RNA–Protein interactions for RNA: ENST00000466425.1

PSMB4-202, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 665 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-202ENST00000466425 XRN1Q8IZH2 1706 aaKnown RBP8.33□□□□□ -1.08
PSMB4-202ENST00000466425 PHACTR3Q96KR7 559 aa8.33□□□□□ -1.08
PSMB4-202ENST00000466425 API5Q9BZZ5 524 aaKnown RBP8.33□□□□□ -1.08
PSMB4-202ENST00000466425 LAS1LQ9Y4W2 734 aaKnown RBP8.33□□□□□ -1.08
PSMB4-202ENST00000466425 MON2Q7Z3U7 1717 aa8.32□□□□□ -1.08
PSMB4-202ENST00000466425 NUTM2FA1L443 756 aa8.32□□□□□ -1.08
PSMB4-202ENST00000466425 HTATSF1O43719 755 aaKnown RBP8.32□□□□□ -1.08
PSMB4-202ENST00000466425 IGHDP01880 384 aa8.32□□□□□ -1.08
PSMB4-202ENST00000466425 RLBP1P12271 317 aa8.32□□□□□ -1.08
PSMB4-202ENST00000466425 HDAC1Q13547 482 aaPredicted RBP8.32□□□□□ -1.08
PSMB4-202ENST00000466425 SULT6B1Q6IMI4 303 aa8.32□□□□□ -1.08
PSMB4-202ENST00000466425 ITPRIPQ8IWB1 547 aa8.32□□□□□ -1.08
PSMB4-202ENST00000466425 GAS2L2Q8NHY3 880 aa8.32□□□□□ -1.08
PSMB4-202ENST00000466425 RTF1Q92541 710 aaKnown RBP8.32□□□□□ -1.08
PSMB4-202ENST00000466425 ANO8Q9HCE9 1232 aaPredicted RBP8.32□□□□□ -1.08
PSMB4-202ENST00000466425 NOB1Q9ULX3 412 aaKnown RBP8.32□□□□□ -1.08
PSMB4-202ENST00000466425 VAMP4O75379 141 aa8.31□□□□□ -1.08
PSMB4-202ENST00000466425 RGS3P49796 1198 aa8.31□□□□□ -1.08
PSMB4-202ENST00000466425 FOSBP53539 338 aa8.31□□□□□ -1.08
PSMB4-202ENST00000466425 TWISTNBQ3B726 338 aaPredicted RBP8.31□□□□□ -1.08
PSMB4-202ENST00000466425 CHMP4AQ9BY43 222 aa8.31□□□□□ -1.08
PSMB4-202ENST00000466425 MBIPQ9NS73 344 aa8.31□□□□□ -1.08
PSMB4-202ENST00000466425 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.31□□□□□ -1.08
PSMB4-202ENST00000466425 TOPAZ1Q8N9V7 1692 aa8.3□□□□□ -1.08
PSMB4-202ENST00000466425 MAP3K19Q56UN5 1328 aa8.3□□□□□ -1.08
PSMB4-202ENST00000466425 HSP90AB2PQ58FF8 381 aa8.3□□□□□ -1.08
PSMB4-202ENST00000466425 NPM2Q86SE8 214 aaKnown RBP8.3□□□□□ -1.08
PSMB4-202ENST00000466425 MRPL50Q8N5N7 158 aaKnown RBP8.3□□□□□ -1.08
PSMB4-202ENST00000466425 DDX12PQ92771 950 aa8.3□□□□□ -1.08
PSMB4-202ENST00000466425 ZDHHC16Q969W1 377 aa8.3□□□□□ -1.08
PSMB4-202ENST00000466425 UPF2Q9HAU5 1272 aaKnown RBP8.3□□□□□ -1.08
PSMB4-202ENST00000466425 PCDHB15Q9Y5E8 787 aa8.3□□□□□ -1.08
PSMB4-202ENST00000466425 RTL1A6NKG5 1358 aa8.3□□□□□ -1.08
PSMB4-202ENST00000466425 KIAA0232Q92628 1395 aa8.3□□□□□ -1.08
PSMB4-202ENST00000466425 AKAP12Q02952 1782 aa8.3□□□□□ -1.08
PSMB4-202ENST00000466425 SOS1Q07889 1333 aaPredicted RBP8.29□□□□□ -1.08
PSMB4-202ENST00000466425 ITSN1Q15811 1721 aa8.29□□□□□ -1.08
PSMB4-202ENST00000466425 CHL1O00533 1208 aa8.29□□□□□ -1.08
PSMB4-202ENST00000466425 EIF5BO60841 1220 aaKnown RBP8.29□□□□□ -1.08
PSMB4-202ENST00000466425 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.29□□□□□ -1.08
PSMB4-202ENST00000466425 ABTB2Q8N961 1025 aa8.29□□□□□ -1.08
PSMB4-202ENST00000466425 KCNH5Q8NCM2 988 aa8.29□□□□□ -1.08
PSMB4-202ENST00000466425 CERKQ8TCT0 537 aa8.29□□□□□ -1.08
PSMB4-202ENST00000466425 ZBTB40Q9NUA8 1239 aa8.29□□□□□ -1.08
PSMB4-202ENST00000466425 BABAM1Q9NWV8 329 aa8.29□□□□□ -1.08
PSMB4-202ENST00000466425 NRKQ7Z2Y5 1582 aa8.29□□□□□ -1.08
PSMB4-202ENST00000466425 IGSF1Q8N6C5 1336 aa8.29□□□□□ -1.08
PSMB4-202ENST00000466425 ZNF335Q9H4Z2 1342 aaPredicted RBP8.29□□□□□ -1.08
PSMB4-202ENST00000466425 KDRP35968 1356 aa8.28□□□□□ -1.08
PSMB4-202ENST00000466425 PTPREP23469 700 aa8.28□□□□□ -1.08
PSMB4-202ENST00000466425 C8orf34Q49A92 452 aa8.28□□□□□ -1.08
PSMB4-202ENST00000466425 LMOD2Q6P5Q4 547 aa8.28□□□□□ -1.08
PSMB4-202ENST00000466425 TMEM57Q8N5G2 664 aa8.28□□□□□ -1.08
PSMB4-202ENST00000466425 PDZRN3Q9UPQ7 1066 aa8.28□□□□□ -1.08
PSMB4-202ENST00000466425 ADGRL3Q9HAR2 1447 aa8.28□□□□□ -1.08
PSMB4-202ENST00000466425 NALCNQ8IZF0 1738 aa8.27□□□□□ -1.09
PSMB4-202ENST00000466425 PSME1Q06323 249 aa8.27□□□□□ -1.09
PSMB4-202ENST00000466425 AEBP1Q8IUX7 1158 aa8.27□□□□□ -1.09
PSMB4-202ENST00000466425 GCC1Q96CN9 775 aa8.27□□□□□ -1.09
PSMB4-202ENST00000466425 RBM33Q96EV2 1170 aaKnown RBP8.27□□□□□ -1.09
PSMB4-202ENST00000466425 THUMPD2Q9BTF0 503 aaKnown RBP8.27□□□□□ -1.09
PSMB4-202ENST00000466425 ADAM33Q9BZ11 813 aa8.27□□□□□ -1.09
PSMB4-202ENST00000466425 PCDHGA10Q9Y5H3 936 aa8.27□□□□□ -1.09
PSMB4-202ENST00000466425 ABCC4O15439 1325 aa8.27□□□□□ -1.09
PSMB4-202ENST00000466425 PTPRCP08575 1304 aa8.27□□□□□ -1.09
PSMB4-202ENST00000466425 SPDYE16A6NNV3 312 aaPredicted RBP8.26□□□□□ -1.09
PSMB4-202ENST00000466425 HOXC9P31274 260 aa8.26□□□□□ -1.09
PSMB4-202ENST00000466425 TYW1BQ6NUM6 668 aa8.26□□□□□ -1.09
PSMB4-202ENST00000466425 SMC5Q8IY18 1101 aa8.26□□□□□ -1.09
PSMB4-202ENST00000466425 FBXO41Q8TF61 875 aa8.26□□□□□ -1.09
PSMB4-202ENST00000466425 EYA1Q99502 592 aa8.26□□□□□ -1.09
PSMB4-202ENST00000466425 PODXL2Q9NZ53 605 aa8.26□□□□□ -1.09
PSMB4-202ENST00000466425 TNNQ9UQP3 1299 aa8.26□□□□□ -1.09
PSMB4-202ENST00000466425 GRXCR2A6NFK2 248 aa8.25□□□□□ -1.09
PSMB4-202ENST00000466425 ZBTB7BO15156 539 aaPredicted RBP8.25□□□□□ -1.09
PSMB4-202ENST00000466425 PHF14O94880 888 aa8.25□□□□□ -1.09
PSMB4-202ENST00000466425 ESCO1Q5FWF5 840 aa8.25□□□□□ -1.09
PSMB4-202ENST00000466425 TSPYL6Q8N831 410 aa8.25□□□□□ -1.09
PSMB4-202ENST00000466425 C8orf58Q8NAV2 365 aa8.25□□□□□ -1.09
PSMB4-202ENST00000466425 IP6K1Q92551 441 aa8.25□□□□□ -1.09
PSMB4-202ENST00000466425 BCL2L12Q9HB09 334 aa8.25□□□□□ -1.09
PSMB4-202ENST00000466425 TSPYL4Q9UJ04 414 aa8.25□□□□□ -1.09
PSMB4-202ENST00000466425 NCOA3Q9Y6Q9 1424 aa8.24□□□□□ -1.09
PSMB4-202ENST00000466425 FAM83GA6ND36 823 aa8.24□□□□□ -1.09
PSMB4-202ENST00000466425 GNAT3A8MTJ3 354 aa8.24□□□□□ -1.09
PSMB4-202ENST00000466425 BHMG1C9JSJ3 638 aaPredicted RBP8.24□□□□□ -1.09
PSMB4-202ENST00000466425 NUCB1Q02818 461 aa8.24□□□□□ -1.09
PSMB4-202ENST00000466425 DCTN1Q14203 1278 aa8.24□□□□□ -1.09
PSMB4-202ENST00000466425 BECN1Q14457 450 aa8.24□□□□□ -1.09
PSMB4-202ENST00000466425 PDIA6Q15084 440 aa8.24□□□□□ -1.09
PSMB4-202ENST00000466425 MTHFSDQ2M296 383 aaKnown RBP8.24□□□□□ -1.09
PSMB4-202ENST00000466425 INTS3Q68E01 1043 aaKnown RBP8.24□□□□□ -1.09
PSMB4-202ENST00000466425 MCM10Q7L590 875 aa8.24□□□□□ -1.09
PSMB4-202ENST00000466425 PROSER2Q86WR7 435 aaPredicted RBP8.24□□□□□ -1.09
PSMB4-202ENST00000466425 FBXW7Q969H0 707 aa8.24□□□□□ -1.09
PSMB4-202ENST00000466425 STK31Q9BXU1 1019 aa8.24□□□□□ -1.09
PSMB4-202ENST00000466425 RGPD8O14715 1765 aaPredicted RBP8.23□□□□□ -1.09
PSMB4-202ENST00000466425 CRB1P82279 1406 aa8.23□□□□□ -1.09
PSMB4-202ENST00000466425 ELL2O00472 640 aaPredicted RBP8.23□□□□□ -1.09
PSMB4-202ENST00000466425 RTL5Q5HYW3 569 aaPredicted RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms