RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 CHRNA5P30532 468 aa26.76■■□□□ 1.87
VARS-221ENST00000463184 NMRK2Q9NPI5 230 aa26.76■■□□□ 1.87
VARS-221ENST00000463184 CC2D1BQ5T0F9 858 aaKnown RBP26.75■■□□□ 1.87
VARS-221ENST00000463184 ZBTB1Q9Y2K1 713 aa26.74■■□□□ 1.87
VARS-221ENST00000463184 COL15A1P39059 1388 aa26.73■■□□□ 1.87
VARS-221ENST00000463184 NFIXQ14938 502 aa26.73■■□□□ 1.87
VARS-221ENST00000463184 KCPQ6ZWJ8 1503 aa26.73■■□□□ 1.87
VARS-221ENST00000463184 RNF181Q9P0P0 153 aa26.71■■□□□ 1.87
VARS-221ENST00000463184 KDM2BQ8NHM5 1336 aa26.7■■□□□ 1.87
VARS-221ENST00000463184 C16orf71Q8IYS4 520 aaPredicted RBP26.7■■□□□ 1.86
VARS-221ENST00000463184 TTC5Q8N0Z6 440 aa26.7■■□□□ 1.86
VARS-221ENST00000463184 RBM46Q8TBY0 533 aaKnown RBP26.7■■□□□ 1.86
VARS-221ENST00000463184 VIRMAQ69YN4 1812 aaKnown RBP26.69■■□□□ 1.86
VARS-221ENST00000463184 BCL2L12Q9HB09 334 aa26.69■■□□□ 1.86
VARS-221ENST00000463184 STARD3NLO95772 234 aa26.68■■□□□ 1.86
VARS-221ENST00000463184 SERPINB2P05120 415 aa26.68■■□□□ 1.86
VARS-221ENST00000463184 NPC1L1Q9UHC9 1359 aa26.68■■□□□ 1.86
VARS-221ENST00000463184 CANXP27824 592 aaKnown RBP26.67■■□□□ 1.86
VARS-221ENST00000463184 A0A087WZG4 1122 aa26.66■■□□□ 1.86
VARS-221ENST00000463184 DNAJC5GQ8N7S2 189 aa26.66■■□□□ 1.86
VARS-221ENST00000463184 GAS2L2Q8NHY3 880 aa26.66■■□□□ 1.86
VARS-221ENST00000463184 EIF5P55010 431 aaKnown RBP26.65■■□□□ 1.86
VARS-221ENST00000463184 TEX13AQ9BXU3 409 aaPredicted RBP26.65■■□□□ 1.86
VARS-221ENST00000463184 AFDNP55196 1824 aaKnown RBP26.65■■□□□ 1.86
VARS-221ENST00000463184 NRXN2Q9P2S2 1712 aa26.65■■□□□ 1.86
VARS-221ENST00000463184 GNAT3A8MTJ3 354 aa26.64■■□□□ 1.86
VARS-221ENST00000463184 U2SURPO15042 1029 aaKnown RBP26.64■■□□□ 1.86
VARS-221ENST00000463184 TEFQ10587 303 aa26.64■■□□□ 1.86
VARS-221ENST00000463184 FSTL1Q12841 308 aa26.64■■□□□ 1.86
VARS-221ENST00000463184 UBR2Q8IWV8 1755 aa26.63■■□□□ 1.85
VARS-221ENST00000463184 ZNF790Q6PG37 636 aa26.63■■□□□ 1.85
VARS-221ENST00000463184 TTLL6Q8N841 843 aa26.63■■□□□ 1.85
VARS-221ENST00000463184 IL17REQ8NFR9 667 aa26.63■■□□□ 1.85
VARS-221ENST00000463184 RRAGCQ9HB90 399 aa26.63■■□□□ 1.85
VARS-221ENST00000463184 ZC3H4Q9UPT8 1303 aaKnown RBP26.63■■□□□ 1.85
VARS-221ENST00000463184 COL3A1P02461 1466 aaPredicted RBP26.62■■□□□ 1.85
VARS-221ENST00000463184 SBF1O95248 1867 aa26.62■■□□□ 1.85
VARS-221ENST00000463184 ZNF496Q96IT1 587 aaPredicted RBP26.62■■□□□ 1.85
VARS-221ENST00000463184 HEG1Q9ULI3 1381 aa26.61■■□□□ 1.85
VARS-221ENST00000463184 H0YIN7 160 aa26.61■■□□□ 1.85
VARS-221ENST00000463184 C2CD5Q86YS7 1000 aa26.61■■□□□ 1.85
VARS-221ENST00000463184 LMNB1P20700 586 aa26.6■■□□□ 1.85
VARS-221ENST00000463184 RASSF7Q02833 373 aa26.6■■□□□ 1.85
VARS-221ENST00000463184 BICDL1Q6ZP65 573 aa26.6■■□□□ 1.85
VARS-221ENST00000463184 CNGB1Q14028 1251 aaPredicted RBP26.58■■□□□ 1.85
VARS-221ENST00000463184 PDZRN3Q9UPQ7 1066 aa26.58■■□□□ 1.85
VARS-221ENST00000463184 IL6STP40189 918 aaPredicted RBP26.57■■□□□ 1.84
VARS-221ENST00000463184 TBC1D9BQ66K14 1250 aa26.57■■□□□ 1.84
VARS-221ENST00000463184 FMNL2Q96PY5 1086 aa26.57■■□□□ 1.84
VARS-221ENST00000463184 DLEC1Q9Y238 1755 aa26.56■■□□□ 1.84
VARS-221ENST00000463184 TNRC6CQ9HCJ0 1690 aaKnown RBP26.55■■□□□ 1.84
VARS-221ENST00000463184 NPM2Q86SE8 214 aaKnown RBP26.55■■□□□ 1.84
VARS-221ENST00000463184 TBC1D2BQ9UPU7 963 aa26.55■■□□□ 1.84
VARS-221ENST00000463184 CARMIL3Q8ND23 1372 aa26.55■■□□□ 1.84
VARS-221ENST00000463184 GLTPD2A6NH11 291 aa26.54■■□□□ 1.84
VARS-221ENST00000463184 PDE6BP35913 854 aa26.54■■□□□ 1.84
VARS-221ENST00000463184 SMC1BQ8NDV3 1235 aa26.54■■□□□ 1.84
VARS-221ENST00000463184 BRIP1Q9BX63 1249 aa26.54■■□□□ 1.84
VARS-221ENST00000463184 ZNF330Q9Y3S2 320 aaPredicted RBP26.54■■□□□ 1.84
VARS-221ENST00000463184 CEMIPQ8WUJ3 1361 aa26.54■■□□□ 1.84
VARS-221ENST00000463184 WDR90Q96KV7 1748 aa26.53■■□□□ 1.84
VARS-221ENST00000463184 PRELPP51888 382 aa26.53■■□□□ 1.84
VARS-221ENST00000463184 CFAP53Q96M91 514 aa26.53■■□□□ 1.84
VARS-221ENST00000463184 BTBD11A6QL63 1104 aa26.52■■□□□ 1.84
VARS-221ENST00000463184 KLRG1Q96E93 195 aa26.52■■□□□ 1.84
VARS-221ENST00000463184 SIPA1L3O60292 1781 aaPredicted RBP26.51■■□□□ 1.83
VARS-221ENST00000463184 A1BGP04217 495 aa26.51■■□□□ 1.83
VARS-221ENST00000463184 VEGFAP15692 232 aaPredicted RBP26.51■■□□□ 1.83
VARS-221ENST00000463184 PRKAR2BP31323 418 aa26.51■■□□□ 1.83
VARS-221ENST00000463184 ZNF622Q969S3 477 aaKnown RBP eCLIP26.51■■□□□ 1.83
VARS-221ENST00000463184 PHACTR3Q96KR7 559 aa26.51■■□□□ 1.83
VARS-221ENST00000463184 NFKBIEO00221 500 aa26.5■■□□□ 1.83
VARS-221ENST00000463184 PRR5LQ6MZQ0 368 aa26.5■■□□□ 1.83
VARS-221ENST00000463184 SETDB2Q96T68 719 aa26.5■■□□□ 1.83
VARS-221ENST00000463184 RSPH6AQ9H0K4 717 aa26.5■■□□□ 1.83
VARS-221ENST00000463184 NUDCQ9Y266 331 aa26.5■■□□□ 1.83
VARS-221ENST00000463184 HTRA3P83110 453 aa26.49■■□□□ 1.83
VARS-221ENST00000463184 KCNQ3O43525 872 aa26.48■■□□□ 1.83
VARS-221ENST00000463184 CAMTA2O94983 1202 aa26.48■■□□□ 1.83
VARS-221ENST00000463184 SCN7AQ01118 1682 aa26.47■■□□□ 1.83
VARS-221ENST00000463184 JMYQ8N9B5 988 aa26.47■■□□□ 1.83
VARS-221ENST00000463184 DPY19L2Q6NUT2 758 aa26.46■■□□□ 1.83
VARS-221ENST00000463184 CCDC24Q8N4L8 307 aa26.46■■□□□ 1.83
VARS-221ENST00000463184 CNBD1Q8NA66 436 aa26.46■■□□□ 1.83
VARS-221ENST00000463184 ANKRD31Q8N7Z5 1873 aa26.45■■□□□ 1.83
VARS-221ENST00000463184 NPHP1O15259 732 aa26.45■■□□□ 1.82
VARS-221ENST00000463184 C21orf2O43822 256 aa26.45■■□□□ 1.82
VARS-221ENST00000463184 DZIP3Q86Y13 1208 aaKnown RBP26.45■■□□□ 1.82
VARS-221ENST00000463184 USP16Q9Y5T5 823 aa26.45■■□□□ 1.82
VARS-221ENST00000463184 ST5P78524 1137 aa26.44■■□□□ 1.82
VARS-221ENST00000463184 RTF1Q92541 710 aaKnown RBP26.44■■□□□ 1.82
VARS-221ENST00000463184 CNKSR1Q969H4 720 aa26.44■■□□□ 1.82
VARS-221ENST00000463184 CCDC88AQ3V6T2 1871 aa26.44■■□□□ 1.82
VARS-221ENST00000463184 SNRPA1P09661 255 aaKnown RBP26.42■■□□□ 1.82
VARS-221ENST00000463184 U2AF1L5P0DN76 240 aaPredicted RBP26.42■■□□□ 1.82
VARS-221ENST00000463184 U2AF1Q01081 240 aaKnown RBP eCLIP26.42■■□□□ 1.82
VARS-221ENST00000463184 ERFEQ4G0M1 354 aa26.42■■□□□ 1.82
VARS-221ENST00000463184 STYK1Q6J9G0 422 aa26.42■■□□□ 1.82
VARS-221ENST00000463184 CLEC4GQ6UXB4 293 aa26.42■■□□□ 1.82
VARS-221ENST00000463184 ZNF219Q9P2Y4 722 aaPredicted RBP26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms