RNA–Protein interactions for RNA: ENST00000465309.6

LMO7-208, Transcript of LIM domain 7, humanhuman

TSL 3

Gene LMO7, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-208ENST00000465309 PITPNM1O00562 1244 aa9.29□□□□□ -0.92
LMO7-208ENST00000465309 SRPK2P78362 688 aaKnown RBP9.29□□□□□ -0.92
LMO7-208ENST00000465309 MAP1SQ66K74 1059 aaPredicted RBP9.29□□□□□ -0.92
LMO7-208ENST00000465309 MPRIPQ6WCQ1 1025 aa9.29□□□□□ -0.92
LMO7-208ENST00000465309 IQCA1LA6NCM1 817 aa9.28□□□□□ -0.92
LMO7-208ENST00000465309 NBPF1Q3BBV0 1214 aa9.28□□□□□ -0.92
LMO7-208ENST00000465309 IFNLR1Q8IU57 520 aaPredicted RBP9.28□□□□□ -0.92
LMO7-208ENST00000465309 TAF1DQ9H5J8 278 aaPredicted RBP9.28□□□□□ -0.92
LMO7-208ENST00000465309 SCN4AP35499 1836 aa9.28□□□□□ -0.92
LMO7-208ENST00000465309 ZNF316A6NFI3 1004 aaPredicted RBP9.27□□□□□ -0.93
LMO7-208ENST00000465309 NFKBIEO00221 500 aa9.27□□□□□ -0.93
LMO7-208ENST00000465309 NEUROD1Q13562 356 aa9.27□□□□□ -0.93
LMO7-208ENST00000465309 CNTROBQ8N137 903 aa9.27□□□□□ -0.93
LMO7-208ENST00000465309 ZCRB1Q8TBF4 217 aaKnown RBP9.27□□□□□ -0.93
LMO7-208ENST00000465309 LTV1Q96GA3 475 aaPredicted RBP9.27□□□□□ -0.93
LMO7-208ENST00000465309 MAP2K2P36507 400 aa9.26□□□□□ -0.93
LMO7-208ENST00000465309 CIAPIN1Q6FI81 312 aa9.26□□□□□ -0.93
LMO7-208ENST00000465309 COL6A3P12111 3177 aa9.26□□□□□ -0.93
LMO7-208ENST00000465309 GYS1P13807 737 aa9.25□□□□□ -0.93
LMO7-208ENST00000465309 MNX1P50219 401 aaPredicted RBP9.25□□□□□ -0.93
LMO7-208ENST00000465309 FMR1Q06787 632 aaKnown RBP eCLIP9.25□□□□□ -0.93
LMO7-208ENST00000465309 TRAPPC3LQ5T215 181 aa9.25□□□□□ -0.93
LMO7-208ENST00000465309 SMARCC1Q92922 1105 aaPredicted RBP9.25□□□□□ -0.93
LMO7-208ENST00000465309 CABP2Q9NPB3 220 aa9.25□□□□□ -0.93
LMO7-208ENST00000465309 DDX21Q9NR30 783 aaKnown RBP eCLIP9.25□□□□□ -0.93
LMO7-208ENST00000465309 CABP1Q9NZU7 370 aa9.25□□□□□ -0.93
LMO7-208ENST00000465309 COLQQ9Y215 455 aaPredicted RBP9.25□□□□□ -0.93
LMO7-208ENST00000465309 SSUH2Q9Y2M2 353 aa9.25□□□□□ -0.93
LMO7-208ENST00000465309 ITGB4P16144 1822 aa9.25□□□□□ -0.93
LMO7-208ENST00000465309 TRIOBPQ9H2D6 2365 aa9.25□□□□□ -0.93
LMO7-208ENST00000465309 BRPF1P55201 1214 aaPredicted RBP9.24□□□□□ -0.93
LMO7-208ENST00000465309 HOMEZQ8IX15 550 aa9.24□□□□□ -0.93
LMO7-208ENST00000465309 PIP4P2Q8N4L2 257 aa9.24□□□□□ -0.93
LMO7-208ENST00000465309 HPS5Q9UPZ3 1129 aa9.24□□□□□ -0.93
LMO7-208ENST00000465309 MEGF6O75095 1541 aa9.24□□□□□ -0.93
LMO7-208ENST00000465309 ADAMTSL1Q8N6G6 1762 aa9.24□□□□□ -0.93
LMO7-208ENST00000465309 MAP2P11137 1827 aaKnown RBP9.24□□□□□ -0.93
LMO7-208ENST00000465309 TRPM7Q96QT4 1865 aa9.23□□□□□ -0.93
LMO7-208ENST00000465309 FAM208AQ9UK61 1670 aaKnown RBP9.23□□□□□ -0.93
LMO7-208ENST00000465309 RGPD2P0DJD1 1756 aa9.23□□□□□ -0.93
LMO7-208ENST00000465309 LOC102724428A0A0B4J2F2 783 aa9.23□□□□□ -0.93
LMO7-208ENST00000465309 RFC4P35249 363 aa9.23□□□□□ -0.93
LMO7-208ENST00000465309 SIK1P57059 783 aa9.23□□□□□ -0.93
LMO7-208ENST00000465309 RTCBQ9Y3I0 505 aaKnown RBP9.23□□□□□ -0.93
LMO7-208ENST00000465309 TTC21BQ7Z4L5 1316 aa9.23□□□□□ -0.93
LMO7-208ENST00000465309 DLEC1Q9Y238 1755 aa9.22□□□□□ -0.93
LMO7-208ENST00000465309 ATP6V1AP38606 617 aa9.22□□□□□ -0.93
LMO7-208ENST00000465309 ITPK1Q13572 414 aa9.22□□□□□ -0.93
LMO7-208ENST00000465309 TTLL6Q8N841 843 aa9.22□□□□□ -0.93
LMO7-208ENST00000465309 ARHGEF1Q92888 912 aaKnown RBP9.22□□□□□ -0.93
LMO7-208ENST00000465309 HACL1Q9UJ83 578 aa9.22□□□□□ -0.93
LMO7-208ENST00000465309 MKI67P46013 3256 aaKnown RBP9.22□□□□□ -0.93
LMO7-208ENST00000465309 HAX1O00165 279 aa9.21□□□□□ -0.94
LMO7-208ENST00000465309 EPHX2P34913 555 aa9.21□□□□□ -0.94
LMO7-208ENST00000465309 DDR1Q08345 913 aa9.21□□□□□ -0.94
LMO7-208ENST00000465309 ZNF692Q9BU19 519 aaPredicted RBP9.21□□□□□ -0.94
LMO7-208ENST00000465309 TLL2Q9Y6L7 1015 aa9.21□□□□□ -0.94
LMO7-208ENST00000465309 FER1L6Q2WGJ9 1857 aa9.2□□□□□ -0.94
LMO7-208ENST00000465309 CTU1Q7Z7A3 348 aaKnown RBP9.2□□□□□ -0.94
LMO7-208ENST00000465309 L3MBTL3Q96JM7 780 aaPredicted RBP9.2□□□□□ -0.94
LMO7-208ENST00000465309 TRAF5O00463 557 aa9.19□□□□□ -0.94
LMO7-208ENST00000465309 FXR2P51116 673 aaKnown RBP eCLIP9.19□□□□□ -0.94
LMO7-208ENST00000465309 PNMA8AQ86V59 439 aaPredicted RBP9.19□□□□□ -0.94
LMO7-208ENST00000465309 TONSLQ96HA7 1378 aa9.19□□□□□ -0.94
LMO7-208ENST00000465309 C21orf2O43822 256 aa9.18□□□□□ -0.94
LMO7-208ENST00000465309 CST9Q5W186 159 aa9.18□□□□□ -0.94
LMO7-208ENST00000465309 RNF123Q5XPI4 1314 aa9.18□□□□□ -0.94
LMO7-208ENST00000465309 DIEXFQ68CQ4 756 aaKnown RBP9.18□□□□□ -0.94
LMO7-208ENST00000465309 PIGBQ92521 554 aa9.18□□□□□ -0.94
LMO7-208ENST00000465309 COL25A1Q9BXS0 654 aaPredicted RBP9.18□□□□□ -0.94
LMO7-208ENST00000465309 SRP68Q9UHB9 627 aaKnown RBP9.18□□□□□ -0.94
LMO7-208ENST00000465309 SCN11AQ9UI33 1791 aa9.17□□□□□ -0.94
LMO7-208ENST00000465309 TTC21AQ8NDW8 1320 aa9.17□□□□□ -0.94
LMO7-208ENST00000465309 SPDYE4A6NLX3 237 aa9.17□□□□□ -0.94
LMO7-208ENST00000465309 C2CD5Q86YS7 1000 aa9.17□□□□□ -0.94
LMO7-208ENST00000465309 L3MBTL2Q969R5 705 aa9.17□□□□□ -0.94
LMO7-208ENST00000465309 ZIC5Q96T25 663 aa9.17□□□□□ -0.94
LMO7-208ENST00000465309 TAOK3Q9H2K8 898 aa9.17□□□□□ -0.94
LMO7-208ENST00000465309 CACNA1SQ13698 1873 aa9.17□□□□□ -0.94
LMO7-208ENST00000465309 AFDNP55196 1824 aaKnown RBP9.17□□□□□ -0.94
LMO7-208ENST00000465309 ZNF541Q9H0D2 1346 aa9.16□□□□□ -0.94
LMO7-208ENST00000465309 TRPA1O75762 1119 aa9.16□□□□□ -0.94
LMO7-208ENST00000465309 BICDL1Q6ZP65 573 aa9.16□□□□□ -0.94
LMO7-208ENST00000465309 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.16□□□□□ -0.94
LMO7-208ENST00000465309 USHBP1Q8N6Y0 703 aa9.16□□□□□ -0.94
LMO7-208ENST00000465309 TSHZ2Q9NRE2 1034 aa9.16□□□□□ -0.94
LMO7-208ENST00000465309 AKAP11Q9UKA4 1901 aa9.15□□□□□ -0.94
LMO7-208ENST00000465309 PCDH11XQ9BZA7 1347 aa9.15□□□□□ -0.94
LMO7-208ENST00000465309 PCDH11YQ9BZA8 1340 aa9.15□□□□□ -0.94
LMO7-208ENST00000465309 POLRMTO00411 1230 aaKnown RBP9.15□□□□□ -0.94
LMO7-208ENST00000465309 TMEM132AQ24JP5 1023 aa9.15□□□□□ -0.94
LMO7-208ENST00000465309 AKAP4Q5JQC9 854 aa9.15□□□□□ -0.94
LMO7-208ENST00000465309 SAPCD2Q86UD0 394 aa9.15□□□□□ -0.94
LMO7-208ENST00000465309 ASAP1Q9ULH1 1129 aa9.15□□□□□ -0.94
LMO7-208ENST00000465309 CEP290O15078 2479 aa9.15□□□□□ -0.94
LMO7-208ENST00000465309 USP31Q70CQ4 1352 aa9.14□□□□□ -0.95
LMO7-208ENST00000465309 CELF2O95319 508 aaKnown RBP9.14□□□□□ -0.95
LMO7-208ENST00000465309 RAPGEF4Q8WZA2 1011 aa9.14□□□□□ -0.95
LMO7-208ENST00000465309 ZNF622Q969S3 477 aaKnown RBP eCLIP9.14□□□□□ -0.95
LMO7-208ENST00000465309 ZNF408Q9H9D4 720 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms