RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 TATP17735 454 aaPredicted RBP11.55□□□□□ -0.56
SMC4-205ENST00000465563 ARSJQ5FYB0 599 aaPredicted RBP11.55□□□□□ -0.56
SMC4-205ENST00000465563 ZCCHC2Q9C0B9 1178 aaKnown RBP11.55□□□□□ -0.56
SMC4-205ENST00000465563 DNAAF2Q9NVR5 837 aaKnown RBP11.55□□□□□ -0.56
SMC4-205ENST00000465563 USP3Q9Y6I4 520 aa11.55□□□□□ -0.56
SMC4-205ENST00000465563 HDGFL1Q5TGJ6 251 aa11.54□□□□□ -0.56
SMC4-205ENST00000465563 TRIM50Q86XT4 487 aa11.54□□□□□ -0.56
SMC4-205ENST00000465563 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.54□□□□□ -0.56
SMC4-205ENST00000465563 ADAMTS19Q8TE59 1207 aa11.54□□□□□ -0.56
SMC4-205ENST00000465563 ZNF358Q9NW07 568 aa11.54□□□□□ -0.56
SMC4-205ENST00000465563 ZDHHC3Q9NYG2 299 aa11.54□□□□□ -0.56
SMC4-205ENST00000465563 A0A1W2PNR3 127 aa11.53□□□□□ -0.56
SMC4-205ENST00000465563 CTBSQ01459 385 aa11.53□□□□□ -0.56
SMC4-205ENST00000465563 GOLGA6L1Q8N7Z2 621 aa11.53□□□□□ -0.56
SMC4-205ENST00000465563 GALNT6Q8NCL4 622 aa11.53□□□□□ -0.56
SMC4-205ENST00000465563 SCHIP1Q9P0W5 487 aaPredicted RBP11.53□□□□□ -0.56
SMC4-205ENST00000465563 C2CD2LO14523 706 aa11.52□□□□□ -0.57
SMC4-205ENST00000465563 ATXN7O15265 892 aaPredicted RBP11.52□□□□□ -0.57
SMC4-205ENST00000465563 TMEM132AQ24JP5 1023 aa11.51□□□□□ -0.57
SMC4-205ENST00000465563 PLEKHM2Q8IWE5 1019 aa11.51□□□□□ -0.57
SMC4-205ENST00000465563 USP17L3A6NCW0 530 aa11.5□□□□□ -0.57
SMC4-205ENST00000465563 USP17L4A6NCW7 530 aa11.5□□□□□ -0.57
SMC4-205ENST00000465563 SHISA8B8ZZ34 492 aa11.5□□□□□ -0.57
SMC4-205ENST00000465563 USP17L2Q6R6M4 530 aa11.5□□□□□ -0.57
SMC4-205ENST00000465563 C1orf229Q6ZS94 237 aaPredicted RBP11.5□□□□□ -0.57
SMC4-205ENST00000465563 USP17L1Q7RTZ2 530 aa11.5□□□□□ -0.57
SMC4-205ENST00000465563 EDARADDQ8WWZ3 215 aa11.5□□□□□ -0.57
SMC4-205ENST00000465563 ZIC5Q96T25 663 aa11.5□□□□□ -0.57
SMC4-205ENST00000465563 PARP3Q9Y6F1 533 aa11.5□□□□□ -0.57
SMC4-205ENST00000465563 ATP1A2P50993 1020 aa11.49□□□□□ -0.57
SMC4-205ENST00000465563 FOXK2Q01167 660 aa11.49□□□□□ -0.57
SMC4-205ENST00000465563 UCN2Q96RP3 112 aa11.49□□□□□ -0.57
SMC4-205ENST00000465563 GJA3Q9Y6H8 435 aa11.49□□□□□ -0.57
SMC4-205ENST00000465563 ATP9BO43861 1147 aa11.48□□□□□ -0.57
SMC4-205ENST00000465563 GPAT2Q6NUI2 795 aa11.48□□□□□ -0.57
SMC4-205ENST00000465563 SLCO4C1Q6ZQN7 724 aa11.48□□□□□ -0.57
SMC4-205ENST00000465563 GGA1Q9UJY5 639 aa11.48□□□□□ -0.57
SMC4-205ENST00000465563 IGHA1P01876 353 aa11.47□□□□□ -0.57
SMC4-205ENST00000465563 MAPTP10636 758 aaKnown RBP11.47□□□□□ -0.57
SMC4-205ENST00000465563 EPHA4P54764 986 aa11.47□□□□□ -0.57
SMC4-205ENST00000465563 TNP2Q05952 138 aa11.47□□□□□ -0.57
SMC4-205ENST00000465563 TEAD4Q15561 434 aa11.47□□□□□ -0.57
SMC4-205ENST00000465563 BICDL1Q6ZP65 573 aa11.47□□□□□ -0.57
SMC4-205ENST00000465563 TNS4Q8IZW8 715 aa11.47□□□□□ -0.57
SMC4-205ENST00000465563 TPCN2Q8NHX9 752 aa11.47□□□□□ -0.57
SMC4-205ENST00000465563 L3MBTL2Q969R5 705 aa11.47□□□□□ -0.57
SMC4-205ENST00000465563 DCDC2BA2VCK2 349 aa11.46□□□□□ -0.57
SMC4-205ENST00000465563 KHNYNO15037 678 aaKnown RBP11.46□□□□□ -0.57
SMC4-205ENST00000465563 ZBTB7BO15156 539 aaPredicted RBP11.46□□□□□ -0.57
SMC4-205ENST00000465563 ARAFP10398 606 aa11.46□□□□□ -0.57
SMC4-205ENST00000465563 SNRPNP63162 240 aaKnown RBP11.46□□□□□ -0.57
SMC4-205ENST00000465563 CCDC102BQ68D86 513 aa11.46□□□□□ -0.57
SMC4-205ENST00000465563 SLC9A9Q8IVB4 645 aa11.46□□□□□ -0.57
SMC4-205ENST00000465563 ZDHHC1Q8WTX9 485 aa11.46□□□□□ -0.57
SMC4-205ENST00000465563 DCAF5Q96JK2 942 aa11.46□□□□□ -0.57
SMC4-205ENST00000465563 RRAGCQ9HB90 399 aa11.46□□□□□ -0.57
SMC4-205ENST00000465563 NOS2P35228 1153 aa11.45□□□□□ -0.58
SMC4-205ENST00000465563 TXLNAP40222 546 aa11.45□□□□□ -0.58
SMC4-205ENST00000465563 CLDN10P78369 228 aa11.45□□□□□ -0.58
SMC4-205ENST00000465563 FAM182BQ5T319 152 aa11.45□□□□□ -0.58
SMC4-205ENST00000465563 CLUAP1Q96AJ1 413 aa11.45□□□□□ -0.58
SMC4-205ENST00000465563 MKL2Q9ULH7 1088 aa11.45□□□□□ -0.58
SMC4-205ENST00000465563 FAM157BP0CG42 384 aa11.44□□□□□ -0.58
SMC4-205ENST00000465563 AMPD1P23109 780 aa11.44□□□□□ -0.58
SMC4-205ENST00000465563 MKRN1Q9UHC7 482 aaKnown RBP11.44□□□□□ -0.58
SMC4-205ENST00000465563 ZNF232Q9UNY5 417 aa11.44□□□□□ -0.58
SMC4-205ENST00000465563 KIAA1024Q9UPX6 916 aa11.44□□□□□ -0.58
SMC4-205ENST00000465563 EPXP11678 715 aa11.43□□□□□ -0.58
SMC4-205ENST00000465563 CD33P20138 364 aa11.43□□□□□ -0.58
SMC4-205ENST00000465563 TBCELQ5QJ74 424 aa11.43□□□□□ -0.58
SMC4-205ENST00000465563 SAMD5Q5TGI4 173 aa11.43□□□□□ -0.58
SMC4-205ENST00000465563 PROSER2Q86WR7 435 aaPredicted RBP11.43□□□□□ -0.58
SMC4-205ENST00000465563 LARGE2Q8N3Y3 721 aa11.43□□□□□ -0.58
SMC4-205ENST00000465563 OGFOD1Q8N543 542 aa11.43□□□□□ -0.58
SMC4-205ENST00000465563 PALM3A6NDB9 673 aaPredicted RBP11.42□□□□□ -0.58
SMC4-205ENST00000465563 NEURL1BA8MQ27 555 aa11.42□□□□□ -0.58
SMC4-205ENST00000465563 FNBP4Q8N3X1 1017 aaPredicted RBP11.42□□□□□ -0.58
SMC4-205ENST00000465563 SERTM1A2A2V5 107 aa11.41□□□□□ -0.58
SMC4-205ENST00000465563 GLMNQ92990 594 aa11.41□□□□□ -0.58
SMC4-205ENST00000465563 HCN2Q9UL51 889 aa11.41□□□□□ -0.58
SMC4-205ENST00000465563 EML1O00423 815 aa11.4□□□□□ -0.58
SMC4-205ENST00000465563 ADH6P28332 368 aa11.4□□□□□ -0.58
SMC4-205ENST00000465563 BTBD6Q96KE9 485 aa11.4□□□□□ -0.58
SMC4-205ENST00000465563 NEUROD4Q9HD90 331 aa11.4□□□□□ -0.58
SMC4-205ENST00000465563 AVENQ9NQS1 362 aaPredicted RBP11.4□□□□□ -0.58
SMC4-205ENST00000465563 RBM19Q9Y4C8 960 aaKnown RBP11.4□□□□□ -0.58
SMC4-205ENST00000465563 GPC6Q9Y625 555 aaPredicted RBP11.4□□□□□ -0.58
SMC4-205ENST00000465563 M0R2N6 131 aa11.39□□□□□ -0.59
SMC4-205ENST00000465563 LAMC2Q13753 1193 aa11.39□□□□□ -0.59
SMC4-205ENST00000465563 PLA2G4EQ3MJ16 856 aa11.39□□□□□ -0.59
SMC4-205ENST00000465563 LRRC69Q6ZNQ3 347 aa11.39□□□□□ -0.59
SMC4-205ENST00000465563 MARK1Q9P0L2 795 aa11.39□□□□□ -0.59
SMC4-205ENST00000465563 PRR12Q9ULL5 1215 aa11.39□□□□□ -0.59
SMC4-205ENST00000465563 CHMP3Q9Y3E7 222 aa11.39□□□□□ -0.59
SMC4-205ENST00000465563 EFSO43281 561 aa11.38□□□□□ -0.59
SMC4-205ENST00000465563 PSMA6P60900 246 aaKnown RBP11.38□□□□□ -0.59
SMC4-205ENST00000465563 SUZ12Q15022 739 aaKnown RBP11.38□□□□□ -0.59
SMC4-205ENST00000465563 SIX5Q8N196 739 aa11.38□□□□□ -0.59
SMC4-205ENST00000465563 ZNF594Q96JF6 807 aaPredicted RBP11.38□□□□□ -0.59
SMC4-205ENST00000465563 TSPAN10Q9H1Z9 355 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms