RNA–Protein interactions for RNA: ENST00000464255.1

CTDSP1-206, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-206ENST00000464255 HEG1Q9ULI3 1381 aa17.48■□□□□ 0.39
CTDSP1-206ENST00000464255 A0A0G2JLW4 131 aa17.47■□□□□ 0.39
CTDSP1-206ENST00000464255 KCNA3P22001 575 aa17.47■□□□□ 0.39
CTDSP1-206ENST00000464255 EIF5P55010 431 aaKnown RBP17.47■□□□□ 0.39
CTDSP1-206ENST00000464255 TGFB2P61812 414 aa17.47■□□□□ 0.39
CTDSP1-206ENST00000464255 DCTN1Q14203 1278 aa17.47■□□□□ 0.39
CTDSP1-206ENST00000464255 TTC5Q8N0Z6 440 aa17.47■□□□□ 0.39
CTDSP1-206ENST00000464255 NARFQ9UHQ1 456 aa17.47■□□□□ 0.39
CTDSP1-206ENST00000464255 PARP3Q9Y6F1 533 aa17.47■□□□□ 0.39
CTDSP1-206ENST00000464255 POLRMTO00411 1230 aaKnown RBP17.46■□□□□ 0.39
CTDSP1-206ENST00000464255 COL15A1P39059 1388 aa17.45■□□□□ 0.38
CTDSP1-206ENST00000464255 BTBD11A6QL63 1104 aa17.45■□□□□ 0.38
CTDSP1-206ENST00000464255 HTATSF1O43719 755 aaKnown RBP17.45■□□□□ 0.38
CTDSP1-206ENST00000464255 STARD3NLO95772 234 aa17.45■□□□□ 0.38
CTDSP1-206ENST00000464255 DPEP1P16444 411 aa17.45■□□□□ 0.38
CTDSP1-206ENST00000464255 CANXP27824 592 aaKnown RBP17.45■□□□□ 0.38
CTDSP1-206ENST00000464255 DDX10Q13206 875 aaKnown RBP17.45■□□□□ 0.38
CTDSP1-206ENST00000464255 ZPR1O75312 459 aa17.44■□□□□ 0.38
CTDSP1-206ENST00000464255 NFIXQ14938 502 aa17.44■□□□□ 0.38
CTDSP1-206ENST00000464255 FMNL2Q96PY5 1086 aa17.44■□□□□ 0.38
CTDSP1-206ENST00000464255 PRAMEF22A3QJZ6 481 aa17.43■□□□□ 0.38
CTDSP1-206ENST00000464255 A1BGP04217 495 aa17.43■□□□□ 0.38
CTDSP1-206ENST00000464255 TEX13AQ9BXU3 409 aaPredicted RBP17.43■□□□□ 0.38
CTDSP1-206ENST00000464255 USP16Q9Y5T5 823 aa17.43■□□□□ 0.38
CTDSP1-206ENST00000464255 N4BP2Q86UW6 1770 aaPredicted RBP17.43■□□□□ 0.38
CTDSP1-206ENST00000464255 RALBP1Q15311 655 aa17.42■□□□□ 0.38
CTDSP1-206ENST00000464255 RTF1Q92541 710 aaKnown RBP17.42■□□□□ 0.38
CTDSP1-206ENST00000464255 TAF7Q15545 349 aaPredicted RBP17.4■□□□□ 0.38
CTDSP1-206ENST00000464255 MIS18AQ9NYP9 233 aa17.4■□□□□ 0.38
CTDSP1-206ENST00000464255 ADCY9O60503 1353 aa17.4■□□□□ 0.38
CTDSP1-206ENST00000464255 IL6STP40189 918 aaPredicted RBP17.39■□□□□ 0.37
CTDSP1-206ENST00000464255 TBC1D2BQ9UPU7 963 aa17.39■□□□□ 0.37
CTDSP1-206ENST00000464255 A0A087WZG4 1122 aa17.38■□□□□ 0.37
CTDSP1-206ENST00000464255 CHRNA5P30532 468 aa17.38■□□□□ 0.37
CTDSP1-206ENST00000464255 NFE2L2Q16236 605 aa17.38■□□□□ 0.37
CTDSP1-206ENST00000464255 THUMPD2Q9BTF0 503 aaKnown RBP17.38■□□□□ 0.37
CTDSP1-206ENST00000464255 BCS1LQ9Y276 419 aa17.38■□□□□ 0.37
CTDSP1-206ENST00000464255 BRCA1P38398 1863 aaKnown RBP17.37■□□□□ 0.37
CTDSP1-206ENST00000464255 CAMTA2O94983 1202 aa17.37■□□□□ 0.37
CTDSP1-206ENST00000464255 SERPINB2P05120 415 aa17.37■□□□□ 0.37
CTDSP1-206ENST00000464255 SNRPA1P09661 255 aaKnown RBP17.37■□□□□ 0.37
CTDSP1-206ENST00000464255 PIP4K2AP48426 406 aaPredicted RBP17.37■□□□□ 0.37
CTDSP1-206ENST00000464255 TBC1D9BQ66K14 1250 aa17.37■□□□□ 0.37
CTDSP1-206ENST00000464255 NRXN2Q9P2S2 1712 aa17.37■□□□□ 0.37
CTDSP1-206ENST00000464255 ATP10DQ9P241 1426 aa17.37■□□□□ 0.37
CTDSP1-206ENST00000464255 AFDNP55196 1824 aaKnown RBP17.36■□□□□ 0.37
CTDSP1-206ENST00000464255 NBPF26B4DH59 902 aa17.36■□□□□ 0.37
CTDSP1-206ENST00000464255 NBPF10Q6P3W6 841 aaKnown RBP17.36■□□□□ 0.37
CTDSP1-206ENST00000464255 NBPF15Q8N660 670 aa17.36■□□□□ 0.37
CTDSP1-206ENST00000464255 PIM2Q9P1W9 311 aa17.36■□□□□ 0.37
CTDSP1-206ENST00000464255 DLG5Q8TDM6 1919 aa17.35■□□□□ 0.37
CTDSP1-206ENST00000464255 BICDL1Q6ZP65 573 aa17.34■□□□□ 0.37
CTDSP1-206ENST00000464255 CARMIL3Q8ND23 1372 aa17.34■□□□□ 0.37
CTDSP1-206ENST00000464255 MYBBP1AQ9BQG0 1328 aaKnown RBP17.33■□□□□ 0.36
CTDSP1-206ENST00000464255 C1QTNF8P60827 252 aa17.33■□□□□ 0.36
CTDSP1-206ENST00000464255 DALRD3Q5D0E6 543 aaKnown RBP17.33■□□□□ 0.36
CTDSP1-206ENST00000464255 ZNF330Q9Y3S2 320 aaPredicted RBP17.33■□□□□ 0.36
CTDSP1-206ENST00000464255 EIF4A1P60842 406 aaKnown RBP17.32■□□□□ 0.36
CTDSP1-206ENST00000464255 ARHGAP27Q6ZUM4 889 aa17.32■□□□□ 0.36
CTDSP1-206ENST00000464255 PNNQ9H307 717 aaKnown RBP17.32■□□□□ 0.36
CTDSP1-206ENST00000464255 GIGYF1O75420 1035 aaPredicted RBP17.31■□□□□ 0.36
CTDSP1-206ENST00000464255 NEFMP07197 916 aa17.31■□□□□ 0.36
CTDSP1-206ENST00000464255 DZIP3Q86Y13 1208 aaKnown RBP17.31■□□□□ 0.36
CTDSP1-206ENST00000464255 SCN7AQ01118 1682 aa17.31■□□□□ 0.36
CTDSP1-206ENST00000464255 CEP350Q5VT06 3117 aa17.31■□□□□ 0.36
CTDSP1-206ENST00000464255 PRR5LQ6MZQ0 368 aa17.3■□□□□ 0.36
CTDSP1-206ENST00000464255 CCDC24Q8N4L8 307 aa17.3■□□□□ 0.36
CTDSP1-206ENST00000464255 PNISRQ8TF01 805 aaKnown RBP17.3■□□□□ 0.36
CTDSP1-206ENST00000464255 MAPK8IP3Q9UPT6 1336 aa17.29■□□□□ 0.36
CTDSP1-206ENST00000464255 ARFGEF1Q9Y6D6 1849 aa17.29■□□□□ 0.36
CTDSP1-206ENST00000464255 TMPOP42166 694 aaKnown RBP17.29■□□□□ 0.36
CTDSP1-206ENST00000464255 RIPK4P57078 832 aa17.29■□□□□ 0.36
CTDSP1-206ENST00000464255 PRKRIP1Q9H875 184 aaPredicted RBP17.29■□□□□ 0.36
CTDSP1-206ENST00000464255 KDM3BQ7LBC6 1761 aa17.29■□□□□ 0.36
CTDSP1-206ENST00000464255 CLEC4GQ6UXB4 293 aa17.28■□□□□ 0.36
CTDSP1-206ENST00000464255 C2CD5Q86YS7 1000 aa17.28■□□□□ 0.36
CTDSP1-206ENST00000464255 BRIP1Q9BX63 1249 aa17.28■□□□□ 0.36
CTDSP1-206ENST00000464255 CCDC146Q8IYE0 955 aa17.27■□□□□ 0.36
CTDSP1-206ENST00000464255 ZNF526Q8TF50 670 aaPredicted RBP17.27■□□□□ 0.36
CTDSP1-206ENST00000464255 SETDB2Q96T68 719 aa17.27■□□□□ 0.36
CTDSP1-206ENST00000464255 GPBP1L1Q9HC44 474 aaPredicted RBP17.27■□□□□ 0.36
CTDSP1-206ENST00000464255 ADAMTS8Q9UP79 889 aa17.27■□□□□ 0.36
CTDSP1-206ENST00000464255 ANKRD31Q8N7Z5 1873 aa17.27■□□□□ 0.35
CTDSP1-206ENST00000464255 BCORQ6W2J9 1755 aa17.26■□□□□ 0.35
CTDSP1-206ENST00000464255 PRELPP51888 382 aa17.26■□□□□ 0.35
CTDSP1-206ENST00000464255 HLFQ16534 295 aa17.26■□□□□ 0.35
CTDSP1-206ENST00000464255 C9orf131Q5VYM1 1079 aa17.26■□□□□ 0.35
CTDSP1-206ENST00000464255 TRIM35Q9UPQ4 493 aa17.26■□□□□ 0.35
CTDSP1-206ENST00000464255 RRP7AQ9Y3A4 280 aaKnown RBP17.26■□□□□ 0.35
CTDSP1-206ENST00000464255 H0YIN7 160 aa17.25■□□□□ 0.35
CTDSP1-206ENST00000464255 RGL2O15211 777 aa17.25■□□□□ 0.35
CTDSP1-206ENST00000464255 TTLL6Q8N841 843 aa17.25■□□□□ 0.35
CTDSP1-206ENST00000464255 KIF3CO14782 793 aa17.24■□□□□ 0.35
CTDSP1-206ENST00000464255 LRP10Q7Z4F1 713 aa17.24■□□□□ 0.35
CTDSP1-206ENST00000464255 NPM2Q86SE8 214 aaKnown RBP17.24■□□□□ 0.35
CTDSP1-206ENST00000464255 DLEC1Q9Y238 1755 aa17.24■□□□□ 0.35
CTDSP1-206ENST00000464255 PDE6BP35913 854 aa17.23■□□□□ 0.35
CTDSP1-206ENST00000464255 TTLL7Q6ZT98 887 aa17.23■□□□□ 0.35
CTDSP1-206ENST00000464255 CNBD1Q8NA66 436 aa17.23■□□□□ 0.35
CTDSP1-206ENST00000464255 RUNDC1Q96C34 613 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms