RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 VEGFAP15692 232 aaPredicted RBP15.36■□□□□ 0.05
SSR3-202ENST00000463503 CRKLP46109 303 aaKnown RBP15.36■□□□□ 0.05
SSR3-202ENST00000463503 ADAMTSL1Q8N6G6 1762 aa15.35■□□□□ 0.05
SSR3-202ENST00000463503 POTECB2RU33 542 aa15.35■□□□□ 0.05
SSR3-202ENST00000463503 PPM1GO15355 546 aaPredicted RBP15.35■□□□□ 0.05
SSR3-202ENST00000463503 LMNB1P20700 586 aa15.35■□□□□ 0.05
SSR3-202ENST00000463503 MRC1P22897 1456 aa15.34■□□□□ 0.05
SSR3-202ENST00000463503 TM4SF1P30408 202 aa15.34■□□□□ 0.05
SSR3-202ENST00000463503 EIF4A2Q14240 407 aaKnown RBP15.34■□□□□ 0.05
SSR3-202ENST00000463503 CARMIL3Q8ND23 1372 aa15.34■□□□□ 0.05
SSR3-202ENST00000463503 NFKBIEO00221 500 aa15.33■□□□□ 0.04
SSR3-202ENST00000463503 HSPA5P11021 654 aaKnown RBP15.33■□□□□ 0.04
SSR3-202ENST00000463503 POLKQ9UBT6 870 aa15.33■□□□□ 0.04
SSR3-202ENST00000463503 TNRC18O15417 2968 aaPredicted RBP15.33■□□□□ 0.04
SSR3-202ENST00000463503 THSD7BQ9C0I4 1608 aa15.32■□□□□ 0.04
SSR3-202ENST00000463503 SLX4Q8IY92 1834 aa15.32■□□□□ 0.04
SSR3-202ENST00000463503 BCORQ6W2J9 1755 aa15.31■□□□□ 0.04
SSR3-202ENST00000463503 FOXN1O15353 648 aa15.31■□□□□ 0.04
SSR3-202ENST00000463503 INTS5Q6P9B9 1019 aaKnown RBP15.31■□□□□ 0.04
SSR3-202ENST00000463503 PTCD1O75127 700 aaKnown RBP15.3■□□□□ 0.04
SSR3-202ENST00000463503 HSP90AB1P08238 724 aaKnown RBP15.3■□□□□ 0.04
SSR3-202ENST00000463503 SOS1Q07889 1333 aaPredicted RBP15.3■□□□□ 0.04
SSR3-202ENST00000463503 CREBZFQ9NS37 354 aa15.3■□□□□ 0.04
SSR3-202ENST00000463503 CNTNAP1P78357 1384 aa15.29■□□□□ 0.04
SSR3-202ENST00000463503 USPL1Q5W0Q7 1092 aa15.29■□□□□ 0.04
SSR3-202ENST00000463503 MKRN1Q9UHC7 482 aaKnown RBP15.29■□□□□ 0.04
SSR3-202ENST00000463503 SIPA1L3O60292 1781 aaPredicted RBP15.29■□□□□ 0.04
SSR3-202ENST00000463503 COL15A1P39059 1388 aa15.28■□□□□ 0.04
SSR3-202ENST00000463503 CABP4P57796 275 aa15.28■□□□□ 0.04
SSR3-202ENST00000463503 NFIXQ14938 502 aa15.28■□□□□ 0.04
SSR3-202ENST00000463503 ZNF530Q6P9A1 599 aaPredicted RBP15.28■□□□□ 0.04
SSR3-202ENST00000463503 POTEIP0CG38 1075 aa15.27■□□□□ 0.04
SSR3-202ENST00000463503 POTEJP0CG39 1038 aa15.27■□□□□ 0.04
SSR3-202ENST00000463503 PRDM10Q9NQV6 1147 aa15.27■□□□□ 0.04
SSR3-202ENST00000463503 CDCA8Q53HL2 280 aa15.26■□□□□ 0.03
SSR3-202ENST00000463503 TTLL6Q8N841 843 aa15.26■□□□□ 0.03
SSR3-202ENST00000463503 NFATC2IPQ8NCF5 419 aa15.26■□□□□ 0.03
SSR3-202ENST00000463503 BCL2L12Q9HB09 334 aa15.26■□□□□ 0.03
SSR3-202ENST00000463503 PASKQ96RG2 1323 aa15.25■□□□□ 0.03
SSR3-202ENST00000463503 PLEKHO1Q53GL0 409 aaPredicted RBP15.25■□□□□ 0.03
SSR3-202ENST00000463503 CHADLQ6NUI6 762 aa15.25■□□□□ 0.03
SSR3-202ENST00000463503 ZPR1O75312 459 aa15.24■□□□□ 0.03
SSR3-202ENST00000463503 AEBP1Q8IUX7 1158 aa15.24■□□□□ 0.03
SSR3-202ENST00000463503 DNAJC10Q8IXB1 793 aa15.24■□□□□ 0.03
SSR3-202ENST00000463503 NARFQ9UHQ1 456 aa15.24■□□□□ 0.03
SSR3-202ENST00000463503 MTHFSP49914 203 aa15.23■□□□□ 0.03
SSR3-202ENST00000463503 AMOTQ4VCS5 1084 aa15.23■□□□□ 0.03
SSR3-202ENST00000463503 C2CD5Q86YS7 1000 aa15.23■□□□□ 0.03
SSR3-202ENST00000463503 TRPM7Q96QT4 1865 aa15.23■□□□□ 0.03
SSR3-202ENST00000463503 SERPINB2P05120 415 aa15.22■□□□□ 0.03
SSR3-202ENST00000463503 CYP19A1P11511 503 aaPredicted RBP15.22■□□□□ 0.03
SSR3-202ENST00000463503 ZBTB1Q9Y2K1 713 aa15.22■□□□□ 0.03
SSR3-202ENST00000463503 LTBP3Q9NS15 1303 aa15.21■□□□□ 0.03
SSR3-202ENST00000463503 LTBP1Q14766 1721 aa15.21■□□□□ 0.03
SSR3-202ENST00000463503 CTCFP49711 727 aaPredicted RBP15.21■□□□□ 0.03
SSR3-202ENST00000463503 TNNT2P45379 298 aaPredicted RBP15.2■□□□□ 0.02
SSR3-202ENST00000463503 FAM161AQ3B820 660 aa15.2■□□□□ 0.02
SSR3-202ENST00000463503 ERFEQ4G0M1 354 aa15.2■□□□□ 0.02
SSR3-202ENST00000463503 C1orf141Q5JVX7 400 aa15.2■□□□□ 0.02
SSR3-202ENST00000463503 DPY19L2Q6NUT2 758 aa15.2■□□□□ 0.02
SSR3-202ENST00000463503 H0YIN7 160 aa15.19■□□□□ 0.02
SSR3-202ENST00000463503 VEGFBP49765 207 aa15.19■□□□□ 0.02
SSR3-202ENST00000463503 WBP1LQ9NX94 342 aa15.19■□□□□ 0.02
SSR3-202ENST00000463503 C21orf2O43822 256 aa15.18■□□□□ 0.02
SSR3-202ENST00000463503 DDNO94850 711 aaPredicted RBP15.18■□□□□ 0.02
SSR3-202ENST00000463503 ABHD8Q96I13 439 aa15.18■□□□□ 0.02
SSR3-202ENST00000463503 PDE4DIPQ5VU43 2346 aa15.17■□□□□ 0.02
SSR3-202ENST00000463503 LBX1P52954 281 aa15.17■□□□□ 0.02
SSR3-202ENST00000463503 LDHDQ86WU2 507 aa15.17■□□□□ 0.02
SSR3-202ENST00000463503 L3MBTL3Q96JM7 780 aaPredicted RBP15.17■□□□□ 0.02
SSR3-202ENST00000463503 TAOK3Q9H2K8 898 aa15.17■□□□□ 0.02
SSR3-202ENST00000463503 SLC52A2Q9HAB3 445 aa15.17■□□□□ 0.02
SSR3-202ENST00000463503 KIF7Q2M1P5 1343 aa15.17■□□□□ 0.02
SSR3-202ENST00000463503 ITGBL1O95965 494 aaPredicted RBP15.16■□□□□ 0.02
SSR3-202ENST00000463503 HSPA8P11142 646 aaKnown RBP15.16■□□□□ 0.02
SSR3-202ENST00000463503 AIDAQ96BJ3 306 aa15.16■□□□□ 0.02
SSR3-202ENST00000463503 SLC39A6Q13433 755 aa15.15■□□□□ 0.02
SSR3-202ENST00000463503 TAF1DQ9H5J8 278 aaPredicted RBP15.15■□□□□ 0.02
SSR3-202ENST00000463503 ZNF219Q9P2Y4 722 aaPredicted RBP15.15■□□□□ 0.02
SSR3-202ENST00000463503 ZNF316A6NFI3 1004 aaPredicted RBP15.14■□□□□ 0.01
SSR3-202ENST00000463503 TMEM88BA6NKF7 163 aa15.14■□□□□ 0.01
SSR3-202ENST00000463503 TBC1D9BQ66K14 1250 aa15.14■□□□□ 0.01
SSR3-202ENST00000463503 SULT6B1Q6IMI4 303 aa15.14■□□□□ 0.01
SSR3-202ENST00000463503 PRR5LQ6MZQ0 368 aa15.14■□□□□ 0.01
SSR3-202ENST00000463503 ZNF622Q969S3 477 aaKnown RBP eCLIP15.14■□□□□ 0.01
SSR3-202ENST00000463503 BRIP1Q9BX63 1249 aa15.14■□□□□ 0.01
SSR3-202ENST00000463503 LGR6Q9HBX8 967 aa15.14■□□□□ 0.01
SSR3-202ENST00000463503 IQCA1LA6NCM1 817 aa15.13■□□□□ 0.01
SSR3-202ENST00000463503 RASSF10A6NK89 507 aa15.13■□□□□ 0.01
SSR3-202ENST00000463503 EIF5P55010 431 aaKnown RBP15.13■□□□□ 0.01
SSR3-202ENST00000463503 AKAP4Q5JQC9 854 aa15.13■□□□□ 0.01
SSR3-202ENST00000463503 BICDL1Q6ZP65 573 aa15.13■□□□□ 0.01
SSR3-202ENST00000463503 CASP8AP2Q9UKL3 1982 aa15.13■□□□□ 0.01
SSR3-202ENST00000463503 PDE6BP35913 854 aa15.12■□□□□ 0.01
SSR3-202ENST00000463503 PRPF40BQ6NWY9 871 aaKnown RBP15.12■□□□□ 0.01
SSR3-202ENST00000463503 VSIG10Q8N0Z9 540 aa15.12■□□□□ 0.01
SSR3-202ENST00000463503 CCDC24Q8N4L8 307 aa15.12■□□□□ 0.01
SSR3-202ENST00000463503 PDZRN3Q9UPQ7 1066 aa15.12■□□□□ 0.01
SSR3-202ENST00000463503 ZNF541Q9H0D2 1346 aa15.12■□□□□ 0.01
SSR3-202ENST00000463503 PCDH10Q9P2E7 1040 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms