RNA–Protein interactions for RNA: ENST00000465705.3

TMCO1-204, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 5

Gene TMCO1, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-204ENST00000465705 HMGB2P26583 209 aaKnown RBP14.8□□□□□ -0.04
TMCO1-204ENST00000465705 TRIM35Q9UPQ4 493 aa14.8□□□□□ -0.04
TMCO1-204ENST00000465705 ATP6V1AP38606 617 aa14.79□□□□□ -0.04
TMCO1-204ENST00000465705 TAF7Q15545 349 aaPredicted RBP14.79□□□□□ -0.04
TMCO1-204ENST00000465705 ZNF831Q5JPB2 1677 aa14.79□□□□□ -0.04
TMCO1-204ENST00000465705 ZNF790Q6PG37 636 aa14.79□□□□□ -0.04
TMCO1-204ENST00000465705 KCPQ6ZWJ8 1503 aa14.79□□□□□ -0.04
TMCO1-204ENST00000465705 UBR2Q8IWV8 1755 aa14.79□□□□□ -0.04
TMCO1-204ENST00000465705 SENP3-EIF4A1A0A087X0R7 540 aa14.78□□□□□ -0.04
TMCO1-204ENST00000465705 NUBP1P53384 320 aa14.78□□□□□ -0.04
TMCO1-204ENST00000465705 STK32BQ9NY57 414 aa14.78□□□□□ -0.04
TMCO1-204ENST00000465705 ANO8Q9HCE9 1232 aaPredicted RBP14.77□□□□□ -0.05
TMCO1-204ENST00000465705 TAF1LQ8IZX4 1826 aa14.77□□□□□ -0.05
TMCO1-204ENST00000465705 CICQ96RK0 1608 aaPredicted RBP14.77□□□□□ -0.05
TMCO1-204ENST00000465705 KDM3BQ7LBC6 1761 aa14.76□□□□□ -0.05
TMCO1-204ENST00000465705 C4BP0C0L5 1744 aa14.76□□□□□ -0.05
TMCO1-204ENST00000465705 GALR2O43603 387 aaPredicted RBP14.76□□□□□ -0.05
TMCO1-204ENST00000465705 CALD1Q05682 793 aaKnown RBP14.76□□□□□ -0.05
TMCO1-204ENST00000465705 FMNL2Q96PY5 1086 aa14.76□□□□□ -0.05
TMCO1-204ENST00000465705 TJP1Q07157 1748 aa14.75□□□□□ -0.05
TMCO1-204ENST00000465705 ITPK1Q13572 414 aa14.75□□□□□ -0.05
TMCO1-204ENST00000465705 R3HDM1Q15032 1099 aaKnown RBP14.75□□□□□ -0.05
TMCO1-204ENST00000465705 CCDC27Q2M243 656 aa14.75□□□□□ -0.05
TMCO1-204ENST00000465705 KLHL34Q8N239 644 aa14.75□□□□□ -0.05
TMCO1-204ENST00000465705 LINC00116Q8NCU8 138 aa14.75□□□□□ -0.05
TMCO1-204ENST00000465705 ZNF496Q96IT1 587 aaPredicted RBP14.75□□□□□ -0.05
TMCO1-204ENST00000465705 SLC4A9Q96Q91 983 aa14.75□□□□□ -0.05
TMCO1-204ENST00000465705 MIS18AQ9NYP9 233 aa14.75□□□□□ -0.05
TMCO1-204ENST00000465705 TSPYL4Q9UJ04 414 aa14.75□□□□□ -0.05
TMCO1-204ENST00000465705 LAS1LQ9Y4W2 734 aaKnown RBP14.75□□□□□ -0.05
TMCO1-204ENST00000465705 COL5A3P25940 1745 aaPredicted RBP14.75□□□□□ -0.05
TMCO1-204ENST00000465705 HEG1Q9ULI3 1381 aa14.74□□□□□ -0.05
TMCO1-204ENST00000465705 PSDA5PKW4 1024 aaPredicted RBP14.74□□□□□ -0.05
TMCO1-204ENST00000465705 KCNQ3O43525 872 aa14.74□□□□□ -0.05
TMCO1-204ENST00000465705 SLC15A2Q16348 729 aa14.74□□□□□ -0.05
TMCO1-204ENST00000465705 ZNF827Q17R98 1081 aa14.74□□□□□ -0.05
TMCO1-204ENST00000465705 VSIG10Q8N0Z9 540 aa14.74□□□□□ -0.05
TMCO1-204ENST00000465705 NGEFQ8N5V2 710 aa14.74□□□□□ -0.05
TMCO1-204ENST00000465705 AK7Q96M32 723 aa14.74□□□□□ -0.05
TMCO1-204ENST00000465705 BABAM1Q9NWV8 329 aa14.74□□□□□ -0.05
TMCO1-204ENST00000465705 SALL2Q9Y467 1007 aaPredicted RBP14.74□□□□□ -0.05
TMCO1-204ENST00000465705 CLCN6P51797 869 aa14.73□□□□□ -0.05
TMCO1-204ENST00000465705 WWC1Q8IX03 1113 aa14.73□□□□□ -0.05
TMCO1-204ENST00000465705 DNAJC10Q8IXB1 793 aa14.73□□□□□ -0.05
TMCO1-204ENST00000465705 TFCP2L1Q9NZI6 479 aa14.73□□□□□ -0.05
TMCO1-204ENST00000465705 CNTNAP4Q9C0A0 1308 aa14.71□□□□□ -0.05
TMCO1-204ENST00000465705 CHL1O00533 1208 aa14.71□□□□□ -0.05
TMCO1-204ENST00000465705 GNPATO15228 680 aa14.71□□□□□ -0.05
TMCO1-204ENST00000465705 CFAP44Q96MT7 982 aa14.71□□□□□ -0.05
TMCO1-204ENST00000465705 IFT57Q9NWB7 429 aa14.71□□□□□ -0.05
TMCO1-204ENST00000465705 QSER1Q2KHR3 1735 aa14.7□□□□□ -0.06
TMCO1-204ENST00000465705 STARD3NLO95772 234 aa14.7□□□□□ -0.06
TMCO1-204ENST00000465705 SNRPA1P09661 255 aaKnown RBP14.7□□□□□ -0.06
TMCO1-204ENST00000465705 CRKLP46109 303 aaKnown RBP14.7□□□□□ -0.06
TMCO1-204ENST00000465705 EIF4A1P60842 406 aaKnown RBP14.7□□□□□ -0.06
TMCO1-204ENST00000465705 GNAI1P63096 354 aa14.7□□□□□ -0.06
TMCO1-204ENST00000465705 TEX13AQ9BXU3 409 aaPredicted RBP14.7□□□□□ -0.06
TMCO1-204ENST00000465705 TUBGCP6Q96RT7 1819 aa14.7□□□□□ -0.06
TMCO1-204ENST00000465705 RC3H1Q5TC82 1133 aaKnown RBP14.69□□□□□ -0.06
TMCO1-204ENST00000465705 LAMB4A4D0S4 1761 aa14.69□□□□□ -0.06
TMCO1-204ENST00000465705 IL16Q14005 1332 aa14.68□□□□□ -0.06
TMCO1-204ENST00000465705 UBR3Q6ZT12 1888 aa14.68□□□□□ -0.06
TMCO1-204ENST00000465705 PHF14O94880 888 aa14.68□□□□□ -0.06
TMCO1-204ENST00000465705 ZNF853P0CG23 659 aa14.68□□□□□ -0.06
TMCO1-204ENST00000465705 CYP19A1P11511 503 aaPredicted RBP14.68□□□□□ -0.06
TMCO1-204ENST00000465705 IFNLR1Q8IU57 520 aaPredicted RBP14.68□□□□□ -0.06
TMCO1-204ENST00000465705 WDR63Q8IWG1 891 aa14.68□□□□□ -0.06
TMCO1-204ENST00000465705 MBIPQ9NS73 344 aa14.68□□□□□ -0.06
TMCO1-204ENST00000465705 CCDC87Q9NVE4 849 aa14.68□□□□□ -0.06
TMCO1-204ENST00000465705 RTCBQ9Y3I0 505 aaKnown RBP14.68□□□□□ -0.06
TMCO1-204ENST00000465705 CASZ1Q86V15 1759 aa14.68□□□□□ -0.06
TMCO1-204ENST00000465705 PNPLA7Q6ZV29 1317 aa14.67□□□□□ -0.06
TMCO1-204ENST00000465705 PRAMEF22A3QJZ6 481 aa14.67□□□□□ -0.06
TMCO1-204ENST00000465705 GIGYF1O75420 1035 aaPredicted RBP14.67□□□□□ -0.06
TMCO1-204ENST00000465705 POTEIP0CG38 1075 aa14.67□□□□□ -0.06
TMCO1-204ENST00000465705 SSFA2P28290 1259 aa14.67□□□□□ -0.06
TMCO1-204ENST00000465705 FLAD1Q8NFF5 587 aa14.67□□□□□ -0.06
TMCO1-204ENST00000465705 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.66□□□□□ -0.06
TMCO1-204ENST00000465705 INTS5Q6P9B9 1019 aaKnown RBP14.66□□□□□ -0.06
TMCO1-204ENST00000465705 FAM212AQ96EL1 285 aa14.66□□□□□ -0.06
TMCO1-204ENST00000465705 MS4A3Q96HJ5 214 aa14.66□□□□□ -0.06
TMCO1-204ENST00000465705 ZBTB1Q9Y2K1 713 aa14.66□□□□□ -0.06
TMCO1-204ENST00000465705 USP16Q9Y5T5 823 aa14.66□□□□□ -0.06
TMCO1-204ENST00000465705 MYH14Q7Z406 1995 aaKnown RBP14.65□□□□□ -0.06
TMCO1-204ENST00000465705 RPS6KA4O75676 772 aa14.65□□□□□ -0.06
TMCO1-204ENST00000465705 AMIGO3Q86WK7 504 aa14.65□□□□□ -0.06
TMCO1-204ENST00000465705 TSR2Q969E8 191 aaKnown RBP14.65□□□□□ -0.06
TMCO1-204ENST00000465705 PDGFDQ9GZP0 370 aaPredicted RBP14.65□□□□□ -0.06
TMCO1-204ENST00000465705 ZNF521Q96K83 1311 aa14.65□□□□□ -0.06
TMCO1-204ENST00000465705 CANXP27824 592 aaKnown RBP14.64□□□□□ -0.07
TMCO1-204ENST00000465705 TRAPPC3LQ5T215 181 aa14.64□□□□□ -0.07
TMCO1-204ENST00000465705 COL23A1Q86Y22 540 aaPredicted RBP14.64□□□□□ -0.07
TMCO1-204ENST00000465705 DCBLD2Q96PD2 775 aa14.64□□□□□ -0.07
TMCO1-204ENST00000465705 SOS1Q07889 1333 aaPredicted RBP14.64□□□□□ -0.07
TMCO1-204ENST00000465705 A1BGP04217 495 aa14.63□□□□□ -0.07
TMCO1-204ENST00000465705 HNRNPUQ00839 825 aaKnown RBP eCLIP14.63□□□□□ -0.07
TMCO1-204ENST00000465705 KRT24Q2M2I5 525 aa14.63□□□□□ -0.07
TMCO1-204ENST00000465705 SMIM5Q71RC9 77 aa14.63□□□□□ -0.07
TMCO1-204ENST00000465705 NPM2Q86SE8 214 aaKnown RBP14.63□□□□□ -0.07
TMCO1-204ENST00000465705 KIF12Q96FN5 646 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms