RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 FYCO1Q9BQS8 1478 aa9.38□□□□□ -0.91
NCL-208ENST00000466274 BLMP54132 1417 aaPredicted RBP9.38□□□□□ -0.91
NCL-208ENST00000466274 CAMSAP2Q08AD1 1489 aa9.37□□□□□ -0.91
NCL-208ENST00000466274 WDR4P57081 412 aaKnown RBP9.37□□□□□ -0.91
NCL-208ENST00000466274 IDI1Q13907 227 aa9.37□□□□□ -0.91
NCL-208ENST00000466274 AGERQ15109 404 aa9.37□□□□□ -0.91
NCL-208ENST00000466274 C4orf48Q5BLP8 95 aa9.37□□□□□ -0.91
NCL-208ENST00000466274 ZFP42Q96MM3 310 aa9.37□□□□□ -0.91
NCL-208ENST00000466274 POLR3EQ9NVU0 708 aa9.37□□□□□ -0.91
NCL-208ENST00000466274 TBX22Q9Y458 520 aa9.37□□□□□ -0.91
NCL-208ENST00000466274 TET3O43151 1660 aa9.36□□□□□ -0.91
NCL-208ENST00000466274 WIPF1O43516 503 aa9.36□□□□□ -0.91
NCL-208ENST00000466274 ADH1CP00326 375 aa9.36□□□□□ -0.91
NCL-208ENST00000466274 TIMP2P16035 220 aa9.36□□□□□ -0.91
NCL-208ENST00000466274 TUSC1Q2TAM9 212 aa9.36□□□□□ -0.91
NCL-208ENST00000466274 FNBP4Q8N3X1 1017 aaPredicted RBP9.36□□□□□ -0.91
NCL-208ENST00000466274 CDK15Q96Q40 435 aa9.36□□□□□ -0.91
NCL-208ENST00000466274 EFCAB6Q5THR3 1501 aa9.36□□□□□ -0.91
NCL-208ENST00000466274 KLF16Q9BXK1 252 aaPredicted RBP9.35□□□□□ -0.91
NCL-208ENST00000466274 SLC52A1Q9NWF4 448 aa9.35□□□□□ -0.91
NCL-208ENST00000466274 CLK2P49760 499 aaKnown RBP9.34□□□□□ -0.91
NCL-208ENST00000466274 DEFB132Q7Z7B7 95 aa9.34□□□□□ -0.91
NCL-208ENST00000466274 NXF1Q9UBU9 619 aaKnown RBP9.34□□□□□ -0.91
NCL-208ENST00000466274 PNPLA6Q8IY17 1366 aa9.34□□□□□ -0.91
NCL-208ENST00000466274 PLEKHG1Q9ULL1 1385 aa9.34□□□□□ -0.91
NCL-208ENST00000466274 LRP5O75197 1615 aa9.34□□□□□ -0.91
NCL-208ENST00000466274 KDM5AP29375 1690 aaKnown RBP9.33□□□□□ -0.92
NCL-208ENST00000466274 GRM5P41594 1212 aa9.33□□□□□ -0.92
NCL-208ENST00000466274 VEGFBP49765 207 aa9.33□□□□□ -0.92
NCL-208ENST00000466274 MRPL14Q6P1L8 145 aaKnown RBP9.33□□□□□ -0.92
NCL-208ENST00000466274 BPHLQ86WA6 291 aaPredicted RBP9.33□□□□□ -0.92
NCL-208ENST00000466274 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.33□□□□□ -0.922e-60■□□□□ 8.1
NCL-208ENST00000466274 PURBQ96QR8 312 aaKnown RBP9.33□□□□□ -0.92
NCL-208ENST00000466274 KANK1Q14678 1352 aa9.33□□□□□ -0.92
NCL-208ENST00000466274 DIP2AQ14689 1571 aa9.33□□□□□ -0.92
NCL-208ENST00000466274 ATRNO75882 1429 aa9.32□□□□□ -0.92
NCL-208ENST00000466274 MROH1Q8NDA8 1641 aa9.32□□□□□ -0.92
NCL-208ENST00000466274 LRRIQ1Q96JM4 1722 aa9.32□□□□□ -0.92
NCL-208ENST00000466274 NR3C2P08235 984 aa9.32□□□□□ -0.92
NCL-208ENST00000466274 HELBQ8NG08 1087 aaPredicted RBP9.32□□□□□ -0.92
NCL-208ENST00000466274 SLC16A10Q8TF71 515 aa9.32□□□□□ -0.92
NCL-208ENST00000466274 GJD4Q96KN9 370 aaPredicted RBP9.32□□□□□ -0.92
NCL-208ENST00000466274 ZFAND3Q9H8U3 227 aa9.32□□□□□ -0.92
NCL-208ENST00000466274 PIK3R4Q99570 1358 aa9.32□□□□□ -0.92
NCL-208ENST00000466274 DCCP43146 1447 aa9.31□□□□□ -0.92
NCL-208ENST00000466274 BAG6P46379 1132 aa9.31□□□□□ -0.92
NCL-208ENST00000466274 SCARF1Q14162 830 aa9.31□□□□□ -0.92
NCL-208ENST00000466274 ITPKCQ96DU7 683 aa9.31□□□□□ -0.92
NCL-208ENST00000466274 RSPH6AQ9H0K4 717 aa9.31□□□□□ -0.92
NCL-208ENST00000466274 PTCH1Q13635 1447 aa9.31□□□□□ -0.92
NCL-208ENST00000466274 CEP162Q5TB80 1403 aa9.31□□□□□ -0.92
NCL-208ENST00000466274 SENP3-EIF4A1A0A087X0R7 540 aa9.3□□□□□ -0.92
NCL-208ENST00000466274 SOBPA7XYQ1 873 aa9.3□□□□□ -0.92
NCL-208ENST00000466274 ZIC2O95409 532 aaPredicted RBP9.3□□□□□ -0.92
NCL-208ENST00000466274 INSM1Q01101 510 aaPredicted RBP9.3□□□□□ -0.92
NCL-208ENST00000466274 ASXL1Q8IXJ9 1541 aa9.3□□□□□ -0.92
NCL-208ENST00000466274 CTDSPL2Q05D32 466 aa9.29□□□□□ -0.92
NCL-208ENST00000466274 NR5A1Q13285 461 aa9.29□□□□□ -0.92
NCL-208ENST00000466274 ARMC2Q8NEN0 867 aa9.29□□□□□ -0.92
NCL-208ENST00000466274 AMOTL2Q9Y2J4 779 aa9.29□□□□□ -0.92
NCL-208ENST00000466274 NHSL1Q5SYE7 1610 aa9.28□□□□□ -0.92
NCL-208ENST00000466274 GMPRP36959 345 aa9.28□□□□□ -0.92
NCL-208ENST00000466274 SH3RF1Q7Z6J0 888 aa9.28□□□□□ -0.92
NCL-208ENST00000466274 C1QTNF2Q9BXJ5 285 aa9.28□□□□□ -0.92
NCL-208ENST00000466274 STK17AQ9UEE5 414 aa9.28□□□□□ -0.92
NCL-208ENST00000466274 PIK3C2BO00750 1634 aa9.27□□□□□ -0.92
NCL-208ENST00000466274 MAGEB6P1A0A0J9YX57 407 aa9.27□□□□□ -0.93
NCL-208ENST00000466274 C6orf118Q5T5N4 469 aa9.27□□□□□ -0.93
NCL-208ENST00000466274 NBPF14Q5TI25 921 aa9.27□□□□□ -0.93
NCL-208ENST00000466274 SH3BP5LQ7L8J4 393 aa9.27□□□□□ -0.93
NCL-208ENST00000466274 GPBP1L1Q9HC44 474 aaPredicted RBP9.27□□□□□ -0.93
NCL-208ENST00000466274 EIF2AK4Q9P2K8 1649 aaKnown RBP9.27□□□□□ -0.93
NCL-208ENST00000466274 MAST1Q9Y2H9 1570 aa9.26□□□□□ -0.93
NCL-208ENST00000466274 RIMS2Q9UQ26 1411 aa9.26□□□□□ -0.93
NCL-208ENST00000466274 H3BM21 787 aa9.26□□□□□ -0.93
NCL-208ENST00000466274 PROCA1Q8NCQ7 364 aaPredicted RBP9.26□□□□□ -0.93
NCL-208ENST00000466274 DDX17Q92841 729 aaKnown RBP9.26□□□□□ -0.93
NCL-208ENST00000466274 MST1RQ04912 1400 aa9.25□□□□□ -0.93
NCL-208ENST00000466274 R3HDM1Q15032 1099 aaKnown RBP9.25□□□□□ -0.93
NCL-208ENST00000466274 VASH1Q7L8A9 365 aaPredicted RBP9.25□□□□□ -0.93
NCL-208ENST00000466274 UNC5CLQ8IV45 518 aa9.25□□□□□ -0.93
NCL-208ENST00000466274 NPAS3Q8IXF0 933 aa9.25□□□□□ -0.93
NCL-208ENST00000466274 LRRN4Q8WUT4 740 aa9.25□□□□□ -0.93
NCL-208ENST00000466274 IRF7Q92985 503 aa9.25□□□□□ -0.93
NCL-208ENST00000466274 CARD14Q9BXL6 1004 aa9.25□□□□□ -0.93
NCL-208ENST00000466274 EP400Q96L91 3159 aa9.25□□□□□ -0.93
NCL-208ENST00000466274 ERBB4Q15303 1308 aa9.25□□□□□ -0.93
NCL-208ENST00000466274 EHBP1L1Q8N3D4 1523 aa9.25□□□□□ -0.93
NCL-208ENST00000466274 DUOX2Q9NRD8 1548 aa9.25□□□□□ -0.93
NCL-208ENST00000466274 ARHGEF5Q12774 1597 aa9.24□□□□□ -0.93
NCL-208ENST00000466274 FSHRP23945 695 aa9.24□□□□□ -0.93
NCL-208ENST00000466274 SEPT12Q8IYM1 358 aa9.24□□□□□ -0.93
NCL-208ENST00000466274 FAM117AQ9C073 453 aa9.24□□□□□ -0.93
NCL-208ENST00000466274 KDM4CQ9H3R0 1056 aa9.24□□□□□ -0.93
NCL-208ENST00000466274 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.24□□□□□ -0.93
NCL-208ENST00000466274 ADGRB3O60242 1522 aa9.24□□□□□ -0.93
NCL-208ENST00000466274 SOS2Q07890 1332 aaPredicted RBP9.24□□□□□ -0.93
NCL-208ENST00000466274 ZFYVE9O95405 1425 aa9.23□□□□□ -0.93
NCL-208ENST00000466274 RPRD2Q5VT52 1461 aaKnown RBP9.23□□□□□ -0.93
NCL-208ENST00000466274 BCL9LQ86UU0 1499 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms