RNA–Protein interactions for RNA: ENST00000466351.1

CDHR3-204, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 362 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-204ENST00000466351 TICAM2Q86XR7 235 aa8.39□□□□□ -1.07
CDHR3-204ENST00000466351 TNPO1Q92973 898 aaKnown RBP8.39□□□□□ -1.07
CDHR3-204ENST00000466351 C1orf167Q5SNV9 1468 aa8.38□□□□□ -1.07
CDHR3-204ENST00000466351 UBR2Q8IWV8 1755 aa8.38□□□□□ -1.07
CDHR3-204ENST00000466351 C5P01031 1676 aa8.38□□□□□ -1.07
CDHR3-204ENST00000466351 FOXO3O43524 673 aa8.38□□□□□ -1.07
CDHR3-204ENST00000466351 EIF4A1P60842 406 aaKnown RBP8.38□□□□□ -1.07
CDHR3-204ENST00000466351 MKRN4PQ13434 485 aaPredicted RBP8.38□□□□□ -1.07
CDHR3-204ENST00000466351 ERC1Q8IUD2 1116 aa8.38□□□□□ -1.07
CDHR3-204ENST00000466351 KIF1BPQ96EK5 621 aa8.38□□□□□ -1.07
CDHR3-204ENST00000466351 DBF4Q9UBU7 674 aaPredicted RBP8.38□□□□□ -1.07
CDHR3-204ENST00000466351 PAPPAQ13219 1627 aa8.37□□□□□ -1.07
CDHR3-204ENST00000466351 UTYO14607 1347 aa8.37□□□□□ -1.07
CDHR3-204ENST00000466351 CUL4AQ13619 759 aa8.37□□□□□ -1.07
CDHR3-204ENST00000466351 G2E3Q7L622 706 aa8.37□□□□□ -1.07
CDHR3-204ENST00000466351 ESYT1Q9BSJ8 1104 aa8.37□□□□□ -1.07
CDHR3-204ENST00000466351 USP44Q9H0E7 712 aa8.37□□□□□ -1.07
CDHR3-204ENST00000466351 AFDNP55196 1824 aaKnown RBP8.37□□□□□ -1.07
CDHR3-204ENST00000466351 SPEF2Q9C093 1822 aa8.37□□□□□ -1.07
CDHR3-204ENST00000466351 RFX7Q2KHR2 1363 aa8.36□□□□□ -1.07
CDHR3-204ENST00000466351 ARFGEF2Q9Y6D5 1785 aa8.36□□□□□ -1.07
CDHR3-204ENST00000466351 NUTM2FA1L443 756 aa8.36□□□□□ -1.07
CDHR3-204ENST00000466351 TEFQ10587 303 aa8.36□□□□□ -1.07
CDHR3-204ENST00000466351 C1orf141Q5JVX7 400 aa8.36□□□□□ -1.07
CDHR3-204ENST00000466351 SLC4A10Q6U841 1118 aa8.36□□□□□ -1.07
CDHR3-204ENST00000466351 DNAAF4Q8WXU2 420 aa8.36□□□□□ -1.07
CDHR3-204ENST00000466351 HYPKQ9NX55 129 aa8.36□□□□□ -1.07
CDHR3-204ENST00000466351 PXDNQ92626 1479 aa8.36□□□□□ -1.07
CDHR3-204ENST00000466351 ADCY9O60503 1353 aa8.35□□□□□ -1.07
CDHR3-204ENST00000466351 CPDO75976 1380 aa8.35□□□□□ -1.07
CDHR3-204ENST00000466351 GLI3P10071 1580 aa8.35□□□□□ -1.07
CDHR3-204ENST00000466351 RAD50Q92878 1312 aa8.35□□□□□ -1.07
CDHR3-204ENST00000466351 CD2BP2O95400 341 aaKnown RBP8.35□□□□□ -1.07
CDHR3-204ENST00000466351 CHMLP26374 656 aa8.35□□□□□ -1.07
CDHR3-204ENST00000466351 ZNF445P59923 1031 aa8.35□□□□□ -1.07
CDHR3-204ENST00000466351 PSME1Q06323 249 aa8.35□□□□□ -1.07
CDHR3-204ENST00000466351 BEND3Q5T5X7 828 aa8.35□□□□□ -1.07
CDHR3-204ENST00000466351 NBPF6Q5VWK0 638 aa8.35□□□□□ -1.07
CDHR3-204ENST00000466351 ZNF530Q6P9A1 599 aaPredicted RBP8.35□□□□□ -1.07
CDHR3-204ENST00000466351 GPATCH3Q96I76 525 aa8.35□□□□□ -1.07
CDHR3-204ENST00000466351 NBPF4Q96M43 638 aa8.35□□□□□ -1.07
CDHR3-204ENST00000466351 ERBB3P21860 1342 aa8.34□□□□□ -1.07
CDHR3-204ENST00000466351 ERBB4Q15303 1308 aa8.34□□□□□ -1.07
CDHR3-204ENST00000466351 F6X3S4 739 aa8.34□□□□□ -1.07
CDHR3-204ENST00000466351 HIP1O00291 1037 aa8.34□□□□□ -1.07
CDHR3-204ENST00000466351 RNMTO43148 476 aaKnown RBP8.34□□□□□ -1.07
CDHR3-204ENST00000466351 GLRX3O76003 335 aaKnown RBP8.34□□□□□ -1.07
CDHR3-204ENST00000466351 BAG4O95429 457 aaKnown RBP8.34□□□□□ -1.07
CDHR3-204ENST00000466351 DDX58O95786 925 aaKnown RBP8.34□□□□□ -1.07
CDHR3-204ENST00000466351 MBD3O95983 291 aa8.34□□□□□ -1.07
CDHR3-204ENST00000466351 GCP02774 474 aa8.34□□□□□ -1.07
CDHR3-204ENST00000466351 CNTROBQ8N137 903 aa8.34□□□□□ -1.07
CDHR3-204ENST00000466351 RUFY2Q8WXA3 655 aa8.34□□□□□ -1.07
CDHR3-204ENST00000466351 GRPEL1Q9HAV7 217 aa8.34□□□□□ -1.07
CDHR3-204ENST00000466351 LRRFIP2Q9Y608 721 aaKnown RBP8.34□□□□□ -1.07
CDHR3-204ENST00000466351 TNS3Q68CZ2 1445 aa8.34□□□□□ -1.07
CDHR3-204ENST00000466351 NUP188Q5SRE5 1749 aa8.34□□□□□ -1.07
CDHR3-204ENST00000466351 ABCA3Q99758 1704 aa8.34□□□□□ -1.07
CDHR3-204ENST00000466351 STRCP1A6NGW2 1772 aa8.33□□□□□ -1.08
CDHR3-204ENST00000466351 PNMA6EA0A0J9YXQ4 647 aa8.33□□□□□ -1.08
CDHR3-204ENST00000466351 GIGYF1O75420 1035 aaPredicted RBP8.33□□□□□ -1.08
CDHR3-204ENST00000466351 PLEKHG5O94827 1062 aa8.33□□□□□ -1.08
CDHR3-204ENST00000466351 HSPA4P34932 840 aa8.33□□□□□ -1.08
CDHR3-204ENST00000466351 KSR2Q6VAB6 950 aa8.33□□□□□ -1.08
CDHR3-204ENST00000466351 LINS1Q8NG48 757 aa8.33□□□□□ -1.08
CDHR3-204ENST00000466351 RHPN1Q8TCX5 695 aa8.33□□□□□ -1.08
CDHR3-204ENST00000466351 OTUD7AQ8TE49 926 aaPredicted RBP8.33□□□□□ -1.08
CDHR3-204ENST00000466351 C19orf44Q9H6X5 657 aa8.33□□□□□ -1.08
CDHR3-204ENST00000466351 SNRKQ9NRH2 765 aa8.33□□□□□ -1.08
CDHR3-204ENST00000466351 BRPF3Q9ULD4 1205 aa8.33□□□□□ -1.08
CDHR3-204ENST00000466351 EXOC6BQ9Y2D4 811 aa8.33□□□□□ -1.08
CDHR3-204ENST00000466351 XIRP1Q702N8 1843 aaKnown RBP8.32□□□□□ -1.08
CDHR3-204ENST00000466351 BTBD11A6QL63 1104 aa8.32□□□□□ -1.08
CDHR3-204ENST00000466351 SOX12O15370 315 aa8.32□□□□□ -1.08
CDHR3-204ENST00000466351 XRCC6P12956 609 aaKnown RBP eCLIP8.32□□□□□ -1.08
CDHR3-204ENST00000466351 HS1BP3Q53T59 392 aa8.32□□□□□ -1.08
CDHR3-204ENST00000466351 ESCO1Q5FWF5 840 aa8.32□□□□□ -1.08
CDHR3-204ENST00000466351 C16orf71Q8IYS4 520 aaPredicted RBP8.32□□□□□ -1.08
CDHR3-204ENST00000466351 PI4K2BQ8TCG2 481 aa8.32□□□□□ -1.08
CDHR3-204ENST00000466351 KCNB2Q92953 911 aa8.32□□□□□ -1.08
CDHR3-204ENST00000466351 TM6SF1Q9BZW5 370 aa8.32□□□□□ -1.08
CDHR3-204ENST00000466351 DDX21Q9NR30 783 aaKnown RBP eCLIP8.32□□□□□ -1.08
CDHR3-204ENST00000466351 MIS18AQ9NYP9 233 aa8.32□□□□□ -1.08
CDHR3-204ENST00000466351 NPHP3Q7Z494 1330 aa8.31□□□□□ -1.08
CDHR3-204ENST00000466351 TCHHQ07283 1943 aa8.31□□□□□ -1.08
CDHR3-204ENST00000466351 SGSM2O43147 1006 aa8.31□□□□□ -1.08
CDHR3-204ENST00000466351 SMARCA5O60264 1052 aaPredicted RBP8.31□□□□□ -1.08
CDHR3-204ENST00000466351 PPP1R42Q7Z4L9 355 aa8.31□□□□□ -1.08
CDHR3-204ENST00000466351 CLASRPQ8N2M8 674 aaKnown RBP8.31□□□□□ -1.08
CDHR3-204ENST00000466351 ANKRD24Q8TF21 1146 aa8.31□□□□□ -1.08
CDHR3-204ENST00000466351 ANP32BQ92688 251 aaKnown RBP8.31□□□□□ -1.08
CDHR3-204ENST00000466351 CHPF2Q9P2E5 772 aa8.31□□□□□ -1.08
CDHR3-204ENST00000466351 TMEM94Q12767 1356 aa8.31□□□□□ -1.08
CDHR3-204ENST00000466351 JCADQ9P266 1359 aa8.31□□□□□ -1.08
CDHR3-204ENST00000466351 KDM6AO15550 1401 aaPredicted RBP8.3□□□□□ -1.08
CDHR3-204ENST00000466351 PI4KAP2A4QPH2 592 aa8.3□□□□□ -1.08
CDHR3-204ENST00000466351 SRGAP3O43295 1099 aa8.3□□□□□ -1.08
CDHR3-204ENST00000466351 BRD1O95696 1058 aa8.3□□□□□ -1.08
CDHR3-204ENST00000466351 SSFA2P28290 1259 aa8.3□□□□□ -1.08
CDHR3-204ENST00000466351 CLCN1P35523 988 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms