RNA–Protein interactions for RNA: ENST00000464317.3

RN7SL541P-201, Transcript of RNA, 7SL, cytoplasmic 541, pseudogene, humanhuman

BASIC

Gene RN7SL541P, Length 283 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL541P-201ENST00000464317 NFIXQ14938 502 aa12.33□□□□□ -0.44
RN7SL541P-201ENST00000464317 NARFQ9UHQ1 456 aa12.33□□□□□ -0.44
RN7SL541P-201ENST00000464317 COL15A1P39059 1388 aa12.32□□□□□ -0.44
RN7SL541P-201ENST00000464317 RASSF7Q02833 373 aa12.32□□□□□ -0.44
RN7SL541P-201ENST00000464317 KLRG1Q96E93 195 aa12.32□□□□□ -0.44
RN7SL541P-201ENST00000464317 ZBTB1Q9Y2K1 713 aa12.32□□□□□ -0.44
RN7SL541P-201ENST00000464317 SCN11AQ9UI33 1791 aa12.32□□□□□ -0.44
RN7SL541P-201ENST00000464317 WDR90Q96KV7 1748 aa12.31□□□□□ -0.44
RN7SL541P-201ENST00000464317 SERPINB2P05120 415 aa12.31□□□□□ -0.44
RN7SL541P-201ENST00000464317 SMC1BQ8NDV3 1235 aa12.31□□□□□ -0.44
RN7SL541P-201ENST00000464317 ADAMTS7Q9UKP4 1686 aa12.31□□□□□ -0.44
RN7SL541P-201ENST00000464317 MRC1P22897 1456 aa12.3□□□□□ -0.44
RN7SL541P-201ENST00000464317 LMNB1P20700 586 aa12.3□□□□□ -0.44
RN7SL541P-201ENST00000464317 CANXP27824 592 aaKnown RBP12.3□□□□□ -0.44
RN7SL541P-201ENST00000464317 MTHFSDQ2M296 383 aaKnown RBP12.3□□□□□ -0.44
RN7SL541P-201ENST00000464317 AMER1Q5JTC6 1135 aaPredicted RBP12.3□□□□□ -0.44
RN7SL541P-201ENST00000464317 VSIG10Q8N0Z9 540 aa12.3□□□□□ -0.44
RN7SL541P-201ENST00000464317 TTLL6Q8N841 843 aa12.3□□□□□ -0.44
RN7SL541P-201ENST00000464317 ZC3H4Q9UPT8 1303 aaKnown RBP12.3□□□□□ -0.44
RN7SL541P-201ENST00000464317 H0YIN7 160 aa12.29□□□□□ -0.44
RN7SL541P-201ENST00000464317 DIAPH1O60610 1272 aaKnown RBP12.29□□□□□ -0.44
RN7SL541P-201ENST00000464317 BICDL1Q6ZP65 573 aa12.29□□□□□ -0.44
RN7SL541P-201ENST00000464317 C2CD5Q86YS7 1000 aa12.29□□□□□ -0.44
RN7SL541P-201ENST00000464317 TTC5Q8N0Z6 440 aa12.29□□□□□ -0.44
RN7SL541P-201ENST00000464317 JMYQ8N9B5 988 aa12.29□□□□□ -0.44
RN7SL541P-201ENST00000464317 BCL2L12Q9HB09 334 aa12.29□□□□□ -0.44
RN7SL541P-201ENST00000464317 TNRC6CQ9HCJ0 1690 aaKnown RBP12.29□□□□□ -0.44
RN7SL541P-201ENST00000464317 A0A087WZG4 1122 aa12.28□□□□□ -0.44
RN7SL541P-201ENST00000464317 GLTPD2A6NH11 291 aa12.28□□□□□ -0.44
RN7SL541P-201ENST00000464317 STARD3NLO95772 234 aa12.28□□□□□ -0.44
RN7SL541P-201ENST00000464317 VEGFAP15692 232 aaPredicted RBP12.27□□□□□ -0.45
RN7SL541P-201ENST00000464317 SBF1O95248 1867 aa12.27□□□□□ -0.45
RN7SL541P-201ENST00000464317 AFDNP55196 1824 aaKnown RBP12.26□□□□□ -0.45
RN7SL541P-201ENST00000464317 PRELPP51888 382 aa12.26□□□□□ -0.45
RN7SL541P-201ENST00000464317 EIF5P55010 431 aaKnown RBP12.26□□□□□ -0.45
RN7SL541P-201ENST00000464317 CC2D1BQ5T0F9 858 aaKnown RBP12.26□□□□□ -0.45
RN7SL541P-201ENST00000464317 CCER1Q8TC90 406 aaPredicted RBP12.26□□□□□ -0.45
RN7SL541P-201ENST00000464317 ZNF622Q969S3 477 aaKnown RBP eCLIP12.26□□□□□ -0.45
RN7SL541P-201ENST00000464317 ZNF330Q9Y3S2 320 aaPredicted RBP12.26□□□□□ -0.45
RN7SL541P-201ENST00000464317 CARMIL3Q8ND23 1372 aa12.26□□□□□ -0.45
RN7SL541P-201ENST00000464317 NRXN2Q9P2S2 1712 aa12.25□□□□□ -0.45
RN7SL541P-201ENST00000464317 NFKBIEO00221 500 aa12.25□□□□□ -0.45
RN7SL541P-201ENST00000464317 TEFQ10587 303 aa12.25□□□□□ -0.45
RN7SL541P-201ENST00000464317 COL13A1Q5TAT6 717 aaPredicted RBP12.25□□□□□ -0.45
RN7SL541P-201ENST00000464317 TBC1D9BQ66K14 1250 aa12.25□□□□□ -0.45
RN7SL541P-201ENST00000464317 DPY19L2Q6NUT2 758 aa12.25□□□□□ -0.45
RN7SL541P-201ENST00000464317 KIF7Q2M1P5 1343 aa12.25□□□□□ -0.45
RN7SL541P-201ENST00000464317 U2SURPO15042 1029 aaKnown RBP12.24□□□□□ -0.45
RN7SL541P-201ENST00000464317 NPHP1O15259 732 aa12.24□□□□□ -0.45
RN7SL541P-201ENST00000464317 PDE6BP35913 854 aa12.24□□□□□ -0.45
RN7SL541P-201ENST00000464317 NPM2Q86SE8 214 aaKnown RBP12.24□□□□□ -0.45
RN7SL541P-201ENST00000464317 GAS2L2Q8NHY3 880 aa12.24□□□□□ -0.45
RN7SL541P-201ENST00000464317 ZNF496Q96IT1 587 aaPredicted RBP12.24□□□□□ -0.45
RN7SL541P-201ENST00000464317 BRIP1Q9BX63 1249 aa12.24□□□□□ -0.45
RN7SL541P-201ENST00000464317 TEX13AQ9BXU3 409 aaPredicted RBP12.24□□□□□ -0.45
RN7SL541P-201ENST00000464317 ZNF219Q9P2Y4 722 aaPredicted RBP12.24□□□□□ -0.45
RN7SL541P-201ENST00000464317 PDZRN3Q9UPQ7 1066 aa12.24□□□□□ -0.45
RN7SL541P-201ENST00000464317 TBC1D2BQ9UPU7 963 aa12.24□□□□□ -0.45
RN7SL541P-201ENST00000464317 DLEC1Q9Y238 1755 aa12.23□□□□□ -0.45
RN7SL541P-201ENST00000464317 HEG1Q9ULI3 1381 aa12.23□□□□□ -0.45
RN7SL541P-201ENST00000464317 GNAT3A8MTJ3 354 aa12.23□□□□□ -0.45
RN7SL541P-201ENST00000464317 C21orf2O43822 256 aa12.23□□□□□ -0.45
RN7SL541P-201ENST00000464317 CNGB1Q14028 1251 aaPredicted RBP12.23□□□□□ -0.45
RN7SL541P-201ENST00000464317 ZNF790Q6PG37 636 aa12.23□□□□□ -0.45
RN7SL541P-201ENST00000464317 CCDC24Q8N4L8 307 aa12.23□□□□□ -0.45
RN7SL541P-201ENST00000464317 PER1O15534 1290 aaPredicted RBP12.22□□□□□ -0.45
RN7SL541P-201ENST00000464317 IL6STP40189 918 aaPredicted RBP12.22□□□□□ -0.45
RN7SL541P-201ENST00000464317 ERFEQ4G0M1 354 aa12.22□□□□□ -0.45
RN7SL541P-201ENST00000464317 PRR5LQ6MZQ0 368 aa12.22□□□□□ -0.45
RN7SL541P-201ENST00000464317 TNS4Q8IZW8 715 aa12.22□□□□□ -0.45
RN7SL541P-201ENST00000464317 IL17REQ8NFR9 667 aa12.22□□□□□ -0.45
RN7SL541P-201ENST00000464317 VIRMAQ69YN4 1812 aaKnown RBP12.22□□□□□ -0.45
RN7SL541P-201ENST00000464317 UBR2Q8IWV8 1755 aa12.22□□□□□ -0.45
RN7SL541P-201ENST00000464317 TIAM2Q8IVF5 1701 aa12.21□□□□□ -0.45
RN7SL541P-201ENST00000464317 CAPN15O75808 1086 aa12.21□□□□□ -0.45
RN7SL541P-201ENST00000464317 CNBD1Q8NA66 436 aa12.21□□□□□ -0.45
RN7SL541P-201ENST00000464317 FMNL2Q96PY5 1086 aa12.21□□□□□ -0.45
RN7SL541P-201ENST00000464317 SETDB2Q96T68 719 aa12.21□□□□□ -0.45
RN7SL541P-201ENST00000464317 POTECB2RU33 542 aa12.2□□□□□ -0.46
RN7SL541P-201ENST00000464317 A1BGP04217 495 aa12.2□□□□□ -0.46
RN7SL541P-201ENST00000464317 HSPA1AP0DMV8 641 aaKnown RBP12.2□□□□□ -0.46
RN7SL541P-201ENST00000464317 HSPA1BP0DMV9 641 aaKnown RBP12.2□□□□□ -0.46
RN7SL541P-201ENST00000464317 ST5P78524 1137 aa12.2□□□□□ -0.46
RN7SL541P-201ENST00000464317 CNKSR1Q969H4 720 aa12.2□□□□□ -0.46
RN7SL541P-201ENST00000464317 TAOK3Q9H2K8 898 aa12.2□□□□□ -0.46
RN7SL541P-201ENST00000464317 BTBD11A6QL63 1104 aa12.19□□□□□ -0.46
RN7SL541P-201ENST00000464317 CAMTA2O94983 1202 aa12.19□□□□□ -0.46
RN7SL541P-201ENST00000464317 DZIP3Q86Y13 1208 aaKnown RBP12.19□□□□□ -0.46
RN7SL541P-201ENST00000464317 LTBP3Q9NS15 1303 aa12.18□□□□□ -0.46
RN7SL541P-201ENST00000464317 SOGA3Q5TF21 947 aa12.18□□□□□ -0.46
RN7SL541P-201ENST00000464317 STYK1Q6J9G0 422 aa12.18□□□□□ -0.46
RN7SL541P-201ENST00000464317 MASTLQ96GX5 879 aa12.18□□□□□ -0.46
RN7SL541P-201ENST00000464317 COL3A1P02461 1466 aaPredicted RBP12.18□□□□□ -0.46
RN7SL541P-201ENST00000464317 SCN7AQ01118 1682 aa12.18□□□□□ -0.46
RN7SL541P-201ENST00000464317 CCDC88AQ3V6T2 1871 aa12.18□□□□□ -0.46
RN7SL541P-201ENST00000464317 ANKRD31Q8N7Z5 1873 aa12.17□□□□□ -0.46
RN7SL541P-201ENST00000464317 KCNQ3O43525 872 aa12.17□□□□□ -0.46
RN7SL541P-201ENST00000464317 DDNO94850 711 aaPredicted RBP12.17□□□□□ -0.46
RN7SL541P-201ENST00000464317 SRGNP10124 158 aa12.17□□□□□ -0.46
RN7SL541P-201ENST00000464317 CHADLQ6NUI6 762 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms