RNA–Protein interactions for RNA: ENST00000464576.1

PTPN18-209, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 5

Gene PTPN18, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-209ENST00000464576 A0A087WZG4 1122 aa12.69□□□□□ -0.38
PTPN18-209ENST00000464576 KCNA3P22001 575 aa12.69□□□□□ -0.38
PTPN18-209ENST00000464576 CANXP27824 592 aaKnown RBP12.69□□□□□ -0.38
PTPN18-209ENST00000464576 CHRNA5P30532 468 aa12.69□□□□□ -0.38
PTPN18-209ENST00000464576 VSIG10Q8N0Z9 540 aa12.69□□□□□ -0.38
PTPN18-209ENST00000464576 RNF181Q9P0P0 153 aa12.69□□□□□ -0.38
PTPN18-209ENST00000464576 NARFQ9UHQ1 456 aa12.69□□□□□ -0.38
PTPN18-209ENST00000464576 ZNF330Q9Y3S2 320 aaPredicted RBP12.69□□□□□ -0.38
PTPN18-209ENST00000464576 COL15A1P39059 1388 aa12.69□□□□□ -0.38
PTPN18-209ENST00000464576 SOS1Q07889 1333 aaPredicted RBP12.68□□□□□ -0.38
PTPN18-209ENST00000464576 GNAT3A8MTJ3 354 aa12.68□□□□□ -0.38
PTPN18-209ENST00000464576 POLRMTO00411 1230 aaKnown RBP12.68□□□□□ -0.38
PTPN18-209ENST00000464576 NPHP1O15259 732 aa12.68□□□□□ -0.38
PTPN18-209ENST00000464576 TM4SF1P30408 202 aa12.68□□□□□ -0.38
PTPN18-209ENST00000464576 GAS2L2Q8NHY3 880 aa12.68□□□□□ -0.38
PTPN18-209ENST00000464576 CFAP53Q96M91 514 aa12.68□□□□□ -0.38
PTPN18-209ENST00000464576 TEX13AQ9BXU3 409 aaPredicted RBP12.68□□□□□ -0.38
PTPN18-209ENST00000464576 H0YIN7 160 aa12.67□□□□□ -0.38
PTPN18-209ENST00000464576 SERPINB2P05120 415 aa12.67□□□□□ -0.38
PTPN18-209ENST00000464576 BICDL1Q6ZP65 573 aa12.67□□□□□ -0.38
PTPN18-209ENST00000464576 NMRK2Q9NPI5 230 aa12.67□□□□□ -0.38
PTPN18-209ENST00000464576 ZBTB1Q9Y2K1 713 aa12.67□□□□□ -0.38
PTPN18-209ENST00000464576 PER1O15534 1290 aaPredicted RBP12.66□□□□□ -0.38
PTPN18-209ENST00000464576 NFIXQ14938 502 aa12.66□□□□□ -0.38
PTPN18-209ENST00000464576 NUDCQ9Y266 331 aa12.66□□□□□ -0.38
PTPN18-209ENST00000464576 AFDNP55196 1824 aaKnown RBP12.66□□□□□ -0.38
PTPN18-209ENST00000464576 MRC1P22897 1456 aa12.65□□□□□ -0.38
PTPN18-209ENST00000464576 IFFO2Q5TF58 517 aa12.65□□□□□ -0.38
PTPN18-209ENST00000464576 C2CD5Q86YS7 1000 aa12.65□□□□□ -0.38
PTPN18-209ENST00000464576 TTLL6Q8N841 843 aa12.65□□□□□ -0.38
PTPN18-209ENST00000464576 KCPQ6ZWJ8 1503 aa12.64□□□□□ -0.39
PTPN18-209ENST00000464576 SBF1O95248 1867 aa12.64□□□□□ -0.39
PTPN18-209ENST00000464576 ZNF790Q6PG37 636 aa12.64□□□□□ -0.39
PTPN18-209ENST00000464576 RBM46Q8TBY0 533 aaKnown RBP12.64□□□□□ -0.39
PTPN18-209ENST00000464576 FMNL2Q96PY5 1086 aa12.64□□□□□ -0.39
PTPN18-209ENST00000464576 RRAGCQ9HB90 399 aa12.64□□□□□ -0.39
PTPN18-209ENST00000464576 LMNB1P20700 586 aa12.63□□□□□ -0.39
PTPN18-209ENST00000464576 PDE6BP35913 854 aa12.63□□□□□ -0.39
PTPN18-209ENST00000464576 RTF1Q92541 710 aaKnown RBP12.63□□□□□ -0.39
PTPN18-209ENST00000464576 ZNF622Q969S3 477 aaKnown RBP eCLIP12.63□□□□□ -0.39
PTPN18-209ENST00000464576 ZNF496Q96IT1 587 aaPredicted RBP12.63□□□□□ -0.39
PTPN18-209ENST00000464576 UBR2Q8IWV8 1755 aa12.63□□□□□ -0.39
PTPN18-209ENST00000464576 CCDC88AQ3V6T2 1871 aa12.62□□□□□ -0.39
PTPN18-209ENST00000464576 ADAMTS7Q9UKP4 1686 aa12.62□□□□□ -0.39
PTPN18-209ENST00000464576 NPC1L1Q9UHC9 1359 aa12.62□□□□□ -0.39
PTPN18-209ENST00000464576 HEG1Q9ULI3 1381 aa12.62□□□□□ -0.39
PTPN18-209ENST00000464576 BTBD11A6QL63 1104 aa12.62□□□□□ -0.39
PTPN18-209ENST00000464576 FSTL1Q12841 308 aa12.62□□□□□ -0.39
PTPN18-209ENST00000464576 SETDB2Q96T68 719 aa12.62□□□□□ -0.39
PTPN18-209ENST00000464576 PDZRN3Q9UPQ7 1066 aa12.62□□□□□ -0.39
PTPN18-209ENST00000464576 TBC1D2BQ9UPU7 963 aa12.62□□□□□ -0.39
PTPN18-209ENST00000464576 NEFMP07197 916 aa12.61□□□□□ -0.39
PTPN18-209ENST00000464576 EIF5P55010 431 aaKnown RBP12.61□□□□□ -0.39
PTPN18-209ENST00000464576 IL17REQ8NFR9 667 aa12.61□□□□□ -0.39
PTPN18-209ENST00000464576 ZC3H4Q9UPT8 1303 aaKnown RBP12.61□□□□□ -0.39
PTPN18-209ENST00000464576 TNRC6CQ9HCJ0 1690 aaKnown RBP12.61□□□□□ -0.39
PTPN18-209ENST00000464576 U2AF1L5P0DN76 240 aaPredicted RBP12.6□□□□□ -0.39
PTPN18-209ENST00000464576 PRKAR2BP31323 418 aa12.6□□□□□ -0.39
PTPN18-209ENST00000464576 IL6STP40189 918 aaPredicted RBP12.6□□□□□ -0.39
PTPN18-209ENST00000464576 ST5P78524 1137 aa12.6□□□□□ -0.39
PTPN18-209ENST00000464576 U2AF1Q01081 240 aaKnown RBP eCLIP12.6□□□□□ -0.39
PTPN18-209ENST00000464576 RASSF7Q02833 373 aa12.6□□□□□ -0.39
PTPN18-209ENST00000464576 DPY19L2Q6NUT2 758 aa12.6□□□□□ -0.39
PTPN18-209ENST00000464576 SMC1BQ8NDV3 1235 aa12.6□□□□□ -0.39
PTPN18-209ENST00000464576 BRIP1Q9BX63 1249 aa12.6□□□□□ -0.39
PTPN18-209ENST00000464576 ZNF219Q9P2Y4 722 aaPredicted RBP12.6□□□□□ -0.39
PTPN18-209ENST00000464576 CARMIL3Q8ND23 1372 aa12.59□□□□□ -0.39
PTPN18-209ENST00000464576 DLEC1Q9Y238 1755 aa12.59□□□□□ -0.39
PTPN18-209ENST00000464576 VEGFAP15692 232 aaPredicted RBP12.59□□□□□ -0.39
PTPN18-209ENST00000464576 TBC1D9BQ66K14 1250 aa12.59□□□□□ -0.39
PTPN18-209ENST00000464576 CNBD1Q8NA66 436 aa12.59□□□□□ -0.39
PTPN18-209ENST00000464576 BCL2L12Q9HB09 334 aa12.59□□□□□ -0.39
PTPN18-209ENST00000464576 NRXN2Q9P2S2 1712 aa12.59□□□□□ -0.39
PTPN18-209ENST00000464576 A1BGP04217 495 aa12.58□□□□□ -0.4
PTPN18-209ENST00000464576 PHACTR3Q96KR7 559 aa12.58□□□□□ -0.4
PTPN18-209ENST00000464576 WDR90Q96KV7 1748 aa12.58□□□□□ -0.4
PTPN18-209ENST00000464576 ZNF652Q9Y2D9 606 aa12.58□□□□□ -0.4
PTPN18-209ENST00000464576 SIPA1L3O60292 1781 aaPredicted RBP12.58□□□□□ -0.4
PTPN18-209ENST00000464576 COL3A1P02461 1466 aaPredicted RBP12.58□□□□□ -0.4
PTPN18-209ENST00000464576 GLTPD2A6NH11 291 aa12.57□□□□□ -0.4
PTPN18-209ENST00000464576 C21orf2O43822 256 aa12.57□□□□□ -0.4
PTPN18-209ENST00000464576 DZIP3Q86Y13 1208 aaKnown RBP12.57□□□□□ -0.4
PTPN18-209ENST00000464576 CCDC24Q8N4L8 307 aa12.57□□□□□ -0.4
PTPN18-209ENST00000464576 CNKSR1Q969H4 720 aa12.57□□□□□ -0.4
PTPN18-209ENST00000464576 SNRPA1P09661 255 aaKnown RBP12.56□□□□□ -0.4
PTPN18-209ENST00000464576 ERFEQ4G0M1 354 aa12.56□□□□□ -0.4
PTPN18-209ENST00000464576 PRR5LQ6MZQ0 368 aa12.56□□□□□ -0.4
PTPN18-209ENST00000464576 NBPF5PQ86XG9 351 aaPredicted RBP12.56□□□□□ -0.4
PTPN18-209ENST00000464576 DNAJC5GQ8N7S2 189 aa12.56□□□□□ -0.4
PTPN18-209ENST00000464576 RSPH6AQ9H0K4 717 aa12.56□□□□□ -0.4
PTPN18-209ENST00000464576 CACNA1SQ13698 1873 aa12.55□□□□□ -0.4
PTPN18-209ENST00000464576 SCN7AQ01118 1682 aa12.55□□□□□ -0.4
PTPN18-209ENST00000464576 TIAM2Q8IVF5 1701 aa12.55□□□□□ -0.4
PTPN18-209ENST00000464576 GTF2E1P29083 439 aaPredicted RBP12.55□□□□□ -0.4
PTPN18-209ENST00000464576 SOGA3Q5TF21 947 aa12.55□□□□□ -0.4
PTPN18-209ENST00000464576 MCM10Q7L590 875 aa12.55□□□□□ -0.4
PTPN18-209ENST00000464576 KLRG1Q96E93 195 aa12.55□□□□□ -0.4
PTPN18-209ENST00000464576 KCNQ3O43525 872 aa12.54□□□□□ -0.4
PTPN18-209ENST00000464576 CAMTA2O94983 1202 aa12.54□□□□□ -0.4
PTPN18-209ENST00000464576 PPP2R1AP30153 589 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms