RNA–Protein interactions for RNA: ENST00000464408.3

ALMS1-202, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-202ENST00000464408 TM4SF1P30408 202 aa19.52■□□□□ 0.72
ALMS1-202ENST00000464408 ZPR1O75312 459 aa19.51■□□□□ 0.71
ALMS1-202ENST00000464408 FCHSD2O94868 740 aa19.51■□□□□ 0.71
ALMS1-202ENST00000464408 CHRNA5P30532 468 aa19.51■□□□□ 0.71
ALMS1-202ENST00000464408 PRKAR2BP31323 418 aa19.51■□□□□ 0.71
ALMS1-202ENST00000464408 GAS2L2Q8NHY3 880 aa19.51■□□□□ 0.71
ALMS1-202ENST00000464408 ZNF496Q96IT1 587 aaPredicted RBP19.51■□□□□ 0.71
ALMS1-202ENST00000464408 RSPH6AQ9H0K4 717 aa19.51■□□□□ 0.71
ALMS1-202ENST00000464408 BCL2L12Q9HB09 334 aa19.51■□□□□ 0.71
ALMS1-202ENST00000464408 NRXN2Q9P2S2 1712 aa19.51■□□□□ 0.71
ALMS1-202ENST00000464408 CEP350Q5VT06 3117 aa19.5■□□□□ 0.71
ALMS1-202ENST00000464408 CANXP27824 592 aaKnown RBP19.5■□□□□ 0.71
ALMS1-202ENST00000464408 PPP2R1AP30153 589 aa19.5■□□□□ 0.71
ALMS1-202ENST00000464408 VSIG10Q8N0Z9 540 aa19.5■□□□□ 0.71
ALMS1-202ENST00000464408 TEFQ10587 303 aa19.49■□□□□ 0.71
ALMS1-202ENST00000464408 NFIXQ14938 502 aa19.49■□□□□ 0.71
ALMS1-202ENST00000464408 ARHGAP27Q6ZUM4 889 aa19.49■□□□□ 0.71
ALMS1-202ENST00000464408 TTC5Q8N0Z6 440 aa19.49■□□□□ 0.71
ALMS1-202ENST00000464408 NARFQ9UHQ1 456 aa19.49■□□□□ 0.71
ALMS1-202ENST00000464408 CEMIPQ8WUJ3 1361 aa19.48■□□□□ 0.71
ALMS1-202ENST00000464408 KCNQ3O43525 872 aa19.48■□□□□ 0.71
ALMS1-202ENST00000464408 ZNF790Q6PG37 636 aa19.48■□□□□ 0.71
ALMS1-202ENST00000464408 HEG1Q9ULI3 1381 aa19.47■□□□□ 0.71
ALMS1-202ENST00000464408 CFAP53Q96M91 514 aa19.47■□□□□ 0.71
ALMS1-202ENST00000464408 SCN7AQ01118 1682 aa19.46■□□□□ 0.71
ALMS1-202ENST00000464408 PIM2Q9P1W9 311 aa19.46■□□□□ 0.71
ALMS1-202ENST00000464408 DLEC1Q9Y238 1755 aa19.46■□□□□ 0.71
ALMS1-202ENST00000464408 U2AF1L5P0DN76 240 aaPredicted RBP19.45■□□□□ 0.7
ALMS1-202ENST00000464408 EIF5P55010 431 aaKnown RBP19.45■□□□□ 0.7
ALMS1-202ENST00000464408 U2AF1Q01081 240 aaKnown RBP eCLIP19.45■□□□□ 0.7
ALMS1-202ENST00000464408 SBF1O95248 1867 aa19.45■□□□□ 0.7
ALMS1-202ENST00000464408 CARMIL3Q8ND23 1372 aa19.44■□□□□ 0.7
ALMS1-202ENST00000464408 KIF3CO14782 793 aa19.44■□□□□ 0.7
ALMS1-202ENST00000464408 STARD3NLO95772 234 aa19.44■□□□□ 0.7
ALMS1-202ENST00000464408 DALRD3Q5D0E6 543 aaKnown RBP19.44■□□□□ 0.7
ALMS1-202ENST00000464408 ANKRD31Q8N7Z5 1873 aa19.43■□□□□ 0.7
ALMS1-202ENST00000464408 SERPINB2P05120 415 aa19.43■□□□□ 0.7
ALMS1-202ENST00000464408 BICDL1Q6ZP65 573 aa19.43■□□□□ 0.7
ALMS1-202ENST00000464408 BTBD11A6QL63 1104 aa19.42■□□□□ 0.7
ALMS1-202ENST00000464408 A1BGP04217 495 aa19.42■□□□□ 0.7
ALMS1-202ENST00000464408 MCM10Q7L590 875 aa19.42■□□□□ 0.7
ALMS1-202ENST00000464408 NUDCQ9Y266 331 aa19.42■□□□□ 0.7
ALMS1-202ENST00000464408 ZNF330Q9Y3S2 320 aaPredicted RBP19.42■□□□□ 0.7
ALMS1-202ENST00000464408 DLG5Q8TDM6 1919 aa19.41■□□□□ 0.7
ALMS1-202ENST00000464408 PRAMEF22A3QJZ6 481 aa19.41■□□□□ 0.7
ALMS1-202ENST00000464408 PIP4K2AP48426 406 aaPredicted RBP19.41■□□□□ 0.7
ALMS1-202ENST00000464408 DCTN1Q14203 1278 aa19.41■□□□□ 0.7
ALMS1-202ENST00000464408 C9orf131Q5VYM1 1079 aa19.41■□□□□ 0.7
ALMS1-202ENST00000464408 FMNL2Q96PY5 1086 aa19.41■□□□□ 0.7
ALMS1-202ENST00000464408 TBC1D2BQ9UPU7 963 aa19.41■□□□□ 0.7
ALMS1-202ENST00000464408 BCORQ6W2J9 1755 aa19.41■□□□□ 0.7
ALMS1-202ENST00000464408 TBC1D9BQ66K14 1250 aa19.4■□□□□ 0.7
ALMS1-202ENST00000464408 COL11A2P13942 1736 aaPredicted RBP19.39■□□□□ 0.7
ALMS1-202ENST00000464408 CCDC24Q8N4L8 307 aa19.39■□□□□ 0.69
ALMS1-202ENST00000464408 NMRK2Q9NPI5 230 aa19.39■□□□□ 0.69
ALMS1-202ENST00000464408 A0A087WZG4 1122 aa19.38■□□□□ 0.69
ALMS1-202ENST00000464408 TEX13AQ9BXU3 409 aaPredicted RBP19.38■□□□□ 0.69
ALMS1-202ENST00000464408 USP16Q9Y5T5 823 aa19.38■□□□□ 0.69
ALMS1-202ENST00000464408 CCDC88AQ3V6T2 1871 aa19.37■□□□□ 0.69
ALMS1-202ENST00000464408 IL6STP40189 918 aaPredicted RBP19.37■□□□□ 0.69
ALMS1-202ENST00000464408 RASSF7Q02833 373 aa19.37■□□□□ 0.69
ALMS1-202ENST00000464408 CAMTA2O94983 1202 aa19.36■□□□□ 0.69
ALMS1-202ENST00000464408 C2CD5Q86YS7 1000 aa19.36■□□□□ 0.69
ALMS1-202ENST00000464408 RNF181Q9P0P0 153 aa19.36■□□□□ 0.69
ALMS1-202ENST00000464408 HSPA6P17066 643 aa19.35■□□□□ 0.69
ALMS1-202ENST00000464408 PRELPP51888 382 aa19.35■□□□□ 0.69
ALMS1-202ENST00000464408 RTF1Q92541 710 aaKnown RBP19.35■□□□□ 0.69
ALMS1-202ENST00000464408 CACNA1SQ13698 1873 aa19.35■□□□□ 0.69
ALMS1-202ENST00000464408 PRR5LQ6MZQ0 368 aa19.34■□□□□ 0.69
ALMS1-202ENST00000464408 MIS18AQ9NYP9 233 aa19.33■□□□□ 0.68
ALMS1-202ENST00000464408 KDM3BQ7LBC6 1761 aa19.33■□□□□ 0.68
ALMS1-202ENST00000464408 LAMB4A4D0S4 1761 aa19.32■□□□□ 0.68
ALMS1-202ENST00000464408 TIAM2Q8IVF5 1701 aa19.32■□□□□ 0.68
ALMS1-202ENST00000464408 DZIP3Q86Y13 1208 aaKnown RBP19.32■□□□□ 0.68
ALMS1-202ENST00000464408 TTLL6Q8N841 843 aa19.32■□□□□ 0.68
ALMS1-202ENST00000464408 NBPF26B4DH59 902 aa19.31■□□□□ 0.68
ALMS1-202ENST00000464408 H0YIN7 160 aa19.31■□□□□ 0.68
ALMS1-202ENST00000464408 SNRPA1P09661 255 aaKnown RBP19.31■□□□□ 0.68
ALMS1-202ENST00000464408 NBPF10Q6P3W6 841 aaKnown RBP19.31■□□□□ 0.68
ALMS1-202ENST00000464408 NBPF15Q8N660 670 aa19.31■□□□□ 0.68
ALMS1-202ENST00000464408 HTATSF1O43719 755 aaKnown RBP19.3■□□□□ 0.68
ALMS1-202ENST00000464408 PLEKHF1Q96S99 279 aa19.3■□□□□ 0.68
ALMS1-202ENST00000464408 TNRC6CQ9HCJ0 1690 aaKnown RBP19.3■□□□□ 0.68
ALMS1-202ENST00000464408 SLX4Q8IY92 1834 aa19.3■□□□□ 0.68
ALMS1-202ENST00000464408 TOMM70O94826 608 aa19.29■□□□□ 0.68
ALMS1-202ENST00000464408 THUMPD2Q9BTF0 503 aaKnown RBP19.29■□□□□ 0.68
ALMS1-202ENST00000464408 BRIP1Q9BX63 1249 aa19.29■□□□□ 0.68
ALMS1-202ENST00000464408 ZNF219Q9P2Y4 722 aaPredicted RBP19.29■□□□□ 0.68
ALMS1-202ENST00000464408 FER1L6Q2WGJ9 1857 aa19.28■□□□□ 0.68
ALMS1-202ENST00000464408 NFKBIEO00221 500 aa19.28■□□□□ 0.68
ALMS1-202ENST00000464408 TAF7Q15545 349 aaPredicted RBP19.28■□□□□ 0.68
ALMS1-202ENST00000464408 ZNF622Q969S3 477 aaKnown RBP eCLIP19.28■□□□□ 0.68
ALMS1-202ENST00000464408 SETDB2Q96T68 719 aa19.28■□□□□ 0.68
ALMS1-202ENST00000464408 NPM2Q86SE8 214 aaKnown RBP19.27■□□□□ 0.68
ALMS1-202ENST00000464408 CNBD1Q8NA66 436 aa19.27■□□□□ 0.68
ALMS1-202ENST00000464408 RRAGCQ9HB90 399 aa19.27■□□□□ 0.68
ALMS1-202ENST00000464408 ARFGEF2Q9Y6D5 1785 aa19.27■□□□□ 0.67
ALMS1-202ENST00000464408 LMNB1P20700 586 aa19.26■□□□□ 0.67
ALMS1-202ENST00000464408 PDE6BP35913 854 aa19.26■□□□□ 0.67
ALMS1-202ENST00000464408 C21orf2O43822 256 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms