RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 ZPR1O75312 459 aa34.44■■■■□ 3.1
U2AF1-206ENST00000464750 STARD3NLO95772 234 aa34.43■■■■□ 3.1
U2AF1-206ENST00000464750 USPL1Q5W0Q7 1092 aa34.43■■■■□ 3.1
U2AF1-206ENST00000464750 MCM10Q7L590 875 aa34.43■■■■□ 3.1
U2AF1-206ENST00000464750 BTBD11A6QL63 1104 aa34.42■■■■□ 3.1
U2AF1-206ENST00000464750 DDR1Q08345 913 aa34.42■■■■□ 3.1
U2AF1-206ENST00000464750 FMNL2Q96PY5 1086 aa34.42■■■■□ 3.1
U2AF1-206ENST00000464750 CANXP27824 592 aaKnown RBP34.41■■■■□ 3.1
U2AF1-206ENST00000464750 TGFB2P61812 414 aa34.41■■■■□ 3.1
U2AF1-206ENST00000464750 BRCA1P38398 1863 aaKnown RBP34.41■■■■□ 3.1
U2AF1-206ENST00000464750 DDX10Q13206 875 aaKnown RBP34.4■■■■□ 3.1
U2AF1-206ENST00000464750 NARFQ9UHQ1 456 aa34.4■■■■□ 3.1
U2AF1-206ENST00000464750 KCNQ3O43525 872 aa34.39■■■■□ 3.1
U2AF1-206ENST00000464750 NEFMP07197 916 aa34.38■■■■□ 3.09
U2AF1-206ENST00000464750 DCTN1Q14203 1278 aa34.38■■■■□ 3.09
U2AF1-206ENST00000464750 RALBP1Q15311 655 aa34.38■■■■□ 3.09
U2AF1-206ENST00000464750 TEX13AQ9BXU3 409 aaPredicted RBP34.38■■■■□ 3.09
U2AF1-206ENST00000464750 AFDNP55196 1824 aaKnown RBP34.37■■■■□ 3.09
U2AF1-206ENST00000464750 HTATSF1O43719 755 aaKnown RBP34.37■■■■□ 3.09
U2AF1-206ENST00000464750 SCN7AQ01118 1682 aa34.37■■■■□ 3.09
U2AF1-206ENST00000464750 A0A0G2JLW4 131 aa34.36■■■■□ 3.09
U2AF1-206ENST00000464750 POLRMTO00411 1230 aaKnown RBP34.35■■■■□ 3.09
U2AF1-206ENST00000464750 TM4SF1P30408 202 aa34.35■■■■□ 3.09
U2AF1-206ENST00000464750 EIF5P55010 431 aaKnown RBP34.34■■■■□ 3.09
U2AF1-206ENST00000464750 NRXN2Q9P2S2 1712 aa34.33■■■■□ 3.09
U2AF1-206ENST00000464750 DPEP1P16444 411 aa34.33■■■■□ 3.09
U2AF1-206ENST00000464750 PLEKHF1Q96S99 279 aa34.33■■■■□ 3.09
U2AF1-206ENST00000464750 BCL2L12Q9HB09 334 aa34.32■■■■□ 3.08
U2AF1-206ENST00000464750 A0A087WZG4 1122 aa34.31■■■■□ 3.08
U2AF1-206ENST00000464750 NFIXQ14938 502 aa34.31■■■■□ 3.08
U2AF1-206ENST00000464750 BCS1LQ9Y276 419 aa34.3■■■■□ 3.08
U2AF1-206ENST00000464750 ZNF330Q9Y3S2 320 aaPredicted RBP34.3■■■■□ 3.08
U2AF1-206ENST00000464750 ARFGEF1Q9Y6D6 1849 aa34.29■■■■□ 3.08
U2AF1-206ENST00000464750 MAPK8IP3Q9UPT6 1336 aa34.29■■■■□ 3.08
U2AF1-206ENST00000464750 KDM3BQ7LBC6 1761 aa34.28■■■■□ 3.08
U2AF1-206ENST00000464750 A1BGP04217 495 aa34.28■■■■□ 3.08
U2AF1-206ENST00000464750 IL6STP40189 918 aaPredicted RBP34.28■■■■□ 3.08
U2AF1-206ENST00000464750 BCORQ6W2J9 1755 aa34.27■■■■□ 3.08
U2AF1-206ENST00000464750 NFE2L2Q16236 605 aa34.27■■■■□ 3.08
U2AF1-206ENST00000464750 PNNQ9H307 717 aaKnown RBP34.27■■■■□ 3.08
U2AF1-206ENST00000464750 MYBBP1AQ9BQG0 1328 aaKnown RBP34.27■■■■□ 3.08
U2AF1-206ENST00000464750 LAMB4A4D0S4 1761 aa34.26■■■■□ 3.08
U2AF1-206ENST00000464750 ATP10DQ9P241 1426 aa34.26■■■■□ 3.07
U2AF1-206ENST00000464750 ADCY9O60503 1353 aa34.25■■■■□ 3.07
U2AF1-206ENST00000464750 PRAMEF22A3QJZ6 481 aa34.25■■■■□ 3.07
U2AF1-206ENST00000464750 TAF7Q15545 349 aaPredicted RBP34.25■■■■□ 3.07
U2AF1-206ENST00000464750 USP16Q9Y5T5 823 aa34.25■■■■□ 3.07
U2AF1-206ENST00000464750 SNRPA1P09661 255 aaKnown RBP34.24■■■■□ 3.07
U2AF1-206ENST00000464750 KCNA3P22001 575 aa34.24■■■■□ 3.07
U2AF1-206ENST00000464750 TBC1D2BQ9UPU7 963 aa34.23■■■■□ 3.07
U2AF1-206ENST00000464750 SERPINB2P05120 415 aa34.22■■■■□ 3.07
U2AF1-206ENST00000464750 NPM2Q86SE8 214 aaKnown RBP34.22■■■■□ 3.07
U2AF1-206ENST00000464750 CHRNA5P30532 468 aa34.21■■■■□ 3.07
U2AF1-206ENST00000464750 BICDL1Q6ZP65 573 aa34.21■■■■□ 3.07
U2AF1-206ENST00000464750 PIM2Q9P1W9 311 aa34.21■■■■□ 3.07
U2AF1-206ENST00000464750 DLEC1Q9Y238 1755 aa34.21■■■■□ 3.07
U2AF1-206ENST00000464750 PIP4K2AP48426 406 aaPredicted RBP34.2■■■■□ 3.07
U2AF1-206ENST00000464750 MIS18AQ9NYP9 233 aa34.2■■■■□ 3.07
U2AF1-206ENST00000464750 THUMPD2Q9BTF0 503 aaKnown RBP34.19■■■■□ 3.06
U2AF1-206ENST00000464750 TBC1D9BQ66K14 1250 aa34.18■■■■□ 3.06
U2AF1-206ENST00000464750 PNISRQ8TF01 805 aaKnown RBP34.18■■■■□ 3.06
U2AF1-206ENST00000464750 CARMIL3Q8ND23 1372 aa34.17■■■■□ 3.06
U2AF1-206ENST00000464750 GIGYF1O75420 1035 aaPredicted RBP34.16■■■■□ 3.06
U2AF1-206ENST00000464750 CAMTA2O94983 1202 aa34.16■■■■□ 3.06
U2AF1-206ENST00000464750 DZIP3Q86Y13 1208 aaKnown RBP34.16■■■■□ 3.06
U2AF1-206ENST00000464750 ANKRD31Q8N7Z5 1873 aa34.16■■■■□ 3.06
U2AF1-206ENST00000464750 DALRD3Q5D0E6 543 aaKnown RBP34.15■■■■□ 3.06
U2AF1-206ENST00000464750 ARHGAP27Q6ZUM4 889 aa34.15■■■■□ 3.06
U2AF1-206ENST00000464750 NBPF26B4DH59 902 aa34.1■■■■□ 3.05
U2AF1-206ENST00000464750 C1QTNF8P60827 252 aa34.1■■■■□ 3.05
U2AF1-206ENST00000464750 NBPF10Q6P3W6 841 aaKnown RBP34.1■■■■□ 3.05
U2AF1-206ENST00000464750 NBPF15Q8N660 670 aa34.1■■■■□ 3.05
U2AF1-206ENST00000464750 ZNF526Q8TF50 670 aaPredicted RBP34.1■■■■□ 3.05
U2AF1-206ENST00000464750 RIPK4P57078 832 aa34.09■■■■□ 3.05
U2AF1-206ENST00000464750 GPBP1L1Q9HC44 474 aaPredicted RBP34.09■■■■□ 3.05
U2AF1-206ENST00000464750 COL11A2P13942 1736 aaPredicted RBP34.08■■■■□ 3.05
U2AF1-206ENST00000464750 EIF4A1P60842 406 aaKnown RBP34.08■■■■□ 3.05
U2AF1-206ENST00000464750 SETDB2Q96T68 719 aa34.07■■■■□ 3.04
U2AF1-206ENST00000464750 PRKRIP1Q9H875 184 aaPredicted RBP34.07■■■■□ 3.04
U2AF1-206ENST00000464750 TMPOP42166 694 aaKnown RBP34.06■■■■□ 3.04
U2AF1-206ENST00000464750 WDR43Q15061 677 aaKnown RBP eCLIP34.06■■■■□ 3.04
U2AF1-206ENST00000464750 PRR5LQ6MZQ0 368 aa34.06■■■■□ 3.04
U2AF1-206ENST00000464750 C2CD5Q86YS7 1000 aa34.06■■■■□ 3.04
U2AF1-206ENST00000464750 CCDC146Q8IYE0 955 aa34.06■■■■□ 3.04
U2AF1-206ENST00000464750 LMOD3Q0VAK6 560 aa34.04■■■■□ 3.04
U2AF1-206ENST00000464750 ZNF652Q9Y2D9 606 aa34.04■■■■□ 3.04
U2AF1-206ENST00000464750 H0YIN7 160 aa34.03■■■■□ 3.04
U2AF1-206ENST00000464750 CCDC24Q8N4L8 307 aa34.03■■■■□ 3.04
U2AF1-206ENST00000464750 CNBD1Q8NA66 436 aa34.03■■■■□ 3.04
U2AF1-206ENST00000464750 CLEC4GQ6UXB4 293 aa34.02■■■■□ 3.04
U2AF1-206ENST00000464750 TSPYL4Q9UJ04 414 aa34.02■■■■□ 3.04
U2AF1-206ENST00000464750 RRP7AQ9Y3A4 280 aaKnown RBP34.02■■■■□ 3.04
U2AF1-206ENST00000464750 SBF1O95248 1867 aa34.01■■■■□ 3.04
U2AF1-206ENST00000464750 NPHP1O15259 732 aa34.01■■■■□ 3.03
U2AF1-206ENST00000464750 BRIP1Q9BX63 1249 aa34.01■■■■□ 3.03
U2AF1-206ENST00000464750 ZEB1P37275 1124 aaPredicted RBP34■■■■□ 3.03
U2AF1-206ENST00000464750 PDE6BP35913 854 aa33.99■■■■□ 3.03
U2AF1-206ENST00000464750 TTLL6Q8N841 843 aa33.99■■■■□ 3.03
U2AF1-206ENST00000464750 RUNDC1Q96C34 613 aa33.99■■■■□ 3.03
U2AF1-206ENST00000464750 ST5P78524 1137 aa33.98■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms