RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 TEFQ10587 303 aa28.01■■■□□ 2.07
CSPG5-204ENST00000465441 ARHGAP27Q6ZUM4 889 aa28.01■■■□□ 2.07
CSPG5-204ENST00000465441 TTC5Q8N0Z6 440 aa28.01■■■□□ 2.07
CSPG5-204ENST00000465441 NARFQ9UHQ1 456 aa28.01■■■□□ 2.07
CSPG5-204ENST00000465441 CANXP27824 592 aaKnown RBP27.99■■■□□ 2.07
CSPG5-204ENST00000465441 RSPH6AQ9H0K4 717 aa27.99■■■□□ 2.07
CSPG5-204ENST00000465441 PIM2Q9P1W9 311 aa27.99■■■□□ 2.07
CSPG5-204ENST00000465441 PPP2R1AP30153 589 aa27.98■■■□□ 2.07
CSPG5-204ENST00000465441 PRKAR2BP31323 418 aa27.98■■■□□ 2.07
CSPG5-204ENST00000465441 ZNF790Q6PG37 636 aa27.98■■■□□ 2.07
CSPG5-204ENST00000465441 ZNF496Q96IT1 587 aaPredicted RBP27.98■■■□□ 2.07
CSPG5-204ENST00000465441 STARD3NLO95772 234 aa27.97■■■□□ 2.07
CSPG5-204ENST00000465441 BCL2L12Q9HB09 334 aa27.97■■■□□ 2.07
CSPG5-204ENST00000465441 NUDCQ9Y266 331 aa27.97■■■□□ 2.07
CSPG5-204ENST00000465441 COL15A1P39059 1388 aa27.97■■■□□ 2.07
CSPG5-204ENST00000465441 NFIXQ14938 502 aa27.96■■■□□ 2.07
CSPG5-204ENST00000465441 CHRNA5P30532 468 aa27.95■■■□□ 2.06
CSPG5-204ENST00000465441 EIF5P55010 431 aaKnown RBP27.94■■■□□ 2.06
CSPG5-204ENST00000465441 TEX13AQ9BXU3 409 aaPredicted RBP27.94■■■□□ 2.06
CSPG5-204ENST00000465441 U2AF1L5P0DN76 240 aaPredicted RBP27.93■■■□□ 2.06
CSPG5-204ENST00000465441 U2AF1Q01081 240 aaKnown RBP eCLIP27.93■■■□□ 2.06
CSPG5-204ENST00000465441 DALRD3Q5D0E6 543 aaKnown RBP27.93■■■□□ 2.06
CSPG5-204ENST00000465441 HEG1Q9ULI3 1381 aa27.93■■■□□ 2.06
CSPG5-204ENST00000465441 KCNQ3O43525 872 aa27.92■■■□□ 2.06
CSPG5-204ENST00000465441 UBR2Q8IWV8 1755 aa27.91■■■□□ 2.06
CSPG5-204ENST00000465441 CEMIPQ8WUJ3 1361 aa27.91■■■□□ 2.06
CSPG5-204ENST00000465441 SERPINB2P05120 415 aa27.91■■■□□ 2.06
CSPG5-204ENST00000465441 BRCA1P38398 1863 aaKnown RBP27.91■■■□□ 2.06
CSPG5-204ENST00000465441 BTBD11A6QL63 1104 aa27.9■■■□□ 2.06
CSPG5-204ENST00000465441 FMNL2Q96PY5 1086 aa27.9■■■□□ 2.06
CSPG5-204ENST00000465441 A0A087WZG4 1122 aa27.89■■■□□ 2.06
CSPG5-204ENST00000465441 KIF3CO14782 793 aa27.89■■■□□ 2.06
CSPG5-204ENST00000465441 A1BGP04217 495 aa27.87■■■□□ 2.05
CSPG5-204ENST00000465441 BICDL1Q6ZP65 573 aa27.87■■■□□ 2.05
CSPG5-204ENST00000465441 SIPA1L3O60292 1781 aaPredicted RBP27.86■■■□□ 2.05
CSPG5-204ENST00000465441 C9orf131Q5VYM1 1079 aa27.86■■■□□ 2.05
CSPG5-204ENST00000465441 TBC1D2BQ9UPU7 963 aa27.86■■■□□ 2.05
CSPG5-204ENST00000465441 IL6STP40189 918 aaPredicted RBP27.85■■■□□ 2.05
CSPG5-204ENST00000465441 MCM10Q7L590 875 aa27.85■■■□□ 2.05
CSPG5-204ENST00000465441 RTF1Q92541 710 aaKnown RBP27.85■■■□□ 2.05
CSPG5-204ENST00000465441 ZNF330Q9Y3S2 320 aaPredicted RBP27.85■■■□□ 2.05
CSPG5-204ENST00000465441 AFDNP55196 1824 aaKnown RBP27.84■■■□□ 2.05
CSPG5-204ENST00000465441 TBC1D9BQ66K14 1250 aa27.84■■■□□ 2.05
CSPG5-204ENST00000465441 USP16Q9Y5T5 823 aa27.84■■■□□ 2.05
CSPG5-204ENST00000465441 ARFGEF1Q9Y6D6 1849 aa27.83■■■□□ 2.05
CSPG5-204ENST00000465441 DCTN1Q14203 1278 aa27.82■■■□□ 2.04
CSPG5-204ENST00000465441 PRAMEF22A3QJZ6 481 aa27.8■■■□□ 2.04
CSPG5-204ENST00000465441 HSPA6P17066 643 aa27.8■■■□□ 2.04
CSPG5-204ENST00000465441 NRXN2Q9P2S2 1712 aa27.8■■■□□ 2.04
CSPG5-204ENST00000465441 HTATSF1O43719 755 aaKnown RBP27.79■■■□□ 2.04
CSPG5-204ENST00000465441 NPM2Q86SE8 214 aaKnown RBP27.79■■■□□ 2.04
CSPG5-204ENST00000465441 C2CD5Q86YS7 1000 aa27.79■■■□□ 2.04
CSPG5-204ENST00000465441 NMRK2Q9NPI5 230 aa27.78■■■□□ 2.04
CSPG5-204ENST00000465441 RNF181Q9P0P0 153 aa27.78■■■□□ 2.04
CSPG5-204ENST00000465441 H0YIN7 160 aa27.77■■■□□ 2.04
CSPG5-204ENST00000465441 CAMTA2O94983 1202 aa27.77■■■□□ 2.04
CSPG5-204ENST00000465441 TTLL6Q8N841 843 aa27.77■■■□□ 2.04
CSPG5-204ENST00000465441 CARMIL3Q8ND23 1372 aa27.76■■■□□ 2.03
CSPG5-204ENST00000465441 SNRPA1P09661 255 aaKnown RBP27.76■■■□□ 2.03
CSPG5-204ENST00000465441 PIP4K2AP48426 406 aaPredicted RBP27.76■■■□□ 2.03
CSPG5-204ENST00000465441 TAF7Q15545 349 aaPredicted RBP27.75■■■□□ 2.03
CSPG5-204ENST00000465441 CCDC24Q8N4L8 307 aa27.75■■■□□ 2.03
CSPG5-204ENST00000465441 TOMM70O94826 608 aa27.74■■■□□ 2.03
CSPG5-204ENST00000465441 PRR5LQ6MZQ0 368 aa27.74■■■□□ 2.03
CSPG5-204ENST00000465441 DZIP3Q86Y13 1208 aaKnown RBP27.74■■■□□ 2.03
CSPG5-204ENST00000465441 SETDB2Q96T68 719 aa27.73■■■□□ 2.03
CSPG5-204ENST00000465441 BRIP1Q9BX63 1249 aa27.73■■■□□ 2.03
CSPG5-204ENST00000465441 RASSF7Q02833 373 aa27.72■■■□□ 2.03
CSPG5-204ENST00000465441 MIS18AQ9NYP9 233 aa27.72■■■□□ 2.03
CSPG5-204ENST00000465441 PDE6BP35913 854 aa27.71■■■□□ 2.03
CSPG5-204ENST00000465441 ZNF622Q969S3 477 aaKnown RBP eCLIP27.71■■■□□ 2.03
CSPG5-204ENST00000465441 NEFMP07197 916 aa27.7■■■□□ 2.02
CSPG5-204ENST00000465441 PLEKHF1Q96S99 279 aa27.7■■■□□ 2.02
CSPG5-204ENST00000465441 PDZRN3Q9UPQ7 1066 aa27.7■■■□□ 2.02
CSPG5-204ENST00000465441 SBF1O95248 1867 aa27.7■■■□□ 2.02
CSPG5-204ENST00000465441 PRELPP51888 382 aa27.69■■■□□ 2.02
CSPG5-204ENST00000465441 NBPF26B4DH59 902 aa27.68■■■□□ 2.02
CSPG5-204ENST00000465441 NBPF10Q6P3W6 841 aaKnown RBP27.68■■■□□ 2.02
CSPG5-204ENST00000465441 NBPF15Q8N660 670 aa27.68■■■□□ 2.02
CSPG5-204ENST00000465441 RRAGCQ9HB90 399 aa27.68■■■□□ 2.02
CSPG5-204ENST00000465441 KDM2BQ8NHM5 1336 aa27.67■■■□□ 2.02
CSPG5-204ENST00000465441 LMNB1P20700 586 aa27.67■■■□□ 2.02
CSPG5-204ENST00000465441 CLEC4GQ6UXB4 293 aa27.67■■■□□ 2.02
CSPG5-204ENST00000465441 SCN7AQ01118 1682 aa27.67■■■□□ 2.02
CSPG5-204ENST00000465441 CNBD1Q8NA66 436 aa27.66■■■□□ 2.02
CSPG5-204ENST00000465441 DLEC1Q9Y238 1755 aa27.65■■■□□ 2.02
CSPG5-204ENST00000465441 NPHP1O15259 732 aa27.65■■■□□ 2.02
CSPG5-204ENST00000465441 ANKRD31Q8N7Z5 1873 aa27.64■■■□□ 2.02
CSPG5-204ENST00000465441 NFKBIEO00221 500 aa27.64■■■□□ 2.02
CSPG5-204ENST00000465441 NFE2L2Q16236 605 aa27.64■■■□□ 2.02
CSPG5-204ENST00000465441 C16orf71Q8IYS4 520 aaPredicted RBP27.64■■■□□ 2.02
CSPG5-204ENST00000465441 ZNF219Q9P2Y4 722 aaPredicted RBP27.64■■■□□ 2.02
CSPG5-204ENST00000465441 C21orf2O43822 256 aa27.63■■■□□ 2.01
CSPG5-204ENST00000465441 ST5P78524 1137 aa27.63■■■□□ 2.01
CSPG5-204ENST00000465441 RBM46Q8TBY0 533 aaKnown RBP27.63■■■□□ 2.01
CSPG5-204ENST00000465441 PNISRQ8TF01 805 aaKnown RBP27.63■■■□□ 2.01
CSPG5-204ENST00000465441 PNNQ9H307 717 aaKnown RBP27.62■■■□□ 2.01
CSPG5-204ENST00000465441 ZNF652Q9Y2D9 606 aa27.62■■■□□ 2.01
CSPG5-204ENST00000465441 THUMPD2Q9BTF0 503 aaKnown RBP27.61■■■□□ 2.01
CSPG5-204ENST00000465441 ZC3H4Q9UPT8 1303 aaKnown RBP27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms