RNA–Protein interactions for RNA: ENST00000463632.1

RPA3-206, Transcript of replication protein A3, humanhuman

TSL 5

Gene RPA3, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-206ENST00000463632 NMRK2Q9NPI5 230 aa16.55■□□□□ 0.24
RPA3-206ENST00000463632 NARFQ9UHQ1 456 aa16.55■□□□□ 0.24
RPA3-206ENST00000463632 GNAT3A8MTJ3 354 aa16.54■□□□□ 0.24
RPA3-206ENST00000463632 NPHP1O15259 732 aa16.54■□□□□ 0.24
RPA3-206ENST00000463632 COL15A1P39059 1388 aa16.53■□□□□ 0.24
RPA3-206ENST00000463632 SERPINB2P05120 415 aa16.53■□□□□ 0.24
RPA3-206ENST00000463632 VSIG10Q8N0Z9 540 aa16.53■□□□□ 0.24
RPA3-206ENST00000463632 A0A087WZG4 1122 aa16.52■□□□□ 0.24
RPA3-206ENST00000463632 TOMM70O94826 608 aa16.52■□□□□ 0.24
RPA3-206ENST00000463632 NUDCQ9Y266 331 aa16.52■□□□□ 0.24
RPA3-206ENST00000463632 C4AP0C0L4 1744 aa16.52■□□□□ 0.24
RPA3-206ENST00000463632 C2CD5Q86YS7 1000 aa16.51■□□□□ 0.23
RPA3-206ENST00000463632 ZNF496Q96IT1 587 aaPredicted RBP16.51■□□□□ 0.23
RPA3-206ENST00000463632 KDM2BQ8NHM5 1336 aa16.5■□□□□ 0.23
RPA3-206ENST00000463632 H0YIN7 160 aa16.5■□□□□ 0.23
RPA3-206ENST00000463632 PRKAR2BP31323 418 aa16.5■□□□□ 0.23
RPA3-206ENST00000463632 ZNF790Q6PG37 636 aa16.5■□□□□ 0.23
RPA3-206ENST00000463632 IL17REQ8NFR9 667 aa16.5■□□□□ 0.23
RPA3-206ENST00000463632 TEX13AQ9BXU3 409 aaPredicted RBP16.5■□□□□ 0.23
RPA3-206ENST00000463632 TBC1D2BQ9UPU7 963 aa16.5■□□□□ 0.23
RPA3-206ENST00000463632 U2AF1L5P0DN76 240 aaPredicted RBP16.49■□□□□ 0.23
RPA3-206ENST00000463632 APLP1P51693 650 aa16.49■□□□□ 0.23
RPA3-206ENST00000463632 U2AF1Q01081 240 aaKnown RBP eCLIP16.49■□□□□ 0.23
RPA3-206ENST00000463632 RASSF7Q02833 373 aa16.49■□□□□ 0.23
RPA3-206ENST00000463632 ZNF622Q969S3 477 aaKnown RBP eCLIP16.49■□□□□ 0.23
RPA3-206ENST00000463632 FMNL2Q96PY5 1086 aa16.49■□□□□ 0.23
RPA3-206ENST00000463632 ZNF831Q5JPB2 1677 aa16.49■□□□□ 0.23
RPA3-206ENST00000463632 N4BP2Q86UW6 1770 aaPredicted RBP16.49■□□□□ 0.23
RPA3-206ENST00000463632 BTBD11A6QL63 1104 aa16.48■□□□□ 0.23
RPA3-206ENST00000463632 TTLL6Q8N841 843 aa16.48■□□□□ 0.23
RPA3-206ENST00000463632 RTF1Q92541 710 aaKnown RBP16.48■□□□□ 0.23
RPA3-206ENST00000463632 BCL2L12Q9HB09 334 aa16.48■□□□□ 0.23
RPA3-206ENST00000463632 RRAGCQ9HB90 399 aa16.48■□□□□ 0.23
RPA3-206ENST00000463632 ZNF219Q9P2Y4 722 aaPredicted RBP16.48■□□□□ 0.23
RPA3-206ENST00000463632 COL5A3P25940 1745 aaPredicted RBP16.48■□□□□ 0.23
RPA3-206ENST00000463632 CCDC24Q8N4L8 307 aa16.47■□□□□ 0.23
RPA3-206ENST00000463632 MYH14Q7Z406 1995 aaKnown RBP16.46■□□□□ 0.23
RPA3-206ENST00000463632 A1BGP04217 495 aa16.46■□□□□ 0.23
RPA3-206ENST00000463632 EIF5P55010 431 aaKnown RBP16.46■□□□□ 0.23
RPA3-206ENST00000463632 TBC1D9BQ66K14 1250 aa16.46■□□□□ 0.23
RPA3-206ENST00000463632 PHACTR3Q96KR7 559 aa16.46■□□□□ 0.23
RPA3-206ENST00000463632 NPC1L1Q9UHC9 1359 aa16.46■□□□□ 0.23
RPA3-206ENST00000463632 HEG1Q9ULI3 1381 aa16.46■□□□□ 0.23
RPA3-206ENST00000463632 MRC1P22897 1456 aa16.46■□□□□ 0.23
RPA3-206ENST00000463632 KCPQ6ZWJ8 1503 aa16.45■□□□□ 0.22
RPA3-206ENST00000463632 TJP1Q07157 1748 aa16.45■□□□□ 0.22
RPA3-206ENST00000463632 KCNQ3O43525 872 aa16.44■□□□□ 0.22
RPA3-206ENST00000463632 LMNB1P20700 586 aa16.44■□□□□ 0.22
RPA3-206ENST00000463632 RBM46Q8TBY0 533 aaKnown RBP16.44■□□□□ 0.22
RPA3-206ENST00000463632 SETDB2Q96T68 719 aa16.44■□□□□ 0.22
RPA3-206ENST00000463632 NEFMP07197 916 aa16.43■□□□□ 0.22
RPA3-206ENST00000463632 PDE6BP35913 854 aa16.43■□□□□ 0.22
RPA3-206ENST00000463632 IL6STP40189 918 aaPredicted RBP16.43■□□□□ 0.22
RPA3-206ENST00000463632 PIP4K2AP48426 406 aaPredicted RBP16.43■□□□□ 0.22
RPA3-206ENST00000463632 MCM10Q7L590 875 aa16.43■□□□□ 0.22
RPA3-206ENST00000463632 DZIP3Q86Y13 1208 aaKnown RBP16.43■□□□□ 0.22
RPA3-206ENST00000463632 RSPH6AQ9H0K4 717 aa16.43■□□□□ 0.22
RPA3-206ENST00000463632 SCN11AQ9UI33 1791 aa16.43■□□□□ 0.22
RPA3-206ENST00000463632 ST5P78524 1137 aa16.42■□□□□ 0.22
RPA3-206ENST00000463632 IFFO2Q5TF58 517 aa16.42■□□□□ 0.22
RPA3-206ENST00000463632 CNBD1Q8NA66 436 aa16.42■□□□□ 0.22
RPA3-206ENST00000463632 CARMIL3Q8ND23 1372 aa16.41■□□□□ 0.22
RPA3-206ENST00000463632 KIF13BQ9NQT8 1826 aa16.41■□□□□ 0.22
RPA3-206ENST00000463632 C21orf2O43822 256 aa16.41■□□□□ 0.22
RPA3-206ENST00000463632 PPP2R1AP30153 589 aa16.41■□□□□ 0.22
RPA3-206ENST00000463632 BRIP1Q9BX63 1249 aa16.41■□□□□ 0.22
RPA3-206ENST00000463632 COL3A1P02461 1466 aaPredicted RBP16.41■□□□□ 0.22
RPA3-206ENST00000463632 KIAA1551Q9HCM1 1747 aa16.4■□□□□ 0.22
RPA3-206ENST00000463632 HTRA3P83110 453 aa16.4■□□□□ 0.22
RPA3-206ENST00000463632 FSTL1Q12841 308 aa16.4■□□□□ 0.22
RPA3-206ENST00000463632 DCTN1Q14203 1278 aa16.4■□□□□ 0.22
RPA3-206ENST00000463632 PRR5LQ6MZQ0 368 aa16.4■□□□□ 0.22
RPA3-206ENST00000463632 PDZRN3Q9UPQ7 1066 aa16.4■□□□□ 0.22
RPA3-206ENST00000463632 USP16Q9Y5T5 823 aa16.4■□□□□ 0.22
RPA3-206ENST00000463632 FAM177BA6PVY3 158 aa16.39■□□□□ 0.21
RPA3-206ENST00000463632 SNRPA1P09661 255 aaKnown RBP16.39■□□□□ 0.21
RPA3-206ENST00000463632 SMC1BQ8NDV3 1235 aa16.39■□□□□ 0.21
RPA3-206ENST00000463632 PRAMEF22A3QJZ6 481 aa16.38■□□□□ 0.21
RPA3-206ENST00000463632 CAMTA2O94983 1202 aa16.38■□□□□ 0.21
RPA3-206ENST00000463632 VEGFAP15692 232 aaPredicted RBP16.38■□□□□ 0.21
RPA3-206ENST00000463632 DPY19L2Q6NUT2 758 aa16.38■□□□□ 0.21
RPA3-206ENST00000463632 NBPF5PQ86XG9 351 aaPredicted RBP16.38■□□□□ 0.21
RPA3-206ENST00000463632 ZNF652Q9Y2D9 606 aa16.38■□□□□ 0.21
RPA3-206ENST00000463632 GLTPD2A6NH11 291 aa16.37■□□□□ 0.21
RPA3-206ENST00000463632 ERFEQ4G0M1 354 aa16.37■□□□□ 0.21
RPA3-206ENST00000463632 CNKSR1Q969H4 720 aa16.37■□□□□ 0.21
RPA3-206ENST00000463632 CEMIPQ8WUJ3 1361 aa16.37■□□□□ 0.21
RPA3-206ENST00000463632 NFKBIEO00221 500 aa16.36■□□□□ 0.21
RPA3-206ENST00000463632 GTF2E1P29083 439 aaPredicted RBP16.36■□□□□ 0.21
RPA3-206ENST00000463632 NGEFQ8N5V2 710 aa16.36■□□□□ 0.21
RPA3-206ENST00000463632 ZC3H4Q9UPT8 1303 aaKnown RBP16.36■□□□□ 0.21
RPA3-206ENST00000463632 PRELPP51888 382 aa16.35■□□□□ 0.21
RPA3-206ENST00000463632 MIS18AQ9NYP9 233 aa16.35■□□□□ 0.21
RPA3-206ENST00000463632 CEP350Q5VT06 3117 aa16.34■□□□□ 0.21
RPA3-206ENST00000463632 TAF7Q15545 349 aaPredicted RBP16.34■□□□□ 0.21
RPA3-206ENST00000463632 PRPF40BQ6NWY9 871 aaKnown RBP16.34■□□□□ 0.21
RPA3-206ENST00000463632 DNAJC5GQ8N7S2 189 aa16.34■□□□□ 0.21
RPA3-206ENST00000463632 MASTLQ96GX5 879 aa16.34■□□□□ 0.21
RPA3-206ENST00000463632 TAOK3Q9H2K8 898 aa16.34■□□□□ 0.21
RPA3-206ENST00000463632 NIP7Q9Y221 180 aaKnown RBP eCLIP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms