RNA–Protein interactions for RNA: ENST00000466175.5

LETM1-202, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 2

Gene LETM1, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-202ENST00000466175 MPRIPQ6WCQ1 1025 aa22.72■■□□□ 1.23
LETM1-202ENST00000466175 PLEKHM2Q8IWE5 1019 aa22.71■■□□□ 1.23
LETM1-202ENST00000466175 SPG7Q9UQ90 795 aa22.71■■□□□ 1.23
LETM1-202ENST00000466175 SPATA31A5Q5VU36 1347 aa22.7■■□□□ 1.22
LETM1-202ENST00000466175 SPATA31A7Q8IWB4 1347 aa22.7■■□□□ 1.22
LETM1-202ENST00000466175 TATP17735 454 aaPredicted RBP22.7■■□□□ 1.22
LETM1-202ENST00000466175 SLC4A3P48751 1232 aa22.7■■□□□ 1.22
LETM1-202ENST00000466175 FAM98CQ17RN3 349 aaKnown RBP22.7■■□□□ 1.22
LETM1-202ENST00000466175 HEG1Q9ULI3 1381 aa22.69■■□□□ 1.22
LETM1-202ENST00000466175 CDC45O75419 566 aa22.69■■□□□ 1.22
LETM1-202ENST00000466175 CSB-PGBD3P0DP91 1061 aa22.69■■□□□ 1.22
LETM1-202ENST00000466175 RBM25P49756 843 aaKnown RBP22.69■■□□□ 1.22
LETM1-202ENST00000466175 NECTIN2Q92692 538 aa22.69■■□□□ 1.22
LETM1-202ENST00000466175 A0A0G2JS52 829 aa22.68■■□□□ 1.22
LETM1-202ENST00000466175 ATP8B2P98198 1209 aa22.68■■□□□ 1.22
LETM1-202ENST00000466175 SPATA31A1Q5TZJ5 1347 aa22.68■■□□□ 1.22
LETM1-202ENST00000466175 TTC22Q5TAA0 569 aa22.68■■□□□ 1.22
LETM1-202ENST00000466175 NLRP2Q9NX02 1062 aa22.68■■□□□ 1.22
LETM1-202ENST00000466175 DBF4Q9UBU7 674 aaPredicted RBP22.68■■□□□ 1.22
LETM1-202ENST00000466175 SCN11AQ9UI33 1791 aa22.67■■□□□ 1.22
LETM1-202ENST00000466175 TOM1L2Q6ZVM7 507 aa22.67■■□□□ 1.22
LETM1-202ENST00000466175 EIF2S2P20042 333 aaKnown RBP22.66■■□□□ 1.22
LETM1-202ENST00000466175 SRCIN1Q9C0H9 1055 aa22.66■■□□□ 1.22
LETM1-202ENST00000466175 WDR17Q8IZU2 1322 aa22.65■■□□□ 1.22
LETM1-202ENST00000466175 BRWD3Q6RI45 1802 aa22.64■■□□□ 1.22
LETM1-202ENST00000466175 UBTFL1P0CB47 393 aaPredicted RBP22.64■■□□□ 1.22
LETM1-202ENST00000466175 SEPT12Q8IYM1 358 aa22.64■■□□□ 1.22
LETM1-202ENST00000466175 OSBPL3Q9H4L5 887 aa22.64■■□□□ 1.22
LETM1-202ENST00000466175 CHPF2Q9P2E5 772 aa22.64■■□□□ 1.22
LETM1-202ENST00000466175 GIGYF1O75420 1035 aaPredicted RBP22.64■■□□□ 1.21
LETM1-202ENST00000466175 TBC1D9Q6ZT07 1266 aa22.64■■□□□ 1.21
LETM1-202ENST00000466175 DNAAF4Q8WXU2 420 aa22.64■■□□□ 1.21
LETM1-202ENST00000466175 USP44Q9H0E7 712 aa22.64■■□□□ 1.21
LETM1-202ENST00000466175 PHAXQ9H814 394 aaKnown RBP22.64■■□□□ 1.21
LETM1-202ENST00000466175 HDAC5Q9UQL6 1122 aa22.64■■□□□ 1.21
LETM1-202ENST00000466175 KCNQ3O43525 872 aa22.63■■□□□ 1.21
LETM1-202ENST00000466175 HSP90AB1P08238 724 aaKnown RBP22.63■■□□□ 1.21
LETM1-202ENST00000466175 IFNL2Q8IZJ0 200 aa22.63■■□□□ 1.21
LETM1-202ENST00000466175 PKD1L3Q7Z443 1732 aa22.62■■□□□ 1.21
LETM1-202ENST00000466175 CASC1Q6TDU7 716 aa22.62■■□□□ 1.21
LETM1-202ENST00000466175 TBC1D2Q9BYX2 928 aa22.62■■□□□ 1.21
LETM1-202ENST00000466175 HYPKQ9NX55 129 aa22.62■■□□□ 1.21
LETM1-202ENST00000466175 GSPT1P15170 499 aaKnown RBP22.61■■□□□ 1.21
LETM1-202ENST00000466175 PHKG2P15735 406 aa22.61■■□□□ 1.21
LETM1-202ENST00000466175 LRRCC1Q9C099 1032 aa22.6■■□□□ 1.21
LETM1-202ENST00000466175 SLC52A2Q9HAB3 445 aa22.6■■□□□ 1.21
LETM1-202ENST00000466175 MRC1P22897 1456 aa22.6■■□□□ 1.21
LETM1-202ENST00000466175 ONECUT3O60422 494 aaPredicted RBP22.6■■□□□ 1.21
LETM1-202ENST00000466175 LRRFIP2Q9Y608 721 aaKnown RBP22.6■■□□□ 1.21
LETM1-202ENST00000466175 MEGF6O75095 1541 aa22.59■■□□□ 1.21
LETM1-202ENST00000466175 IBTKQ9P2D0 1353 aaPredicted RBP22.59■■□□□ 1.21
LETM1-202ENST00000466175 ALDH1L1O75891 902 aa22.59■■□□□ 1.21
LETM1-202ENST00000466175 BEND3Q5T5X7 828 aa22.59■■□□□ 1.21
LETM1-202ENST00000466175 SNX21Q969T3 373 aa22.59■■□□□ 1.21
LETM1-202ENST00000466175 DCAF5Q96JK2 942 aa22.59■■□□□ 1.21
LETM1-202ENST00000466175 RAB11FIP3O75154 756 aa22.58■■□□□ 1.21
LETM1-202ENST00000466175 C16orf71Q8IYS4 520 aaPredicted RBP22.58■■□□□ 1.21
LETM1-202ENST00000466175 SSH3Q8TE77 659 aa22.58■■□□□ 1.21
LETM1-202ENST00000466175 KDM6AO15550 1401 aaPredicted RBP22.58■■□□□ 1.2
LETM1-202ENST00000466175 PI4KAP2A4QPH2 592 aa22.57■■□□□ 1.2
LETM1-202ENST00000466175 DDX58O95786 925 aaKnown RBP22.57■■□□□ 1.2
LETM1-202ENST00000466175 PI4KAP1Q8N8J0 262 aa22.57■■□□□ 1.2
LETM1-202ENST00000466175 THSD7AQ9UPZ6 1657 aa22.57■■□□□ 1.2
LETM1-202ENST00000466175 EP400Q96L91 3159 aa22.57■■□□□ 1.2
LETM1-202ENST00000466175 SMARCA5O60264 1052 aaPredicted RBP22.57■■□□□ 1.2
LETM1-202ENST00000466175 NFKBIBQ15653 356 aa22.57■■□□□ 1.2
LETM1-202ENST00000466175 ZNF790Q6PG37 636 aa22.57■■□□□ 1.2
LETM1-202ENST00000466175 KSR2Q6VAB6 950 aa22.57■■□□□ 1.2
LETM1-202ENST00000466175 HSCBQ8IWL3 235 aa22.57■■□□□ 1.2
LETM1-202ENST00000466175 CARD10Q9BWT7 1032 aa22.57■■□□□ 1.2
LETM1-202ENST00000466175 PARP4Q9UKK3 1724 aaKnown RBP22.57■■□□□ 1.2
LETM1-202ENST00000466175 SOCS7O14512 581 aa22.56■■□□□ 1.2
LETM1-202ENST00000466175 BARGINQ6ZT62 677 aa22.56■■□□□ 1.2
LETM1-202ENST00000466175 DDX21Q9NR30 783 aaKnown RBP eCLIP22.56■■□□□ 1.2
LETM1-202ENST00000466175 ADCY9O60503 1353 aa22.55■■□□□ 1.2
LETM1-202ENST00000466175 PNMA6EA0A0J9YXQ4 647 aa22.55■■□□□ 1.2
LETM1-202ENST00000466175 PDE1AP54750 535 aa22.55■■□□□ 1.2
LETM1-202ENST00000466175 POLA2Q14181 598 aa22.55■■□□□ 1.2
LETM1-202ENST00000466175 AOX1Q06278 1338 aa22.54■■□□□ 1.2
LETM1-202ENST00000466175 HSP90AB4PQ58FF6 505 aa22.54■■□□□ 1.2
LETM1-202ENST00000466175 FAM182BQ5T319 152 aa22.54■■□□□ 1.2
LETM1-202ENST00000466175 THRAP3Q9Y2W1 955 aaKnown RBP22.54■■□□□ 1.2
LETM1-202ENST00000466175 WNK3Q9BYP7 1800 aa22.54■■□□□ 1.2
LETM1-202ENST00000466175 APBB1O00213 710 aa22.53■■□□□ 1.2
LETM1-202ENST00000466175 SDSP20132 328 aa22.53■■□□□ 1.2
LETM1-202ENST00000466175 EXOC6BQ9Y2D4 811 aa22.53■■□□□ 1.2
LETM1-202ENST00000466175 SALL3Q9BXA9 1300 aa22.53■■□□□ 1.2
LETM1-202ENST00000466175 OTUD7AQ8TE49 926 aaPredicted RBP22.53■■□□□ 1.2
LETM1-202ENST00000466175 KRT27Q7Z3Y8 459 aa22.52■■□□□ 1.2
LETM1-202ENST00000466175 ANTXR1Q9H6X2 564 aa22.52■■□□□ 1.2
LETM1-202ENST00000466175 STAP2Q9UGK3 403 aa22.52■■□□□ 1.2
LETM1-202ENST00000466175 MTX1Q13505 466 aa22.5■■□□□ 1.19
LETM1-202ENST00000466175 PPP1R42Q7Z4L9 355 aa22.5■■□□□ 1.19
LETM1-202ENST00000466175 MAP3K2Q9Y2U5 619 aa22.5■■□□□ 1.19
LETM1-202ENST00000466175 REC8O95072 547 aa22.49■■□□□ 1.19
LETM1-202ENST00000466175 MX1P20591 662 aa22.49■■□□□ 1.19
LETM1-202ENST00000466175 TTC5Q8N0Z6 440 aa22.49■■□□□ 1.19
LETM1-202ENST00000466175 NFATC2IPQ8NCF5 419 aa22.49■■□□□ 1.19
LETM1-202ENST00000466175 LINS1Q8NG48 757 aa22.49■■□□□ 1.19
LETM1-202ENST00000466175 CYP27B1O15528 508 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms