RNA–Protein interactions for RNA: ENST00000464673.1

LINC01998-201, Transcript of long intergenic non-protein coding RNA 1998, humanhuman

TSL 1 (best) BASIC

Gene LINC01998, Length 1,967 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01998-201ENST00000464673 DDX19BQ9UMR2 479 aa12.39□□□□□ -0.43
LINC01998-201ENST00000464673 ATF7IPQ6VMQ6 1270 aa12.38□□□□□ -0.43
LINC01998-201ENST00000464673 ASAP1Q9ULH1 1129 aa12.38□□□□□ -0.43
LINC01998-201ENST00000464673 TRIM27P14373 513 aa12.38□□□□□ -0.43
LINC01998-201ENST00000464673 KRT24Q2M2I5 525 aa12.38□□□□□ -0.43
LINC01998-201ENST00000464673 TTC5Q8N0Z6 440 aa12.38□□□□□ -0.43
LINC01998-201ENST00000464673 SSH1Q8WYL5 1049 aa12.38□□□□□ -0.43
LINC01998-201ENST00000464673 BCL2L13Q9BXK5 485 aa12.38□□□□□ -0.43
LINC01998-201ENST00000464673 SMC4Q9NTJ3 1288 aa12.38□□□□□ -0.43
LINC01998-201ENST00000464673 KDM3BQ7LBC6 1761 aa12.37□□□□□ -0.43
LINC01998-201ENST00000464673 SBF2Q86WG5 1849 aa12.37□□□□□ -0.43
LINC01998-201ENST00000464673 ELL2O00472 640 aaPredicted RBP12.37□□□□□ -0.43
LINC01998-201ENST00000464673 EIF4A1P60842 406 aaKnown RBP12.37□□□□□ -0.43
LINC01998-201ENST00000464673 FTSJ3Q8IY81 847 aaKnown RBP12.37□□□□□ -0.43
LINC01998-201ENST00000464673 C8orf58Q8NAV2 365 aa12.37□□□□□ -0.43
LINC01998-201ENST00000464673 ATG3Q9NT62 314 aa12.37□□□□□ -0.43
LINC01998-201ENST00000464673 TRIM37O94972 964 aa12.36□□□□□ -0.43
LINC01998-201ENST00000464673 ZNF496Q96IT1 587 aaPredicted RBP12.36□□□□□ -0.43
LINC01998-201ENST00000464673 PTCD1O75127 700 aaKnown RBP12.36□□□□□ -0.43
LINC01998-201ENST00000464673 BECN1Q14457 450 aa12.36□□□□□ -0.43
LINC01998-201ENST00000464673 SMC5Q8IY18 1101 aa12.36□□□□□ -0.43
LINC01998-201ENST00000464673 TSPYL6Q8N831 410 aa12.36□□□□□ -0.43
LINC01998-201ENST00000464673 TBC1D32Q96NH3 1257 aa12.36□□□□□ -0.43
LINC01998-201ENST00000464673 BCL11BQ9C0K0 894 aaPredicted RBP12.36□□□□□ -0.43
LINC01998-201ENST00000464673 NHSQ6T4R5 1651 aa12.35□□□□□ -0.43
LINC01998-201ENST00000464673 IPO8O15397 1037 aaKnown RBP12.35□□□□□ -0.43
LINC01998-201ENST00000464673 SEC24BO95487 1268 aa12.35□□□□□ -0.43
LINC01998-201ENST00000464673 SLC4A3P48751 1232 aa12.35□□□□□ -0.43
LINC01998-201ENST00000464673 TWISTNBQ3B726 338 aaPredicted RBP12.34□□□□□ -0.43
LINC01998-201ENST00000464673 FMNL2Q96PY5 1086 aa12.34□□□□□ -0.43
LINC01998-201ENST00000464673 HEG1Q9ULI3 1381 aa12.34□□□□□ -0.43
LINC01998-201ENST00000464673 GIGYF1O75420 1035 aaPredicted RBP12.34□□□□□ -0.43
LINC01998-201ENST00000464673 UPF2Q9HAU5 1272 aaKnown RBP12.34□□□□□ -0.43
LINC01998-201ENST00000464673 ZBTB40Q9NUA8 1239 aa12.34□□□□□ -0.43
LINC01998-201ENST00000464673 PAPPAQ13219 1627 aa12.33□□□□□ -0.43
LINC01998-201ENST00000464673 BTAF1O14981 1849 aa12.33□□□□□ -0.44
LINC01998-201ENST00000464673 VAMP4O75379 141 aa12.33□□□□□ -0.44
LINC01998-201ENST00000464673 ARHGAP45Q92619 1136 aa12.33□□□□□ -0.44
LINC01998-201ENST00000464673 UBR2Q8IWV8 1755 aa12.33□□□□□ -0.44
LINC01998-201ENST00000464673 PRAMEF22A3QJZ6 481 aa12.32□□□□□ -0.44
LINC01998-201ENST00000464673 SMARCC1Q92922 1105 aaPredicted RBP12.32□□□□□ -0.44
LINC01998-201ENST00000464673 RBM42Q9BTD8 480 aaKnown RBP12.32□□□□□ -0.44
LINC01998-201ENST00000464673 NOB1Q9ULX3 412 aaKnown RBP12.32□□□□□ -0.44
LINC01998-201ENST00000464673 KCPQ6ZWJ8 1503 aa12.32□□□□□ -0.44
LINC01998-201ENST00000464673 PALLDQ8WX93 1383 aa12.32□□□□□ -0.44
LINC01998-201ENST00000464673 SNRPA1P09661 255 aaKnown RBP12.32□□□□□ -0.44
LINC01998-201ENST00000464673 GSE1Q14687 1217 aa12.32□□□□□ -0.44
LINC01998-201ENST00000464673 TMEM57Q8N5G2 664 aa12.31□□□□□ -0.44
LINC01998-201ENST00000464673 SLC4A9Q96Q91 983 aa12.31□□□□□ -0.44
LINC01998-201ENST00000464673 CHMP4BQ9H444 224 aaKnown RBP12.31□□□□□ -0.44
LINC01998-201ENST00000464673 LOC102724428A0A0B4J2F2 783 aa12.3□□□□□ -0.44
LINC01998-201ENST00000464673 HOXB7P09629 217 aa12.3□□□□□ -0.44
LINC01998-201ENST00000464673 SIK1P57059 783 aa12.3□□□□□ -0.44
LINC01998-201ENST00000464673 VSIG10Q8N0Z9 540 aa12.3□□□□□ -0.44
LINC01998-201ENST00000464673 SOS1Q07889 1333 aaPredicted RBP12.3□□□□□ -0.44
LINC01998-201ENST00000464673 EIF2S2P20042 333 aaKnown RBP12.3□□□□□ -0.44
LINC01998-201ENST00000464673 ITPRIPQ8IWB1 547 aa12.3□□□□□ -0.44
LINC01998-201ENST00000464673 USP16Q9Y5T5 823 aa12.3□□□□□ -0.44
LINC01998-201ENST00000464673 APBA3O96018 575 aa12.29□□□□□ -0.44
LINC01998-201ENST00000464673 ATP6V1AP38606 617 aa12.29□□□□□ -0.44
LINC01998-201ENST00000464673 NECTIN2Q92692 538 aa12.29□□□□□ -0.44
LINC01998-201ENST00000464673 ANTXR1Q9H6X2 564 aa12.29□□□□□ -0.44
LINC01998-201ENST00000464673 HDGFL1Q5TGJ6 251 aa12.29□□□□□ -0.44
LINC01998-201ENST00000464673 DNAJC10Q8IXB1 793 aa12.29□□□□□ -0.44
LINC01998-201ENST00000464673 KCNQ4P56696 695 aa12.28□□□□□ -0.44
LINC01998-201ENST00000464673 NUCB1Q02818 461 aa12.28□□□□□ -0.44
LINC01998-201ENST00000464673 MRPL50Q8N5N7 158 aaKnown RBP12.28□□□□□ -0.44
LINC01998-201ENST00000464673 TEX13AQ9BXU3 409 aaPredicted RBP12.28□□□□□ -0.44
LINC01998-201ENST00000464673 C5P01031 1676 aa12.28□□□□□ -0.44
LINC01998-201ENST00000464673 ABCC4O15439 1325 aa12.28□□□□□ -0.44
LINC01998-201ENST00000464673 PLSCR1O15162 318 aa12.27□□□□□ -0.44
LINC01998-201ENST00000464673 ITPK1Q13572 414 aa12.27□□□□□ -0.44
LINC01998-201ENST00000464673 CCDC30Q5VVM6 783 aa12.27□□□□□ -0.44
LINC01998-201ENST00000464673 STARD3NLO95772 234 aa12.27□□□□□ -0.45
LINC01998-201ENST00000464673 CHMP4AQ9BY43 222 aa12.27□□□□□ -0.45
LINC01998-201ENST00000464673 CCNL1Q9UK58 526 aaPredicted RBP12.27□□□□□ -0.45
LINC01998-201ENST00000464673 FRAT2O75474 233 aaPredicted RBP12.26□□□□□ -0.45
LINC01998-201ENST00000464673 SLC4A2P04920 1241 aa12.26□□□□□ -0.45
LINC01998-201ENST00000464673 CHPF2Q9P2E5 772 aa12.26□□□□□ -0.45
LINC01998-201ENST00000464673 LY75O60449 1722 aa12.26□□□□□ -0.45
LINC01998-201ENST00000464673 TNS1Q9HBL0 1735 aaKnown RBP12.25□□□□□ -0.45
LINC01998-201ENST00000464673 A1BGP04217 495 aa12.25□□□□□ -0.45
LINC01998-201ENST00000464673 CYP19A1P11511 503 aaPredicted RBP12.25□□□□□ -0.45
LINC01998-201ENST00000464673 PROM2Q8N271 834 aa12.25□□□□□ -0.45
LINC01998-201ENST00000464673 STK31Q9BXU1 1019 aa12.25□□□□□ -0.45
LINC01998-201ENST00000464673 TBC1D2Q9BYX2 928 aa12.25□□□□□ -0.45
LINC01998-201ENST00000464673 LRRC4BQ9NT99 713 aa12.25□□□□□ -0.45
LINC01998-201ENST00000464673 ZBTB7BO15156 539 aaPredicted RBP12.25□□□□□ -0.45
LINC01998-201ENST00000464673 SF3B2Q13435 895 aaKnown RBP12.25□□□□□ -0.45
LINC01998-201ENST00000464673 GCC1Q96CN9 775 aa12.25□□□□□ -0.45
LINC01998-201ENST00000464673 DBF4Q9UBU7 674 aaPredicted RBP12.25□□□□□ -0.45
LINC01998-201ENST00000464673 TJP1Q07157 1748 aa12.24□□□□□ -0.45
LINC01998-201ENST00000464673 ZNF831Q5JPB2 1677 aa12.24□□□□□ -0.45
LINC01998-201ENST00000464673 ANXA1P04083 346 aa12.24□□□□□ -0.45
LINC01998-201ENST00000464673 PIP4K2AP48426 406 aaPredicted RBP12.24□□□□□ -0.45
LINC01998-201ENST00000464673 PDIA6Q15084 440 aa12.24□□□□□ -0.45
LINC01998-201ENST00000464673 TXNRD1Q16881 649 aa12.24□□□□□ -0.45
LINC01998-201ENST00000464673 SLC27A3Q5K4L6 730 aa12.24□□□□□ -0.45
LINC01998-201ENST00000464673 C22orf23Q9BZE7 217 aa12.24□□□□□ -0.45
LINC01998-201ENST00000464673 NBPF26B4DH59 902 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms