RNA–Protein interactions for RNA: ENST00000465224.5

CNNM3-203, Transcript of cyclin and CBS domain divalent metal cation transport mediator 3, humanhuman

TSL 1 (best)

Gene CNNM3, Length 2,607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNNM3-203ENST00000465224 CNKSR2Q8WXI2 1034 aa12.1□□□□□ -0.47
CNNM3-203ENST00000465224 CHAMP1Q96JM3 812 aa12.1□□□□□ -0.47
CNNM3-203ENST00000465224 STK31Q9BXU1 1019 aa12.1□□□□□ -0.47
CNNM3-203ENST00000465224 TBX22Q9Y458 520 aa12.1□□□□□ -0.47
CNNM3-203ENST00000465224 SALL3Q9BXA9 1300 aa12.1□□□□□ -0.47
CNNM3-203ENST00000465224 GNAT3A8MTJ3 354 aa12.09□□□□□ -0.47
CNNM3-203ENST00000465224 ZNF500O60304 480 aaPredicted RBP12.09□□□□□ -0.47
CNNM3-203ENST00000465224 MCTP1Q6DN14 999 aa12.09□□□□□ -0.47
CNNM3-203ENST00000465224 PIK3C2AO00443 1686 aa12.09□□□□□ -0.47
CNNM3-203ENST00000465224 USHBP1Q8N6Y0 703 aa12.09□□□□□ -0.47
CNNM3-203ENST00000465224 ZDHHC9Q9Y397 364 aa12.09□□□□□ -0.47
CNNM3-203ENST00000465224 DIP2AQ14689 1571 aa12.09□□□□□ -0.47
CNNM3-203ENST00000465224 REC8O95072 547 aa12.08□□□□□ -0.47
CNNM3-203ENST00000465224 C14orf37Q86TY3 774 aa12.08□□□□□ -0.47
CNNM3-203ENST00000465224 ATP8B2P98198 1209 aa12.08□□□□□ -0.48
CNNM3-203ENST00000465224 CCDC30Q5VVM6 783 aa12.08□□□□□ -0.48
CNNM3-203ENST00000465224 JARID2Q92833 1246 aaPredicted RBP12.08□□□□□ -0.48
CNNM3-203ENST00000465224 LRRFIP2Q9Y608 721 aaKnown RBP12.08□□□□□ -0.48
CNNM3-203ENST00000465224 DDX49Q9Y6V7 483 aaKnown RBP12.08□□□□□ -0.48
CNNM3-203ENST00000465224 ZNF142P52746 1687 aaPredicted RBP12.08□□□□□ -0.48
CNNM3-203ENST00000465224 NASPP49321 788 aaPredicted RBP12.07□□□□□ -0.48
CNNM3-203ENST00000465224 LRRCC1Q9C099 1032 aa12.07□□□□□ -0.48
CNNM3-203ENST00000465224 NWD1Q149M9 1564 aa12.07□□□□□ -0.48
CNNM3-203ENST00000465224 HTATSF1O43719 755 aaKnown RBP12.07□□□□□ -0.48
CNNM3-203ENST00000465224 ST18O60284 1047 aa12.07□□□□□ -0.48
CNNM3-203ENST00000465224 KCNA6P17658 529 aa12.07□□□□□ -0.48
CNNM3-203ENST00000465224 UNC5CLQ8IV45 518 aa12.07□□□□□ -0.48
CNNM3-203ENST00000465224 USP44Q9H0E7 712 aa12.07□□□□□ -0.48
CNNM3-203ENST00000465224 PHAXQ9H814 394 aaKnown RBP12.07□□□□□ -0.48
CNNM3-203ENST00000465224 LMBRD1Q9NUN5 540 aa12.07□□□□□ -0.48
CNNM3-203ENST00000465224 NOL7Q9UMY1 257 aaKnown RBP12.07□□□□□ -0.48
CNNM3-203ENST00000465224 HDAC5Q9UQL6 1122 aa12.07□□□□□ -0.48
CNNM3-203ENST00000465224 GOLGA6L22H0YM25 854 aa12.07□□□□□ -0.48
CNNM3-203ENST00000465224 PTMSP20962 102 aa12.07□□□□□ -0.48
CNNM3-203ENST00000465224 NUCB2P80303 420 aa12.07□□□□□ -0.48
CNNM3-203ENST00000465224 KLHL40Q2TBA0 621 aa12.07□□□□□ -0.48
CNNM3-203ENST00000465224 PALD1Q9ULE6 856 aa12.07□□□□□ -0.48
CNNM3-203ENST00000465224 MX1P20591 662 aa12.06□□□□□ -0.48
CNNM3-203ENST00000465224 TAF7Q15545 349 aaPredicted RBP12.06□□□□□ -0.48
CNNM3-203ENST00000465224 ATP2B3Q16720 1220 aa12.06□□□□□ -0.48
CNNM3-203ENST00000465224 ABTB2Q8N961 1025 aa12.06□□□□□ -0.48
CNNM3-203ENST00000465224 ESYT1Q9BSJ8 1104 aa12.06□□□□□ -0.48
CNNM3-203ENST00000465224 GNAI3P08754 354 aa12.06□□□□□ -0.48
CNNM3-203ENST00000465224 NEK4P51957 841 aa12.06□□□□□ -0.48
CNNM3-203ENST00000465224 RILPL2Q969X0 211 aa12.06□□□□□ -0.48
CNNM3-203ENST00000465224 IBTKQ9P2D0 1353 aaPredicted RBP12.05□□□□□ -0.48
CNNM3-203ENST00000465224 XRN1Q8IZH2 1706 aaKnown RBP12.05□□□□□ -0.48
CNNM3-203ENST00000465224 IRX5P78411 483 aaPredicted RBP12.05□□□□□ -0.48
CNNM3-203ENST00000465224 FOXD4L5Q5VV16 416 aaPredicted RBP12.05□□□□□ -0.48
CNNM3-203ENST00000465224 FOXD4L4Q8WXT5 416 aaPredicted RBP12.05□□□□□ -0.48
CNNM3-203ENST00000465224 MAP3K5Q99683 1374 aa12.05□□□□□ -0.48
CNNM3-203ENST00000465224 LRRC37A3O60309 1634 aa12.05□□□□□ -0.48
CNNM3-203ENST00000465224 CHMLP26374 656 aa12.05□□□□□ -0.48
CNNM3-203ENST00000465224 ANKLE2Q86XL3 938 aa12.05□□□□□ -0.48
CNNM3-203ENST00000465224 ZNF710Q8N1W2 664 aa12.05□□□□□ -0.48
CNNM3-203ENST00000465224 RBM33Q96EV2 1170 aaKnown RBP12.05□□□□□ -0.48
CNNM3-203ENST00000465224 IL25Q9H293 177 aa12.05□□□□□ -0.48
CNNM3-203ENST00000465224 CWC22Q9HCG8 908 aaKnown RBP12.05□□□□□ -0.48
CNNM3-203ENST00000465224 IL1RAPL2Q9NP60 686 aa12.05□□□□□ -0.48
CNNM3-203ENST00000465224 MARF1Q9Y4F3 1742 aaKnown RBP12.04□□□□□ -0.48
CNNM3-203ENST00000465224 TRIM6-TRIM34B2RNG4 842 aa12.04□□□□□ -0.48
CNNM3-203ENST00000465224 IGSF3O75054 1194 aa12.04□□□□□ -0.48
CNNM3-203ENST00000465224 APPP05067 770 aa12.04□□□□□ -0.48
CNNM3-203ENST00000465224 CAVIN1Q6NZI2 390 aaKnown RBP12.04□□□□□ -0.48
CNNM3-203ENST00000465224 SASS6Q6UVJ0 657 aa12.04□□□□□ -0.48
CNNM3-203ENST00000465224 TMX3Q96JJ7 454 aa12.04□□□□□ -0.48
CNNM3-203ENST00000465224 FAM208AQ9UK61 1670 aaKnown RBP12.04□□□□□ -0.48
CNNM3-203ENST00000465224 PRPF40AO75400 957 aaKnown RBP12.04□□□□□ -0.48
CNNM3-203ENST00000465224 MYCNP04198 464 aaPredicted RBP12.04□□□□□ -0.48
CNNM3-203ENST00000465224 HSP90B1P14625 803 aaKnown RBP12.04□□□□□ -0.48
CNNM3-203ENST00000465224 TSC1Q92574 1164 aa12.04□□□□□ -0.48
CNNM3-203ENST00000465224 HDGFL1Q5TGJ6 251 aa12.03□□□□□ -0.48
CNNM3-203ENST00000465224 NOL8Q76FK4 1167 aaKnown RBP12.03□□□□□ -0.48
CNNM3-203ENST00000465224 NUTM1Q86Y26 1132 aa12.03□□□□□ -0.48
CNNM3-203ENST00000465224 GPT2Q8TD30 523 aa12.03□□□□□ -0.48
CNNM3-203ENST00000465224 LGR6Q9HBX8 967 aa12.03□□□□□ -0.48
CNNM3-203ENST00000465224 TUBGCP6Q96RT7 1819 aa12.03□□□□□ -0.48
CNNM3-203ENST00000465224 MAP4K4O95819 1239 aaPredicted RBP12.03□□□□□ -0.48
CNNM3-203ENST00000465224 EIF2S2P20042 333 aaKnown RBP12.03□□□□□ -0.48
CNNM3-203ENST00000465224 HS1BP3Q53T59 392 aa12.03□□□□□ -0.48
CNNM3-203ENST00000465224 ANO2Q9NQ90 1003 aa12.03□□□□□ -0.48
CNNM3-203ENST00000465224 RBM27Q9P2N5 1060 aaKnown RBP12.03□□□□□ -0.48
CNNM3-203ENST00000465224 STAP2Q9UGK3 403 aa12.03□□□□□ -0.48
CNNM3-203ENST00000465224 CLGNO14967 610 aa12.02□□□□□ -0.49
CNNM3-203ENST00000465224 KCNQ3O43525 872 aa12.02□□□□□ -0.49
CNNM3-203ENST00000465224 UBTFL1P0CB47 393 aaPredicted RBP12.02□□□□□ -0.49
CNNM3-203ENST00000465224 NSFL1CQ9UNZ2 370 aaKnown RBP12.02□□□□□ -0.49
CNNM3-203ENST00000465224 ZSCAN23Q3MJ62 389 aa12.02□□□□□ -0.49
CNNM3-203ENST00000465224 PPP1R42Q7Z4L9 355 aa12.02□□□□□ -0.49
CNNM3-203ENST00000465224 MMP14P50281 582 aa12.01□□□□□ -0.49
CNNM3-203ENST00000465224 NBPF6Q5VWK0 638 aa12.01□□□□□ -0.49
CNNM3-203ENST00000465224 SSH3Q8TE77 659 aa12.01□□□□□ -0.49
CNNM3-203ENST00000465224 CHMP4CQ96CF2 233 aa12.01□□□□□ -0.49
CNNM3-203ENST00000465224 NBPF4Q96M43 638 aa12.01□□□□□ -0.49
CNNM3-203ENST00000465224 DNAJC2Q99543 621 aaKnown RBP12.01□□□□□ -0.49
CNNM3-203ENST00000465224 ANXA1P04083 346 aa12.01□□□□□ -0.49
CNNM3-203ENST00000465224 NBPF7P0C2Y1 421 aaPredicted RBP12.01□□□□□ -0.49
CNNM3-203ENST00000465224 KCNJ4P48050 445 aa12□□□□□ -0.49
CNNM3-203ENST00000465224 ZNF445P59923 1031 aa12□□□□□ -0.49
CNNM3-203ENST00000465224 UPF3BQ9BZI7 483 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms