RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 GRIP2Q9C0E4 1043 aa7.71□□□□□ -1.18
EXOSC3-204ENST00000465860 PRM3Q9NNZ6 103 aa7.71□□□□□ -1.18
EXOSC3-204ENST00000465860 RAB6BQ9NRW1 208 aa7.71□□□□□ -1.18
EXOSC3-204ENST00000465860 SIGLEC1Q9BZZ2 1709 aa7.71□□□□□ -1.18
EXOSC3-204ENST00000465860 FANCAO15360 1455 aa7.7□□□□□ -1.18
EXOSC3-204ENST00000465860 CCDC18Q5T9S5 1454 aa7.7□□□□□ -1.18
EXOSC3-204ENST00000465860 TSGA10IPQ3SY00 556 aa7.7□□□□□ -1.18
EXOSC3-204ENST00000465860 ESF1Q9H501 851 aaKnown RBP7.7□□□□□ -1.18
EXOSC3-204ENST00000465860 GDPD2Q9HCC8 539 aa7.7□□□□□ -1.18
EXOSC3-204ENST00000465860 PREX2Q70Z35 1606 aa7.7□□□□□ -1.18
EXOSC3-204ENST00000465860 PLCH2O75038 1416 aa7.69□□□□□ -1.18
EXOSC3-204ENST00000465860 AKNAQ7Z591 1439 aa7.69□□□□□ -1.18
EXOSC3-204ENST00000465860 EIF4G2P78344 907 aaKnown RBP eCLIP7.69□□□□□ -1.18
EXOSC3-204ENST00000465860 VAC14Q08AM6 782 aa7.69□□□□□ -1.18
EXOSC3-204ENST00000465860 PHTF2Q8N3S3 785 aa7.69□□□□□ -1.18
EXOSC3-204ENST00000465860 CFAP74Q9C0B2 1584 aa7.68□□□□□ -1.18
EXOSC3-204ENST00000465860 SPATA31C2B4DYI2 1134 aa7.68□□□□□ -1.18
EXOSC3-204ENST00000465860 GNRH1P01148 92 aa7.68□□□□□ -1.18
EXOSC3-204ENST00000465860 IL2RAP01589 272 aa7.68□□□□□ -1.18
EXOSC3-204ENST00000465860 SLURP2P0DP57 97 aa7.68□□□□□ -1.18
EXOSC3-204ENST00000465860 ZNF385CQ66K41 422 aaPredicted RBP7.68□□□□□ -1.18
EXOSC3-204ENST00000465860 WHAMMQ8TF30 809 aa7.68□□□□□ -1.18
EXOSC3-204ENST00000465860 ZNF837Q96EG3 531 aaPredicted RBP7.68□□□□□ -1.18
EXOSC3-204ENST00000465860 MYCP01106 439 aaPredicted RBP7.67□□□□□ -1.18
EXOSC3-204ENST00000465860 ABL2P42684 1182 aa7.67□□□□□ -1.18
EXOSC3-204ENST00000465860 GAS6Q14393 721 aa7.67□□□□□ -1.18
EXOSC3-204ENST00000465860 DBN1Q16643 649 aa7.67□□□□□ -1.18
EXOSC3-204ENST00000465860 NBPF10Q6P3W6 841 aaKnown RBP7.67□□□□□ -1.18
EXOSC3-204ENST00000465860 TRIM22Q8IYM9 498 aa7.67□□□□□ -1.18
EXOSC3-204ENST00000465860 NBPF15Q8N660 670 aa7.67□□□□□ -1.18
EXOSC3-204ENST00000465860 CNKSR1Q969H4 720 aa7.67□□□□□ -1.18
EXOSC3-204ENST00000465860 ESYT1Q9BSJ8 1104 aa7.67□□□□□ -1.18
EXOSC3-204ENST00000465860 DYRK1BQ9Y463 629 aa7.67□□□□□ -1.18
EXOSC3-204ENST00000465860 ADGRL1O94910 1474 aa7.67□□□□□ -1.18
EXOSC3-204ENST00000465860 ARHGEF12Q9NZN5 1544 aa7.67□□□□□ -1.18
EXOSC3-204ENST00000465860 MCM6Q14566 821 aa7.66□□□□□ -1.18
EXOSC3-204ENST00000465860 RIPOR1Q6ZS17 1223 aa7.66□□□□□ -1.18
EXOSC3-204ENST00000465860 GAS2L1Q99501 681 aaPredicted RBP7.66□□□□□ -1.18
EXOSC3-204ENST00000465860 DOLKQ9UPQ8 538 aa7.66□□□□□ -1.18
EXOSC3-204ENST00000465860 CDK11AQ9UQ88 783 aaPredicted RBP7.66□□□□□ -1.18
EXOSC3-204ENST00000465860 HRH3Q9Y5N1 445 aa7.66□□□□□ -1.18
EXOSC3-204ENST00000465860 SCAPERQ9BY12 1400 aa7.66□□□□□ -1.18
EXOSC3-204ENST00000465860 ARHGAP5Q13017 1502 aa7.66□□□□□ -1.18
EXOSC3-204ENST00000465860 TIAM1Q13009 1591 aa7.66□□□□□ -1.18
EXOSC3-204ENST00000465860 SAMD9LQ8IVG5 1584 aa7.66□□□□□ -1.18
EXOSC3-204ENST00000465860 ITSN2Q9NZM3 1697 aa7.66□□□□□ -1.18
EXOSC3-204ENST00000465860 GPR25O00155 361 aa7.65□□□□□ -1.18
EXOSC3-204ENST00000465860 WASLO00401 505 aaPredicted RBP7.65□□□□□ -1.18
EXOSC3-204ENST00000465860 DENND4BO75064 1496 aaPredicted RBP7.65□□□□□ -1.18
EXOSC3-204ENST00000465860 ADAMTS2O95450 1211 aa7.65□□□□□ -1.18
EXOSC3-204ENST00000465860 CENPCQ03188 943 aa7.65□□□□□ -1.18
EXOSC3-204ENST00000465860 SLFNL1Q499Z3 407 aa7.65□□□□□ -1.18
EXOSC3-204ENST00000465860 WDR44Q5JSH3 913 aa7.65□□□□□ -1.18
EXOSC3-204ENST00000465860 ZMYM4Q5VZL5 1548 aa7.65□□□□□ -1.18
EXOSC3-204ENST00000465860 TAS1R3Q7RTX0 852 aa7.65□□□□□ -1.18
EXOSC3-204ENST00000465860 PHLDB1Q86UU1 1377 aa7.65□□□□□ -1.18
EXOSC3-204ENST00000465860 RNF135Q8IUD6 432 aa7.65□□□□□ -1.18
EXOSC3-204ENST00000465860 VPS8Q8N3P4 1428 aa7.65□□□□□ -1.18
EXOSC3-204ENST00000465860 SVOPQ8N4V2 548 aa7.65□□□□□ -1.18
EXOSC3-204ENST00000465860 GMCL1Q96IK5 515 aa7.65□□□□□ -1.18
EXOSC3-204ENST00000465860 GPATCH8Q9UKJ3 1502 aaKnown RBP7.65□□□□□ -1.18
EXOSC3-204ENST00000465860 CHIC2Q9UKJ5 165 aa7.65□□□□□ -1.18
EXOSC3-204ENST00000465860 YEATS2Q9ULM3 1422 aa7.65□□□□□ -1.18
EXOSC3-204ENST00000465860 ADAMTS8Q9UP79 889 aa7.65□□□□□ -1.18
EXOSC3-204ENST00000465860 ABCC1P33527 1531 aa7.64□□□□□ -1.19
EXOSC3-204ENST00000465860 ARHGEF40Q8TER5 1519 aa7.64□□□□□ -1.19
EXOSC3-204ENST00000465860 POGZQ7Z3K3 1410 aa7.64□□□□□ -1.19
EXOSC3-204ENST00000465860 STAU1O95793 577 aaKnown RBP7.64□□□□□ -1.19
EXOSC3-204ENST00000465860 XAGE2Q96GT9 111 aa7.64□□□□□ -1.19
EXOSC3-204ENST00000465860 TIMMDC1Q9NPL8 285 aa7.64□□□□□ -1.19
EXOSC3-204ENST00000465860 EHBP1L1Q8N3D4 1523 aa7.63□□□□□ -1.19
EXOSC3-204ENST00000465860 TRAPPC8Q9Y2L5 1435 aa7.63□□□□□ -1.19
EXOSC3-204ENST00000465860 ARHGEF15O94989 841 aa7.63□□□□□ -1.19
EXOSC3-204ENST00000465860 GSK3AP49840 483 aa7.63□□□□□ -1.19
EXOSC3-204ENST00000465860 SRSF11Q05519 484 aaKnown RBP7.63□□□□□ -1.19
EXOSC3-204ENST00000465860 USP4Q13107 963 aa7.63□□□□□ -1.19
EXOSC3-204ENST00000465860 WASHC4Q2M389 1173 aa7.63□□□□□ -1.19
EXOSC3-204ENST00000465860 OXLD1Q5BKU9 147 aa7.63□□□□□ -1.19
EXOSC3-204ENST00000465860 KANK4Q5T7N3 995 aaPredicted RBP7.63□□□□□ -1.19
EXOSC3-204ENST00000465860 GTPBP3Q969Y2 492 aaKnown RBP7.63□□□□□ -1.19
EXOSC3-204ENST00000465860 FHDC1Q9C0D6 1143 aaPredicted RBP7.63□□□□□ -1.19
EXOSC3-204ENST00000465860 KDM5CP41229 1560 aa7.63□□□□□ -1.19
EXOSC3-204ENST00000465860 MTUS2Q5JR59 1369 aa7.62□□□□□ -1.19
EXOSC3-204ENST00000465860 BCORL1Q5H9F3 1711 aa7.62□□□□□ -1.19
EXOSC3-204ENST00000465860 H7C1W4 665 aa7.62□□□□□ -1.19
EXOSC3-204ENST00000465860 KCNMA1Q12791 1236 aa7.62□□□□□ -1.19
EXOSC3-204ENST00000465860 EFCAB2Q5VUJ9 269 aa7.62□□□□□ -1.19
EXOSC3-204ENST00000465860 LYPD4Q6UWN0 246 aa7.62□□□□□ -1.19
EXOSC3-204ENST00000465860 AFAP1Q8N556 730 aa7.62□□□□□ -1.19
EXOSC3-204ENST00000465860 ZSCAN10Q96SZ4 725 aaPredicted RBP7.62□□□□□ -1.19
EXOSC3-204ENST00000465860 ETNK1Q9HBU6 452 aa7.62□□□□□ -1.19
EXOSC3-204ENST00000465860 ADAMTSL3P82987 1691 aa7.62□□□□□ -1.19
EXOSC3-204ENST00000465860 ABCA6Q8N139 1617 aa7.62□□□□□ -1.19
EXOSC3-204ENST00000465860 SYCP2Q9BX26 1530 aa7.62□□□□□ -1.19
EXOSC3-204ENST00000465860 KIDINS220Q9ULH0 1771 aa7.61□□□□□ -1.19
EXOSC3-204ENST00000465860 SUPT6HQ7KZ85 1726 aaKnown RBP7.61□□□□□ -1.19
EXOSC3-204ENST00000465860 ZNF644Q9H582 1327 aaPredicted RBP7.61□□□□□ -1.19
EXOSC3-204ENST00000465860 F11P03951 625 aa7.61□□□□□ -1.19
EXOSC3-204ENST00000465860 PHKA2P46019 1235 aa7.61□□□□□ -1.19
EXOSC3-204ENST00000465860 MBIPQ9NS73 344 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms