RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 EYA1Q99502 592 aa20.59■□□□□ 0.89
HMGXB4-206ENST00000466438 POTEIP0CG38 1075 aa20.58■□□□□ 0.89
HMGXB4-206ENST00000466438 POTEJP0CG39 1038 aa20.58■□□□□ 0.89
HMGXB4-206ENST00000466438 HSPA8P11142 646 aaKnown RBP20.58■□□□□ 0.89
HMGXB4-206ENST00000466438 PCGF6Q9BYE7 350 aa20.58■□□□□ 0.89
HMGXB4-206ENST00000466438 ANKRD26Q9UPS8 1709 aa20.58■□□□□ 0.88
HMGXB4-206ENST00000466438 ADAMTS7Q9UKP4 1686 aa20.58■□□□□ 0.88
HMGXB4-206ENST00000466438 SLC24A1O60721 1099 aa20.57■□□□□ 0.88
HMGXB4-206ENST00000466438 NRXN2Q9P2S2 1712 aa20.57■□□□□ 0.88
HMGXB4-206ENST00000466438 AFDNP55196 1824 aaKnown RBP20.56■□□□□ 0.88
HMGXB4-206ENST00000466438 ERFEQ4G0M1 354 aa20.56■□□□□ 0.88
HMGXB4-206ENST00000466438 DICER1Q9UPY3 1922 aaKnown RBP20.56■□□□□ 0.88
HMGXB4-206ENST00000466438 WASHC2AQ641Q2 1341 aa20.55■□□□□ 0.88
HMGXB4-206ENST00000466438 TMEM88BA6NKF7 163 aa20.55■□□□□ 0.88
HMGXB4-206ENST00000466438 HSP90AB1P08238 724 aaKnown RBP20.55■□□□□ 0.88
HMGXB4-206ENST00000466438 TJP1Q07157 1748 aa20.54■□□□□ 0.88
HMGXB4-206ENST00000466438 CCDC85CA6NKD9 419 aa20.54■□□□□ 0.88
HMGXB4-206ENST00000466438 PPM1GO15355 546 aaPredicted RBP20.54■□□□□ 0.88
HMGXB4-206ENST00000466438 PTCD1O75127 700 aaKnown RBP20.54■□□□□ 0.88
HMGXB4-206ENST00000466438 ZPR1O75312 459 aa20.54■□□□□ 0.88
HMGXB4-206ENST00000466438 USPL1Q5W0Q7 1092 aa20.54■□□□□ 0.88
HMGXB4-206ENST00000466438 PPP4R3CPQ6ZMV5 832 aa20.54■□□□□ 0.88
HMGXB4-206ENST00000466438 LDHDQ86WU2 507 aa20.53■□□□□ 0.88
HMGXB4-206ENST00000466438 C2CD5Q86YS7 1000 aa20.53■□□□□ 0.88
HMGXB4-206ENST00000466438 ST20-MTHFSA0A0A6YYL1 179 aa20.52■□□□□ 0.88
HMGXB4-206ENST00000466438 CABP4P57796 275 aa20.52■□□□□ 0.88
HMGXB4-206ENST00000466438 H0YIN7 160 aa20.51■□□□□ 0.87
HMGXB4-206ENST00000466438 DDNO94850 711 aaPredicted RBP20.51■□□□□ 0.87
HMGXB4-206ENST00000466438 MAP2K1Q02750 393 aaPredicted RBP20.51■□□□□ 0.87
HMGXB4-206ENST00000466438 NFIXQ14938 502 aa20.51■□□□□ 0.87
HMGXB4-206ENST00000466438 INTS5Q6P9B9 1019 aaKnown RBP20.51■□□□□ 0.87
HMGXB4-206ENST00000466438 IQCA1LA6NCM1 817 aa20.5■□□□□ 0.87
HMGXB4-206ENST00000466438 KCNA4P22459 653 aa20.5■□□□□ 0.87
HMGXB4-206ENST00000466438 FER1L6Q2WGJ9 1857 aa20.5■□□□□ 0.87
HMGXB4-206ENST00000466438 RASSF10A6NK89 507 aa20.49■□□□□ 0.87
HMGXB4-206ENST00000466438 SERPINB2P05120 415 aa20.49■□□□□ 0.87
HMGXB4-206ENST00000466438 LTBP3Q9NS15 1303 aa20.49■□□□□ 0.87
HMGXB4-206ENST00000466438 ITGBL1O95965 494 aaPredicted RBP20.48■□□□□ 0.87
HMGXB4-206ENST00000466438 SOS1Q07889 1333 aaPredicted RBP20.48■□□□□ 0.87
HMGXB4-206ENST00000466438 CARMIL3Q8ND23 1372 aa20.47■□□□□ 0.87
HMGXB4-206ENST00000466438 DEFB115Q30KQ5 88 aa20.47■□□□□ 0.87
HMGXB4-206ENST00000466438 NARFQ9UHQ1 456 aa20.47■□□□□ 0.87
HMGXB4-206ENST00000466438 SCN4AP35499 1836 aa20.47■□□□□ 0.87
HMGXB4-206ENST00000466438 C21orf2O43822 256 aa20.46■□□□□ 0.87
HMGXB4-206ENST00000466438 L3MBTL3Q96JM7 780 aaPredicted RBP20.46■□□□□ 0.87
HMGXB4-206ENST00000466438 TAOK3Q9H2K8 898 aa20.46■□□□□ 0.87
HMGXB4-206ENST00000466438 TAF1DQ9H5J8 278 aaPredicted RBP20.46■□□□□ 0.87
HMGXB4-206ENST00000466438 WDR33Q9C0J8 1336 aaKnown RBP20.45■□□□□ 0.86
HMGXB4-206ENST00000466438 PLEKHO1Q53GL0 409 aaPredicted RBP20.44■□□□□ 0.86
HMGXB4-206ENST00000466438 ZNF530Q6P9A1 599 aaPredicted RBP20.44■□□□□ 0.86
HMGXB4-206ENST00000466438 EIF4A2Q14240 407 aaKnown RBP20.43■□□□□ 0.86
HMGXB4-206ENST00000466438 NFATC2IPQ8NCF5 419 aa20.43■□□□□ 0.86
HMGXB4-206ENST00000466438 ZNF622Q969S3 477 aaKnown RBP eCLIP20.43■□□□□ 0.86
HMGXB4-206ENST00000466438 BCL2L12Q9HB09 334 aa20.43■□□□□ 0.86
HMGXB4-206ENST00000466438 ZNF219Q9P2Y4 722 aaPredicted RBP20.43■□□□□ 0.86
HMGXB4-206ENST00000466438 PDZRN3Q9UPQ7 1066 aa20.43■□□□□ 0.86
HMGXB4-206ENST00000466438 COL15A1P39059 1388 aa20.43■□□□□ 0.86
HMGXB4-206ENST00000466438 THSD7BQ9C0I4 1608 aa20.42■□□□□ 0.86
HMGXB4-206ENST00000466438 MTHFSP49914 203 aa20.42■□□□□ 0.86
HMGXB4-206ENST00000466438 ADAMTSL1Q8N6G6 1762 aa20.41■□□□□ 0.86
HMGXB4-206ENST00000466438 AMOTQ4VCS5 1084 aa20.41■□□□□ 0.86
HMGXB4-206ENST00000466438 EAPPQ56P03 285 aaPredicted RBP20.41■□□□□ 0.86
HMGXB4-206ENST00000466438 DNAJC10Q8IXB1 793 aa20.41■□□□□ 0.86
HMGXB4-206ENST00000466438 CARD14Q9BXL6 1004 aa20.41■□□□□ 0.86
HMGXB4-206ENST00000466438 POLKQ9UBT6 870 aa20.41■□□□□ 0.86
HMGXB4-206ENST00000466438 ANKRD31Q8N7Z5 1873 aa20.41■□□□□ 0.86
HMGXB4-206ENST00000466438 TNRC18O15417 2968 aaPredicted RBP20.4■□□□□ 0.86
HMGXB4-206ENST00000466438 COL11A2P13942 1736 aaPredicted RBP20.4■□□□□ 0.86
HMGXB4-206ENST00000466438 PDE6BP35913 854 aa20.39■□□□□ 0.85
HMGXB4-206ENST00000466438 BEGAINQ9BUH8 593 aa20.39■□□□□ 0.85
HMGXB4-206ENST00000466438 ABT1Q9ULW3 272 aaKnown RBP20.39■□□□□ 0.85
HMGXB4-206ENST00000466438 CYP19A1P11511 503 aaPredicted RBP20.38■□□□□ 0.85
HMGXB4-206ENST00000466438 C1orf141Q5JVX7 400 aa20.38■□□□□ 0.85
HMGXB4-206ENST00000466438 CFAP44Q96MT7 982 aa20.38■□□□□ 0.85
HMGXB4-206ENST00000466438 BRIP1Q9BX63 1249 aa20.38■□□□□ 0.85
HMGXB4-206ENST00000466438 CLEC11AQ9Y240 323 aa20.38■□□□□ 0.85
HMGXB4-206ENST00000466438 SOGA3Q5TF21 947 aa20.37■□□□□ 0.85
HMGXB4-206ENST00000466438 HACL1Q9UJ83 578 aa20.37■□□□□ 0.85
HMGXB4-206ENST00000466438 CNTROBQ8N137 903 aa20.36■□□□□ 0.85
HMGXB4-206ENST00000466438 ZBTB1Q9Y2K1 713 aa20.36■□□□□ 0.85
HMGXB4-206ENST00000466438 EPHX2P34913 555 aa20.35■□□□□ 0.85
HMGXB4-206ENST00000466438 BICDL1Q6ZP65 573 aa20.35■□□□□ 0.85
HMGXB4-206ENST00000466438 PNMA8AQ86V59 439 aaPredicted RBP20.35■□□□□ 0.85
HMGXB4-206ENST00000466438 PDE4DIPQ5VU43 2346 aa20.35■□□□□ 0.85
HMGXB4-206ENST00000466438 ECE1P42892 770 aa20.34■□□□□ 0.85
HMGXB4-206ENST00000466438 CDCA8Q53HL2 280 aa20.34■□□□□ 0.85
HMGXB4-206ENST00000466438 MAP1SQ66K74 1059 aaPredicted RBP20.34■□□□□ 0.85
HMGXB4-206ENST00000466438 CNKSR1Q969H4 720 aa20.34■□□□□ 0.85
HMGXB4-206ENST00000466438 SLX4Q8IY92 1834 aa20.33■□□□□ 0.85
HMGXB4-206ENST00000466438 CAPNS2Q96L46 248 aa20.33■□□□□ 0.85
HMGXB4-206ENST00000466438 MCOLN1Q9GZU1 580 aa20.33■□□□□ 0.85
HMGXB4-206ENST00000466438 SCN11AQ9UI33 1791 aa20.33■□□□□ 0.84
HMGXB4-206ENST00000466438 ZNF541Q9H0D2 1346 aa20.32■□□□□ 0.84
HMGXB4-206ENST00000466438 ARFGEF2Q9Y6D5 1785 aa20.32■□□□□ 0.84
HMGXB4-206ENST00000466438 STYK1Q6J9G0 422 aa20.32■□□□□ 0.84
HMGXB4-206ENST00000466438 PRR5LQ6MZQ0 368 aa20.32■□□□□ 0.84
HMGXB4-206ENST00000466438 PRPF40BQ6NWY9 871 aaKnown RBP20.32■□□□□ 0.84
HMGXB4-206ENST00000466438 LTBP1Q14766 1721 aa20.31■□□□□ 0.84
HMGXB4-206ENST00000466438 GPR101Q96P66 508 aaPredicted RBP20.31■□□□□ 0.84
HMGXB4-206ENST00000466438 DDX21Q9NR30 783 aaKnown RBP eCLIP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms