RNA–Protein interactions for RNA: ENST00000465007.1

ATP1A3-203, Transcript of ATPase Na+/K+ transporting subunit alpha 3, humanhuman

TSL 3

Gene ATP1A3, Length 255 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3-203ENST00000465007 SOS1Q07889 1333 aaPredicted RBP20.28■□□□□ 0.84
ATP1A3-203ENST00000465007 NPHP1O15259 732 aa20.28■□□□□ 0.84
ATP1A3-203ENST00000465007 GAS2L2Q8NHY3 880 aa20.28■□□□□ 0.84
ATP1A3-203ENST00000465007 NMRK2Q9NPI5 230 aa20.28■□□□□ 0.84
ATP1A3-203ENST00000465007 CFAP53Q96M91 514 aa20.27■□□□□ 0.84
ATP1A3-203ENST00000465007 ZNF330Q9Y3S2 320 aaPredicted RBP20.27■□□□□ 0.84
ATP1A3-203ENST00000465007 COL15A1P39059 1388 aa20.26■□□□□ 0.83
ATP1A3-203ENST00000465007 GNAT3A8MTJ3 354 aa20.26■□□□□ 0.83
ATP1A3-203ENST00000465007 H0YIN7 160 aa20.26■□□□□ 0.83
ATP1A3-203ENST00000465007 SERPINB2P05120 415 aa20.26■□□□□ 0.83
ATP1A3-203ENST00000465007 NFIXQ14938 502 aa20.26■□□□□ 0.83
ATP1A3-203ENST00000465007 RBM46Q8TBY0 533 aaKnown RBP20.26■□□□□ 0.83
ATP1A3-203ENST00000465007 COL5A3P25940 1745 aaPredicted RBP20.26■□□□□ 0.83
ATP1A3-203ENST00000465007 N4BP2Q86UW6 1770 aaPredicted RBP20.26■□□□□ 0.83
ATP1A3-203ENST00000465007 BICDL1Q6ZP65 573 aa20.25■□□□□ 0.83
ATP1A3-203ENST00000465007 ZBTB1Q9Y2K1 713 aa20.25■□□□□ 0.83
ATP1A3-203ENST00000465007 C2CD5Q86YS7 1000 aa20.24■□□□□ 0.83
ATP1A3-203ENST00000465007 TTLL6Q8N841 843 aa20.24■□□□□ 0.83
ATP1A3-203ENST00000465007 KIF13BQ9NQT8 1826 aa20.24■□□□□ 0.83
ATP1A3-203ENST00000465007 PER1O15534 1290 aaPredicted RBP20.23■□□□□ 0.83
ATP1A3-203ENST00000465007 FSTL1Q12841 308 aa20.23■□□□□ 0.83
ATP1A3-203ENST00000465007 RRAGCQ9HB90 399 aa20.23■□□□□ 0.83
ATP1A3-203ENST00000465007 NUDCQ9Y266 331 aa20.23■□□□□ 0.83
ATP1A3-203ENST00000465007 PDZRN3Q9UPQ7 1066 aa20.22■□□□□ 0.83
ATP1A3-203ENST00000465007 LMNB1P20700 586 aa20.21■□□□□ 0.83
ATP1A3-203ENST00000465007 FMNL2Q96PY5 1086 aa20.21■□□□□ 0.83
ATP1A3-203ENST00000465007 PDE6BP35913 854 aa20.2■□□□□ 0.82
ATP1A3-203ENST00000465007 ZNF790Q6PG37 636 aa20.2■□□□□ 0.82
ATP1A3-203ENST00000465007 ZNF622Q969S3 477 aaKnown RBP eCLIP20.2■□□□□ 0.82
ATP1A3-203ENST00000465007 MYH14Q7Z406 1995 aaKnown RBP20.2■□□□□ 0.82
ATP1A3-203ENST00000465007 RTF1Q92541 710 aaKnown RBP20.19■□□□□ 0.82
ATP1A3-203ENST00000465007 ZC3H4Q9UPT8 1303 aaKnown RBP20.19■□□□□ 0.82
ATP1A3-203ENST00000465007 SCN11AQ9UI33 1791 aa20.18■□□□□ 0.82
ATP1A3-203ENST00000465007 BTBD11A6QL63 1104 aa20.18■□□□□ 0.82
ATP1A3-203ENST00000465007 EIF5P55010 431 aaKnown RBP20.18■□□□□ 0.82
ATP1A3-203ENST00000465007 DPY19L2Q6NUT2 758 aa20.18■□□□□ 0.82
ATP1A3-203ENST00000465007 SMC1BQ8NDV3 1235 aa20.18■□□□□ 0.82
ATP1A3-203ENST00000465007 ZNF496Q96IT1 587 aaPredicted RBP20.18■□□□□ 0.82
ATP1A3-203ENST00000465007 TJP1Q07157 1748 aa20.17■□□□□ 0.82
ATP1A3-203ENST00000465007 IL6STP40189 918 aaPredicted RBP20.17■□□□□ 0.82
ATP1A3-203ENST00000465007 SETDB2Q96T68 719 aa20.17■□□□□ 0.82
ATP1A3-203ENST00000465007 TBC1D2BQ9UPU7 963 aa20.17■□□□□ 0.82
ATP1A3-203ENST00000465007 MRC1P22897 1456 aa20.17■□□□□ 0.82
ATP1A3-203ENST00000465007 VEGFAP15692 232 aaPredicted RBP20.16■□□□□ 0.82
ATP1A3-203ENST00000465007 RASSF7Q02833 373 aa20.16■□□□□ 0.82
ATP1A3-203ENST00000465007 IL17REQ8NFR9 667 aa20.16■□□□□ 0.82
ATP1A3-203ENST00000465007 BRIP1Q9BX63 1249 aa20.16■□□□□ 0.82
ATP1A3-203ENST00000465007 BCL2L12Q9HB09 334 aa20.16■□□□□ 0.82
ATP1A3-203ENST00000465007 NPC1L1Q9UHC9 1359 aa20.16■□□□□ 0.82
ATP1A3-203ENST00000465007 HEG1Q9ULI3 1381 aa20.16■□□□□ 0.82
ATP1A3-203ENST00000465007 KIAA1551Q9HCM1 1747 aa20.16■□□□□ 0.82
ATP1A3-203ENST00000465007 CEP350Q5VT06 3117 aa20.15■□□□□ 0.82
ATP1A3-203ENST00000465007 NEFMP07197 916 aa20.15■□□□□ 0.82
ATP1A3-203ENST00000465007 ST5P78524 1137 aa20.15■□□□□ 0.82
ATP1A3-203ENST00000465007 KCPQ6ZWJ8 1503 aa20.15■□□□□ 0.82
ATP1A3-203ENST00000465007 PRKAR2BP31323 418 aa20.14■□□□□ 0.81
ATP1A3-203ENST00000465007 TBC1D9BQ66K14 1250 aa20.14■□□□□ 0.81
ATP1A3-203ENST00000465007 GLTPD2A6NH11 291 aa20.13■□□□□ 0.81
ATP1A3-203ENST00000465007 U2AF1L5P0DN76 240 aaPredicted RBP20.13■□□□□ 0.81
ATP1A3-203ENST00000465007 U2AF1Q01081 240 aaKnown RBP eCLIP20.13■□□□□ 0.81
ATP1A3-203ENST00000465007 CNBD1Q8NA66 436 aa20.13■□□□□ 0.81
ATP1A3-203ENST00000465007 ZNF219Q9P2Y4 722 aaPredicted RBP20.13■□□□□ 0.81
ATP1A3-203ENST00000465007 CARMIL3Q8ND23 1372 aa20.12■□□□□ 0.81
ATP1A3-203ENST00000465007 DNAJC5GQ8N7S2 189 aa20.12■□□□□ 0.81
ATP1A3-203ENST00000465007 CNKSR1Q969H4 720 aa20.12■□□□□ 0.81
ATP1A3-203ENST00000465007 ZNF652Q9Y2D9 606 aa20.12■□□□□ 0.81
ATP1A3-203ENST00000465007 SOGA3Q5TF21 947 aa20.11■□□□□ 0.81
ATP1A3-203ENST00000465007 DZIP3Q86Y13 1208 aaKnown RBP20.11■□□□□ 0.81
ATP1A3-203ENST00000465007 ARFGEF1Q9Y6D6 1849 aa20.11■□□□□ 0.81
ATP1A3-203ENST00000465007 C21orf2O43822 256 aa20.1■□□□□ 0.81
ATP1A3-203ENST00000465007 A1BGP04217 495 aa20.1■□□□□ 0.81
ATP1A3-203ENST00000465007 ERFEQ4G0M1 354 aa20.1■□□□□ 0.81
ATP1A3-203ENST00000465007 KLRG1Q96E93 195 aa20.1■□□□□ 0.81
ATP1A3-203ENST00000465007 SNRPA1P09661 255 aaKnown RBP20.09■□□□□ 0.81
ATP1A3-203ENST00000465007 PRR5LQ6MZQ0 368 aa20.09■□□□□ 0.81
ATP1A3-203ENST00000465007 NBPF5PQ86XG9 351 aaPredicted RBP20.09■□□□□ 0.81
ATP1A3-203ENST00000465007 CCDC24Q8N4L8 307 aa20.08■□□□□ 0.81
ATP1A3-203ENST00000465007 PHACTR3Q96KR7 559 aa20.08■□□□□ 0.81
ATP1A3-203ENST00000465007 BRCA1P38398 1863 aaKnown RBP20.07■□□□□ 0.8
ATP1A3-203ENST00000465007 RSPH6AQ9H0K4 717 aa20.07■□□□□ 0.8
ATP1A3-203ENST00000465007 TAOK3Q9H2K8 898 aa20.07■□□□□ 0.8
ATP1A3-203ENST00000465007 GTF2E1P29083 439 aaPredicted RBP20.06■□□□□ 0.8
ATP1A3-203ENST00000465007 HTRA3P83110 453 aa20.06■□□□□ 0.8
ATP1A3-203ENST00000465007 STYK1Q6J9G0 422 aa20.06■□□□□ 0.8
ATP1A3-203ENST00000465007 CLEC4GQ6UXB4 293 aa20.06■□□□□ 0.8
ATP1A3-203ENST00000465007 MASTLQ96GX5 879 aa20.06■□□□□ 0.8
ATP1A3-203ENST00000465007 TPTE2Q6XPS3 522 aa20.05■□□□□ 0.8
ATP1A3-203ENST00000465007 NFKBIEO00221 500 aa20.04■□□□□ 0.8
ATP1A3-203ENST00000465007 KCNQ3O43525 872 aa20.04■□□□□ 0.8
ATP1A3-203ENST00000465007 HTATSF1O43719 755 aaKnown RBP20.04■□□□□ 0.8
ATP1A3-203ENST00000465007 CAMTA2O94983 1202 aa20.04■□□□□ 0.8
ATP1A3-203ENST00000465007 MCM10Q7L590 875 aa20.04■□□□□ 0.8
ATP1A3-203ENST00000465007 USP16Q9Y5T5 823 aa20.04■□□□□ 0.8
ATP1A3-203ENST00000465007 CEMIPQ8WUJ3 1361 aa20.04■□□□□ 0.8
ATP1A3-203ENST00000465007 ADAMTS7Q9UKP4 1686 aa20.03■□□□□ 0.8
ATP1A3-203ENST00000465007 SRGNP10124 158 aa20.02■□□□□ 0.8
ATP1A3-203ENST00000465007 PPP2R1AP30153 589 aa20.02■□□□□ 0.8
ATP1A3-203ENST00000465007 PRPF40BQ6NWY9 871 aaKnown RBP20.02■□□□□ 0.8
ATP1A3-203ENST00000465007 COL3A1P02461 1466 aaPredicted RBP20.02■□□□□ 0.8
ATP1A3-203ENST00000465007 PIP4K2AP48426 406 aaPredicted RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms