RNA–Protein interactions for RNA: ENST00000466416.1

ABCF3-205, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-205ENST00000466416 MYH14Q7Z406 1995 aaKnown RBP12.85□□□□□ -0.35
ABCF3-205ENST00000466416 H0YIN7 160 aa12.84□□□□□ -0.35
ABCF3-205ENST00000466416 PASKQ96RG2 1323 aa12.84□□□□□ -0.35
ABCF3-205ENST00000466416 COL5A3P25940 1745 aaPredicted RBP12.83□□□□□ -0.36
ABCF3-205ENST00000466416 TMEM88BA6NKF7 163 aa12.83□□□□□ -0.36
ABCF3-205ENST00000466416 USPL1Q5W0Q7 1092 aa12.83□□□□□ -0.36
ABCF3-205ENST00000466416 INTS5Q6P9B9 1019 aaKnown RBP12.83□□□□□ -0.36
ABCF3-205ENST00000466416 C2CD5Q86YS7 1000 aa12.83□□□□□ -0.36
ABCF3-205ENST00000466416 IQCA1LA6NCM1 817 aa12.82□□□□□ -0.36
ABCF3-205ENST00000466416 SERPINB2P05120 415 aa12.82□□□□□ -0.36
ABCF3-205ENST00000466416 POTEIP0CG38 1075 aa12.82□□□□□ -0.36
ABCF3-205ENST00000466416 POTEJP0CG39 1038 aa12.82□□□□□ -0.36
ABCF3-205ENST00000466416 HSPA8P11142 646 aaKnown RBP12.82□□□□□ -0.36
ABCF3-205ENST00000466416 MAP2K1Q02750 393 aaPredicted RBP12.82□□□□□ -0.36
ABCF3-205ENST00000466416 NFIXQ14938 502 aa12.82□□□□□ -0.36
ABCF3-205ENST00000466416 PLEKHO1Q53GL0 409 aaPredicted RBP12.82□□□□□ -0.36
ABCF3-205ENST00000466416 LDHDQ86WU2 507 aa12.82□□□□□ -0.36
ABCF3-205ENST00000466416 PDZRN3Q9UPQ7 1066 aa12.82□□□□□ -0.36
ABCF3-205ENST00000466416 NARFQ9UHQ1 456 aa12.81□□□□□ -0.36
ABCF3-205ENST00000466416 CCDC85CA6NKD9 419 aa12.8□□□□□ -0.36
ABCF3-205ENST00000466416 DDNO94850 711 aaPredicted RBP12.8□□□□□ -0.36
ABCF3-205ENST00000466416 MTHFSP49914 203 aa12.8□□□□□ -0.36
ABCF3-205ENST00000466416 DEFB115Q30KQ5 88 aa12.8□□□□□ -0.36
ABCF3-205ENST00000466416 AMOTQ4VCS5 1084 aa12.8□□□□□ -0.36
ABCF3-205ENST00000466416 NFATC2IPQ8NCF5 419 aa12.8□□□□□ -0.36
ABCF3-205ENST00000466416 LTBP3Q9NS15 1303 aa12.8□□□□□ -0.36
ABCF3-205ENST00000466416 RASSF10A6NK89 507 aa12.79□□□□□ -0.36
ABCF3-205ENST00000466416 ITGBL1O95965 494 aaPredicted RBP12.79□□□□□ -0.36
ABCF3-205ENST00000466416 CDCA8Q53HL2 280 aa12.79□□□□□ -0.36
ABCF3-205ENST00000466416 ZNF530Q6P9A1 599 aaPredicted RBP12.79□□□□□ -0.36
ABCF3-205ENST00000466416 POLKQ9UBT6 870 aa12.79□□□□□ -0.36
ABCF3-205ENST00000466416 SOS1Q07889 1333 aaPredicted RBP12.79□□□□□ -0.36
ABCF3-205ENST00000466416 CCDC88AQ3V6T2 1871 aa12.78□□□□□ -0.36
ABCF3-205ENST00000466416 C21orf2O43822 256 aa12.78□□□□□ -0.36
ABCF3-205ENST00000466416 EIF4A2Q14240 407 aaKnown RBP12.78□□□□□ -0.36
ABCF3-205ENST00000466416 ZNF622Q969S3 477 aaKnown RBP eCLIP12.78□□□□□ -0.36
ABCF3-205ENST00000466416 L3MBTL3Q96JM7 780 aaPredicted RBP12.78□□□□□ -0.36
ABCF3-205ENST00000466416 CARD14Q9BXL6 1004 aa12.78□□□□□ -0.36
ABCF3-205ENST00000466416 TAOK3Q9H2K8 898 aa12.78□□□□□ -0.36
ABCF3-205ENST00000466416 TAF1DQ9H5J8 278 aaPredicted RBP12.78□□□□□ -0.36
ABCF3-205ENST00000466416 TIAM2Q8IVF5 1701 aa12.78□□□□□ -0.36
ABCF3-205ENST00000466416 PDE6BP35913 854 aa12.77□□□□□ -0.37
ABCF3-205ENST00000466416 C1orf141Q5JVX7 400 aa12.77□□□□□ -0.37
ABCF3-205ENST00000466416 SOGA3Q5TF21 947 aa12.76□□□□□ -0.37
ABCF3-205ENST00000466416 DNAJC10Q8IXB1 793 aa12.76□□□□□ -0.37
ABCF3-205ENST00000466416 BEGAINQ9BUH8 593 aa12.76□□□□□ -0.37
ABCF3-205ENST00000466416 BRIP1Q9BX63 1249 aa12.76□□□□□ -0.37
ABCF3-205ENST00000466416 BCL2L12Q9HB09 334 aa12.76□□□□□ -0.37
ABCF3-205ENST00000466416 WDR33Q9C0J8 1336 aaKnown RBP12.76□□□□□ -0.37
ABCF3-205ENST00000466416 CYP19A1P11511 503 aaPredicted RBP12.75□□□□□ -0.37
ABCF3-205ENST00000466416 KIF20BQ96Q89 1820 aa12.75□□□□□ -0.37
ABCF3-205ENST00000466416 ZNF219Q9P2Y4 722 aaPredicted RBP12.75□□□□□ -0.37
ABCF3-205ENST00000466416 CLEC11AQ9Y240 323 aa12.75□□□□□ -0.37
ABCF3-205ENST00000466416 VIRMAQ69YN4 1812 aaKnown RBP12.74□□□□□ -0.37
ABCF3-205ENST00000466416 DLEC1Q9Y238 1755 aa12.74□□□□□ -0.37
ABCF3-205ENST00000466416 NRXN2Q9P2S2 1712 aa12.74□□□□□ -0.37
ABCF3-205ENST00000466416 ADAMTS7Q9UKP4 1686 aa12.74□□□□□ -0.37
ABCF3-205ENST00000466416 COL15A1P39059 1388 aa12.74□□□□□ -0.37
ABCF3-205ENST00000466416 EAPPQ56P03 285 aaPredicted RBP12.74□□□□□ -0.37
ABCF3-205ENST00000466416 PNMA8AQ86V59 439 aaPredicted RBP12.74□□□□□ -0.37
ABCF3-205ENST00000466416 CNKSR1Q969H4 720 aa12.74□□□□□ -0.37
ABCF3-205ENST00000466416 DICER1Q9UPY3 1922 aaKnown RBP12.74□□□□□ -0.37
ABCF3-205ENST00000466416 AFDNP55196 1824 aaKnown RBP12.74□□□□□ -0.37
ABCF3-205ENST00000466416 CNTROBQ8N137 903 aa12.73□□□□□ -0.37
ABCF3-205ENST00000466416 HACL1Q9UJ83 578 aa12.73□□□□□ -0.37
ABCF3-205ENST00000466416 ANKRD26Q9UPS8 1709 aa12.73□□□□□ -0.37
ABCF3-205ENST00000466416 CARMIL3Q8ND23 1372 aa12.72□□□□□ -0.37
ABCF3-205ENST00000466416 ECE1P42892 770 aa12.72□□□□□ -0.37
ABCF3-205ENST00000466416 BICDL1Q6ZP65 573 aa12.72□□□□□ -0.37
ABCF3-205ENST00000466416 ABT1Q9ULW3 272 aaKnown RBP12.72□□□□□ -0.37
ABCF3-205ENST00000466416 ZBTB1Q9Y2K1 713 aa12.72□□□□□ -0.37
ABCF3-205ENST00000466416 A0A087WZG4 1122 aa12.71□□□□□ -0.37
ABCF3-205ENST00000466416 EPHX2P34913 555 aa12.71□□□□□ -0.37
ABCF3-205ENST00000466416 STYK1Q6J9G0 422 aa12.71□□□□□ -0.37
ABCF3-205ENST00000466416 FER1L6Q2WGJ9 1857 aa12.71□□□□□ -0.37
ABCF3-205ENST00000466416 SCN4AP35499 1836 aa12.71□□□□□ -0.38
ABCF3-205ENST00000466416 TJP1Q07157 1748 aa12.71□□□□□ -0.38
ABCF3-205ENST00000466416 VSIG10Q8N0Z9 540 aa12.7□□□□□ -0.38
ABCF3-205ENST00000466416 SLC52A2Q9HAB3 445 aa12.7□□□□□ -0.38
ABCF3-205ENST00000466416 MAP1SQ66K74 1059 aaPredicted RBP12.69□□□□□ -0.38
ABCF3-205ENST00000466416 PRR5LQ6MZQ0 368 aa12.69□□□□□ -0.38
ABCF3-205ENST00000466416 PRPF40BQ6NWY9 871 aaKnown RBP12.69□□□□□ -0.38
ABCF3-205ENST00000466416 MASTLQ96GX5 879 aa12.69□□□□□ -0.38
ABCF3-205ENST00000466416 CAPNS2Q96L46 248 aa12.69□□□□□ -0.38
ABCF3-205ENST00000466416 CFAP44Q96MT7 982 aa12.69□□□□□ -0.38
ABCF3-205ENST00000466416 GPR101Q96P66 508 aaPredicted RBP12.69□□□□□ -0.38
ABCF3-205ENST00000466416 SRGNP10124 158 aa12.68□□□□□ -0.38
ABCF3-205ENST00000466416 CANXP27824 592 aaKnown RBP12.68□□□□□ -0.38
ABCF3-205ENST00000466416 MAP2K2P36507 400 aa12.68□□□□□ -0.38
ABCF3-205ENST00000466416 TNNT2P45379 298 aaPredicted RBP12.68□□□□□ -0.38
ABCF3-205ENST00000466416 EIF5P55010 431 aaKnown RBP12.68□□□□□ -0.38
ABCF3-205ENST00000466416 AKAP4Q5JQC9 854 aa12.68□□□□□ -0.38
ABCF3-205ENST00000466416 TBC1D9BQ66K14 1250 aa12.68□□□□□ -0.38
ABCF3-205ENST00000466416 DDX21Q9NR30 783 aaKnown RBP eCLIP12.68□□□□□ -0.38
ABCF3-205ENST00000466416 CA12O43570 354 aa12.67□□□□□ -0.38
ABCF3-205ENST00000466416 STARD3NLO95772 234 aa12.67□□□□□ -0.38
ABCF3-205ENST00000466416 SLC39A6Q13433 755 aa12.67□□□□□ -0.38
ABCF3-205ENST00000466416 CCDC93Q567U6 631 aa12.67□□□□□ -0.38
ABCF3-205ENST00000466416 C7orf43Q8WVR3 580 aa12.67□□□□□ -0.38
ABCF3-205ENST00000466416 MCOLN1Q9GZU1 580 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 161.8 ms