21■■□□□ 1.31
CYTH3-205ENST00000466543 SCN7AQ01118 1682 aa23.2■■□□□ 1.3
CYTH3-205ENST00000466543 CEMIPQ8WUJ3 1361 aa23.2■■□□□ 1.3
CYTH3-205ENST00000466543 KCNQ3O43525 872 aa23.2■■□□□ 1.3
CYTH3-205ENST00000466543 SERPINB2P05120 415 aa23.2■■□□□ 1.3
CYTH3-205ENST00000466543 TEFQ10587 303 aa23.2■■□□□ 1.3
CYTH3-205ENST00000466543 TTC5Q8N0Z6 440 aa23.2■■□□□ 1.3
CYTH3-205ENST00000466543 RSPH6AQ9H0K4 717 aa23.2■■□□□ 1.3
CYTH3-205ENST00000466543 ANKRD31Q8N7Z5 1873 aa23.19■■□□□ 1.3
CYTH3-205ENST00000466543 STARD3NLO95772 234 aa23.18■■□□□ 1.3
CYTH3-205ENST00000466543 PRKAR2BP31323 418 aa23.18■■□□□ 1.3
CYTH3-205ENST00000466543 PRELPP51888 382 aa23.18■■□□□ 1.3
CYTH3-205ENST00000466543 BICDL1Q6ZP65 573 aa23.18■■□□□ 1.3
CYTH3-205ENST00000466543 RNF181Q9P0P0 153 aa23.18■■□□□ 1.3
CYTH3-205ENST00000466543 TOMM70O94826 608 aa23.17■■□□□ 1.3
CYTH3-205ENST00000466543 RASSF7Q02833 373 aa23.17■■□□□ 1.3
CYTH3-205ENST00000466543 TBC1D9BQ66K14 1250 aa23.16■■□□□ 1.3
CYTH3-205ENST00000466543 A1BGP04217 495 aa23.15■■□□□ 1.3
CYTH3-205ENST00000466543 TBC1D2BQ9UPU7 963 aa23.15■■□□□ 1.3
CYTH3-205ENST00000466543 COL11A2P13942 1736 aaPredicted RBP23.15■■□□□ 1.3
CYTH3-205ENST00000466543 PPP2R1AP30153 589 aa23.13■■□□□ 1.29
CYTH3-205ENST00000466543 C2CD5Q86YS7 1000 aa23.13■■□□□ 1.29
CYTH3-205ENST00000466543 CCDC24Q8N4L8 307 aa23.13■■□□□ 1.29
CYTH3-205ENST00000466543 ZNF330Q9Y3S2 320 aaPredicted RBP23.13■■□□□ 1.29
CYTH3-205ENST00000466543 CCDC88AQ3V6T2 1871 aa23.13■■□□□ 1.29
CYTH3-205ENST00000466543 A0A087WZG4 1122 aa23.12■■□□□ 1.29
CYTH3-205ENST00000466543 PRAMEF22A3QJZ6 481 aa23.12■■□□□ 1.29
CYTH3-205ENST00000466543 FMNL2Q96PY5 1086 aa23.12■■□□□ 1.29
CYTH3-205ENST00000466543 BCORQ6W2J9 1755 aa23.12■■□□□ 1.29
CYTH3-205ENST00000466543 BTBD11A6QL63 1104 aa23.11■■□□□ 1.29
CYTH3-205ENST00000466543 IL6STP40189 918 aaPredicted RBP23.11■■□□□ 1.29
CYTH3-205ENST00000466543 PIP4K2AP48426 406 aaPredicted RBP23.11■■□□□ 1.29
CYTH3-205ENST00000466543 CFAP53Q96M91 514 aa23.11■■□□□ 1.29
CYTH3-205ENST00000466543 TEX13AQ9BXU3 409 aaPredicted RBP23.11■■□□□ 1.29
CYTH3-205ENST00000466543 TNRC6CQ9HCJ0 1690 aaKnown RBP23.1■■□□□ 1.29
CYTH3-205ENST00000466543 DNAJC5GQ8N7S2 189 aa23.1■■□□□ 1.29
CYTH3-205ENST00000466543 TTLL6Q8N841 843 aa23.1■■□□□ 1.29
CYTH3-205ENST00000466543 RRAGCQ9HB90 399 aa23.1■■□□□ 1.29
CYTH3-205ENST00000466543 USP16Q9Y5T5 823 aa23.1■■□□□ 1.29
CYTH3-205ENST00000466543 NFKBIEO00221 500 aa23.09■■□□□ 1.29
CYTH3-205ENST00000466543 CAMTA2O94983 1202 aa23.09■■□□□ 1.29
CYTH3-205ENST00000466543 U2AF1L5P0DN76 240 aaPredicted RBP23.09■■□□□ 1.29
CYTH3-205ENST00000466543 APLP1P51693 650 aa23.09■■□□□ 1.29
CYTH3-205ENST00000466543 U2AF1Q01081 240 aaKnown RBP eCLIP23.09■■□□□ 1.29
CYTH3-205ENST00000466543 PRR5LQ6MZQ0 368 aa23.09■■□□□ 1.29
CYTH3-205ENST00000466543 MCM10Q7L590 875 aa23.09■■□□□ 1.29
CYTH3-205ENST00000466543 KDM2BQ8NHM5 1336 aa23.08■■□□□ 1.29
CYTH3-205ENST00000466543 TIAM2Q8IVF5 1701 aa23.08■■□□□ 1.29
CYTH3-205ENST00000466543 WDR90Q96KV7 1748 aa23.08■■□□□ 1.29
CYTH3-205ENST00000466543 H0YIN7 160 aa23.08■■□□□ 1.29
CYTH3-205ENST00000466543 DCTN1Q14203 1278 aa23.08■■□□□ 1.29
CYTH3-205ENST00000466543 RBM46Q8TBY0 533 aaKnown RBP23.08■■□□□ 1.29
CYTH3-205ENST00000466543 LMNB1P20700 586 aa23.06■■□□□ 1.28
CYTH3-205ENST00000466543 HTRA3P83110 453 aa23.06■■□□□ 1.28
CYTH3-205ENST00000466543 NUDCQ9Y266 331 aa23.06■■□□□ 1.28
CYTH3-205ENST00000466543 BRIP1Q9BX63 1249 aa23.05■■□□□ 1.28
CYTH3-205ENST00000466543 CACNA1SQ13698 1873 aa23.05■■□□□ 1.28
CYTH3-205ENST00000466543 FER1L6Q2WGJ9 1857 aa23.05■■□□□ 1.28
CYTH3-205ENST00000466543 ZNF622Q969S3 477 aaKnown RBP eCLIP23.04■■□□□ 1.28
CYTH3-205ENST00000466543 SLX4Q8IY92 1834 aa23.03■■□□□ 1.28
CYTH3-205ENST00000466543 IFFO2Q5TF58 517 aa23.03■■□□□ 1.28
CYTH3-205ENST00000466543 DZIP3Q86Y13 1208 aaKnown RBP23.03■■□□□ 1.28
CYTH3-205ENST00000466543 C16orf71Q8IYS4 520 aaPredicted RBP23.03■■□□□ 1.28
CYTH3-205ENST00000466543 ZNF219Q9P2Y4 722 aaPredicted RBP23.03■■□□□ 1.28
CYTH3-205ENST00000466543 DLG5Q8TDM6 1919 aa23.02■■□□□ 1.28
CYTH3-205ENST00000466543 NBPF26B4DH59 902 aa23.02■■□□□ 1.28
CYTH3-205ENST00000466543 NBPF10Q6P3W6 841 aaKnown RBP23.02■■□□□ 1.28
CYTH3-205ENST00000466543 NBPF15Q8N660 670 aa23.02■■□□□ 1.28
CYTH3-205ENST00000466543 SETDB2Q96T68 719 aa23.02■■□□□ 1.28
CYTH3-205ENST00000466543 ZC3H4Q9UPT8 1303 aaKnown RBP23.02■■□□□ 1.28
CYTH3-205ENST00000466543 C21orf2O43822 256 aa23.01■■□□□ 1.27
CYTH3-205ENST00000466543 PDE6BP35913 854 aa23.01■■□□□ 1.27
CYTH3-205ENST00000466543 RTF1Q92541 710 aaKnown RBP23.01■■□□□ 1.27
CYTH3-205ENST00000466543 GLTPD2A6NH11 291 aa23■■□□□ 1.27
CYTH3-205ENST00000466543 SNRPA1P09661 255 aaKnown RBP23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms