RNA–Protein interactions for RNA: ENST00000463246.5

NECAB3-204, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 3

Gene NECAB3, Length 766 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-204ENST00000463246 VSIG10Q8N0Z9 540 aa22.15■■□□□ 1.14
NECAB3-204ENST00000463246 BRCA1P38398 1863 aaKnown RBP22.15■■□□□ 1.14
NECAB3-204ENST00000463246 CEMIPQ8WUJ3 1361 aa22.14■■□□□ 1.14
NECAB3-204ENST00000463246 U2AF1L5P0DN76 240 aaPredicted RBP22.14■■□□□ 1.13
NECAB3-204ENST00000463246 U2AF1Q01081 240 aaKnown RBP eCLIP22.14■■□□□ 1.132e-6■■□□□ 12.5
NECAB3-204ENST00000463246 TEFQ10587 303 aa22.14■■□□□ 1.13
NECAB3-204ENST00000463246 ZBTB1Q9Y2K1 713 aa22.14■■□□□ 1.13
NECAB3-204ENST00000463246 ZNF496Q96IT1 587 aaPredicted RBP22.13■■□□□ 1.13
NECAB3-204ENST00000463246 DDR1Q08345 913 aa22.12■■□□□ 1.13
NECAB3-204ENST00000463246 ZNF790Q6PG37 636 aa22.12■■□□□ 1.13
NECAB3-204ENST00000463246 TTC5Q8N0Z6 440 aa22.12■■□□□ 1.13
NECAB3-204ENST00000463246 COL15A1P39059 1388 aa22.12■■□□□ 1.13
NECAB3-204ENST00000463246 PIM2Q9P1W9 311 aa22.11■■□□□ 1.13
NECAB3-204ENST00000463246 HEG1Q9ULI3 1381 aa22.11■■□□□ 1.13
NECAB3-204ENST00000463246 AFDNP55196 1824 aaKnown RBP22.1■■□□□ 1.13
NECAB3-204ENST00000463246 HSPA6P17066 643 aa22.1■■□□□ 1.13
NECAB3-204ENST00000463246 USPL1Q5W0Q7 1092 aa22.1■■□□□ 1.13
NECAB3-204ENST00000463246 TM4SF1P30408 202 aa22.09■■□□□ 1.13
NECAB3-204ENST00000463246 DALRD3Q5D0E6 543 aaKnown RBP22.09■■□□□ 1.13
NECAB3-204ENST00000463246 DLG5Q8TDM6 1919 aa22.09■■□□□ 1.13
NECAB3-204ENST00000463246 ARFGEF1Q9Y6D6 1849 aa22.08■■□□□ 1.13
NECAB3-204ENST00000463246 KCNQ3O43525 872 aa22.08■■□□□ 1.13
NECAB3-204ENST00000463246 NARFQ9UHQ1 456 aa22.08■■□□□ 1.13
NECAB3-204ENST00000463246 NRXN2Q9P2S2 1712 aa22.07■■□□□ 1.12
NECAB3-204ENST00000463246 POLRMTO00411 1230 aaKnown RBP22.07■■□□□ 1.12
NECAB3-204ENST00000463246 KIF3CO14782 793 aa22.07■■□□□ 1.12
NECAB3-204ENST00000463246 CANXP27824 592 aaKnown RBP22.07■■□□□ 1.12
NECAB3-204ENST00000463246 BCL2L12Q9HB09 334 aa22.07■■□□□ 1.12
NECAB3-204ENST00000463246 STARD3NLO95772 234 aa22.06■■□□□ 1.12
NECAB3-204ENST00000463246 KCNA3P22001 575 aa22.06■■□□□ 1.12
NECAB3-204ENST00000463246 CHRNA5P30532 468 aa22.06■■□□□ 1.12
NECAB3-204ENST00000463246 BTBD11A6QL63 1104 aa22.05■■□□□ 1.12
NECAB3-204ENST00000463246 EIF5P55010 431 aaKnown RBP22.05■■□□□ 1.12
NECAB3-204ENST00000463246 C9orf131Q5VYM1 1079 aa22.05■■□□□ 1.12
NECAB3-204ENST00000463246 MCM10Q7L590 875 aa22.05■■□□□ 1.12
NECAB3-204ENST00000463246 DCTN1Q14203 1278 aa22.04■■□□□ 1.12
NECAB3-204ENST00000463246 NFIXQ14938 502 aa22.04■■□□□ 1.12
NECAB3-204ENST00000463246 FMNL2Q96PY5 1086 aa22.04■■□□□ 1.12
NECAB3-204ENST00000463246 SCN7AQ01118 1682 aa22.04■■□□□ 1.12
NECAB3-204ENST00000463246 RTF1Q92541 710 aaKnown RBP22.03■■□□□ 1.12
NECAB3-204ENST00000463246 TEX13AQ9BXU3 409 aaPredicted RBP22.03■■□□□ 1.12
NECAB3-204ENST00000463246 RNF181Q9P0P0 153 aa22.02■■□□□ 1.12
NECAB3-204ENST00000463246 HTATSF1O43719 755 aaKnown RBP22.01■■□□□ 1.11
NECAB3-204ENST00000463246 C16orf71Q8IYS4 520 aaPredicted RBP22.01■■□□□ 1.11
NECAB3-204ENST00000463246 NMRK2Q9NPI5 230 aa22.01■■□□□ 1.11
NECAB3-204ENST00000463246 ZNF330Q9Y3S2 320 aaPredicted RBP22.01■■□□□ 1.11
NECAB3-204ENST00000463246 TOMM70O94826 608 aa22■■□□□ 1.11
NECAB3-204ENST00000463246 A1BGP04217 495 aa22■■□□□ 1.11
NECAB3-204ENST00000463246 A0A087WZG4 1122 aa21.99■■□□□ 1.11
NECAB3-204ENST00000463246 SERPINB2P05120 415 aa21.99■■□□□ 1.11
NECAB3-204ENST00000463246 BICDL1Q6ZP65 573 aa21.99■■□□□ 1.11
NECAB3-204ENST00000463246 NPM2Q86SE8 214 aaKnown RBP21.99■■□□□ 1.11
NECAB3-204ENST00000463246 PLEKHF1Q96S99 279 aa21.99■■□□□ 1.11
NECAB3-204ENST00000463246 BCORQ6W2J9 1755 aa21.98■■□□□ 1.11
NECAB3-204ENST00000463246 DLEC1Q9Y238 1755 aa21.98■■□□□ 1.11
NECAB3-204ENST00000463246 PRAMEF22A3QJZ6 481 aa21.98■■□□□ 1.11
NECAB3-204ENST00000463246 IL6STP40189 918 aaPredicted RBP21.98■■□□□ 1.11
NECAB3-204ENST00000463246 USP16Q9Y5T5 823 aa21.98■■□□□ 1.11
NECAB3-204ENST00000463246 KDM2BQ8NHM5 1336 aa21.98■■□□□ 1.11
NECAB3-204ENST00000463246 TBC1D2BQ9UPU7 963 aa21.97■■□□□ 1.11
NECAB3-204ENST00000463246 KDM3BQ7LBC6 1761 aa21.97■■□□□ 1.11
NECAB3-204ENST00000463246 APLP1P51693 650 aa21.96■■□□□ 1.11
NECAB3-204ENST00000463246 ANKRD31Q8N7Z5 1873 aa21.96■■□□□ 1.11
NECAB3-204ENST00000463246 PIP4K2AP48426 406 aaPredicted RBP21.95■■□□□ 1.1
NECAB3-204ENST00000463246 DDX10Q13206 875 aaKnown RBP21.95■■□□□ 1.1
NECAB3-204ENST00000463246 TBC1D9BQ66K14 1250 aa21.95■■□□□ 1.1
NECAB3-204ENST00000463246 CARMIL3Q8ND23 1372 aa21.95■■□□□ 1.1
NECAB3-204ENST00000463246 NPHP1O15259 732 aa21.94■■□□□ 1.1
NECAB3-204ENST00000463246 SNRPA1P09661 255 aaKnown RBP21.94■■□□□ 1.1
NECAB3-204ENST00000463246 RASSF7Q02833 373 aa21.94■■□□□ 1.1
NECAB3-204ENST00000463246 RALBP1Q15311 655 aa21.94■■□□□ 1.1
NECAB3-204ENST00000463246 TAF7Q15545 349 aaPredicted RBP21.94■■□□□ 1.1
NECAB3-204ENST00000463246 C2CD5Q86YS7 1000 aa21.94■■□□□ 1.1
NECAB3-204ENST00000463246 MIS18AQ9NYP9 233 aa21.94■■□□□ 1.1
NECAB3-204ENST00000463246 LAMB4A4D0S4 1761 aa21.94■■□□□ 1.1
NECAB3-204ENST00000463246 H0YIN7 160 aa21.93■■□□□ 1.1
NECAB3-204ENST00000463246 SBF1O95248 1867 aa21.93■■□□□ 1.1
NECAB3-204ENST00000463246 NFE2L2Q16236 605 aa21.93■■□□□ 1.1
NECAB3-204ENST00000463246 TTLL6Q8N841 843 aa21.93■■□□□ 1.1
NECAB3-204ENST00000463246 TNRC6CQ9HCJ0 1690 aaKnown RBP21.93■■□□□ 1.1
NECAB3-204ENST00000463246 CAMTA2O94983 1202 aa21.92■■□□□ 1.1
NECAB3-204ENST00000463246 NEFMP07197 916 aa21.92■■□□□ 1.1
NECAB3-204ENST00000463246 RBM46Q8TBY0 533 aaKnown RBP21.92■■□□□ 1.1
NECAB3-204ENST00000463246 THUMPD2Q9BTF0 503 aaKnown RBP21.9■■□□□ 1.1
NECAB3-204ENST00000463246 COL11A2P13942 1736 aaPredicted RBP21.89■■□□□ 1.1
NECAB3-204ENST00000463246 ZC3H4Q9UPT8 1303 aaKnown RBP21.89■■□□□ 1.1
NECAB3-204ENST00000463246 NBPF26B4DH59 902 aa21.89■■□□□ 1.09
NECAB3-204ENST00000463246 LMNB1P20700 586 aa21.89■■□□□ 1.09
NECAB3-204ENST00000463246 NBPF10Q6P3W6 841 aaKnown RBP21.89■■□□□ 1.09
NECAB3-204ENST00000463246 DZIP3Q86Y13 1208 aaKnown RBP21.89■■□□□ 1.09
NECAB3-204ENST00000463246 NBPF15Q8N660 670 aa21.89■■□□□ 1.09
NECAB3-204ENST00000463246 ZNF622Q969S3 477 aaKnown RBP eCLIP21.88■■□□□ 1.091e-6■■□□□ 14.2
NECAB3-204ENST00000463246 PNNQ9H307 717 aaKnown RBP21.88■■□□□ 1.09
NECAB3-204ENST00000463246 RRAGCQ9HB90 399 aa21.88■■□□□ 1.09
NECAB3-204ENST00000463246 MAPK8IP3Q9UPT6 1336 aa21.87■■□□□ 1.09
NECAB3-204ENST00000463246 TIAM2Q8IVF5 1701 aa21.87■■□□□ 1.09
NECAB3-204ENST00000463246 PDE6BP35913 854 aa21.87■■□□□ 1.09
NECAB3-204ENST00000463246 PRR5LQ6MZQ0 368 aa21.87■■□□□ 1.09
NECAB3-204ENST00000463246 CCDC24Q8N4L8 307 aa21.87■■□□□ 1.09
NECAB3-204ENST00000463246 WDR90Q96KV7 1748 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms