RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 SOX12O15370 315 aa4.23□□□□□ -1.73
COL8A1-204ENST00000462604 IGSF3O75054 1194 aa4.23□□□□□ -1.73
COL8A1-204ENST00000462604 PLEKHG5O94827 1062 aa4.23□□□□□ -1.73
COL8A1-204ENST00000462604 ZSCAN22P10073 491 aaPredicted RBP4.23□□□□□ -1.73
COL8A1-204ENST00000462604 HSPA4P34932 840 aa4.23□□□□□ -1.73
COL8A1-204ENST00000462604 UBE2HP62256 183 aa4.23□□□□□ -1.73
COL8A1-204ENST00000462604 RBM10P98175 930 aaKnown RBP4.23□□□□□ -1.73
COL8A1-204ENST00000462604 MLECQ14165 292 aa4.23□□□□□ -1.73
COL8A1-204ENST00000462604 MTHFSDQ2M296 383 aaKnown RBP4.23□□□□□ -1.73
COL8A1-204ENST00000462604 HSP90AB2PQ58FF8 381 aa4.23□□□□□ -1.73
COL8A1-204ENST00000462604 DNTTIP2Q5QJE6 756 aaKnown RBP4.23□□□□□ -1.73
COL8A1-204ENST00000462604 USP48Q86UV5 1035 aa4.23□□□□□ -1.73
COL8A1-204ENST00000462604 RUFY2Q8WXA3 655 aa4.23□□□□□ -1.73
COL8A1-204ENST00000462604 PRIMPOLQ96LW4 560 aa4.23□□□□□ -1.73
COL8A1-204ENST00000462604 UPF3BQ9BZI7 483 aaKnown RBP4.23□□□□□ -1.73
COL8A1-204ENST00000462604 MIS18AQ9NYP9 233 aa4.23□□□□□ -1.73
COL8A1-204ENST00000462604 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.23□□□□□ -1.73
COL8A1-204ENST00000462604 PALD1Q9ULE6 856 aa4.23□□□□□ -1.73
COL8A1-204ENST00000462604 SMC3Q9UQE7 1217 aa4.23□□□□□ -1.73
COL8A1-204ENST00000462604 LRRFIP2Q9Y608 721 aaKnown RBP4.23□□□□□ -1.73
COL8A1-204ENST00000462604 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.23□□□□□ -1.73
COL8A1-204ENST00000462604 KDRP35968 1356 aa4.23□□□□□ -1.73
COL8A1-204ENST00000462604 MAP3K5Q99683 1374 aa4.23□□□□□ -1.73
COL8A1-204ENST00000462604 ROBO2Q9HCK4 1378 aa4.23□□□□□ -1.73
COL8A1-204ENST00000462604 TMEM2Q9UHN6 1383 aa4.23□□□□□ -1.73
COL8A1-204ENST00000462604 PLEKHG1Q9ULL1 1385 aa4.23□□□□□ -1.73
COL8A1-204ENST00000462604 PTPRUQ92729 1446 aa4.22□□□□□ -1.73
COL8A1-204ENST00000462604 PNMA6EA0A0J9YXQ4 647 aa4.22□□□□□ -1.73
COL8A1-204ENST00000462604 GNAT3A8MTJ3 354 aa4.22□□□□□ -1.73
COL8A1-204ENST00000462604 GOLGA6L6A8MZA4 724 aa4.22□□□□□ -1.73
COL8A1-204ENST00000462604 SGSM2O43147 1006 aa4.22□□□□□ -1.73
COL8A1-204ENST00000462604 FOXO3O43524 673 aa4.22□□□□□ -1.73
COL8A1-204ENST00000462604 STX6O43752 255 aa4.22□□□□□ -1.73
COL8A1-204ENST00000462604 PDIA4P13667 645 aaKnown RBP4.22□□□□□ -1.73
COL8A1-204ENST00000462604 FAM69CQ0P6D2 419 aa4.22□□□□□ -1.73
COL8A1-204ENST00000462604 CHAF1AQ13111 956 aaPredicted RBP4.22□□□□□ -1.73
COL8A1-204ENST00000462604 OS9Q13438 667 aaPredicted RBP4.22□□□□□ -1.73
COL8A1-204ENST00000462604 HDGFL1Q5TGJ6 251 aa4.22□□□□□ -1.73
COL8A1-204ENST00000462604 ERC1Q8IUD2 1116 aa4.22□□□□□ -1.73
COL8A1-204ENST00000462604 NGDNQ8NEJ9 315 aaKnown RBP4.22□□□□□ -1.73
COL8A1-204ENST00000462604 SSH3Q8TE77 659 aa4.22□□□□□ -1.73
COL8A1-204ENST00000462604 PIBF1Q8WXW3 757 aa4.22□□□□□ -1.73
COL8A1-204ENST00000462604 KIF1BPQ96EK5 621 aa4.22□□□□□ -1.73
COL8A1-204ENST00000462604 ZSCAN31Q96LW9 406 aaPredicted RBP4.22□□□□□ -1.73
COL8A1-204ENST00000462604 SH2B1Q9NRF2 756 aaPredicted RBP4.22□□□□□ -1.73
COL8A1-204ENST00000462604 DIAPH3Q9NSV4 1193 aa4.22□□□□□ -1.73
COL8A1-204ENST00000462604 NSFL1CQ9UNZ2 370 aaKnown RBP4.22□□□□□ -1.73
COL8A1-204ENST00000462604 LIMCH1Q9UPQ0 1083 aa4.22□□□□□ -1.73
COL8A1-204ENST00000462604 HDAC5Q9UQL6 1122 aa4.22□□□□□ -1.73
COL8A1-204ENST00000462604 CCDC9Q9Y3X0 531 aaKnown RBP4.22□□□□□ -1.73
COL8A1-204ENST00000462604 RPAP1Q9BWH6 1393 aaPredicted RBP4.22□□□□□ -1.73
COL8A1-204ENST00000462604 TTC41PQ6P2S7 1318 aa4.21□□□□□ -1.73
COL8A1-204ENST00000462604 USP42Q9H9J4 1324 aaKnown RBP4.21□□□□□ -1.73
COL8A1-204ENST00000462604 HIP1O00291 1037 aa4.21□□□□□ -1.74
COL8A1-204ENST00000462604 SRGAP3O43295 1099 aa4.21□□□□□ -1.74
COL8A1-204ENST00000462604 FIBPO43427 364 aa4.21□□□□□ -1.74
COL8A1-204ENST00000462604 GADD45BO75293 160 aaPredicted RBP4.21□□□□□ -1.74
COL8A1-204ENST00000462604 SURF6O75683 361 aaKnown RBP4.21□□□□□ -1.74
COL8A1-204ENST00000462604 GLRX3O76003 335 aaKnown RBP4.21□□□□□ -1.74
COL8A1-204ENST00000462604 ADCY5O95622 1261 aa4.21□□□□□ -1.74
COL8A1-204ENST00000462604 F13A1P00488 732 aa4.21□□□□□ -1.74
COL8A1-204ENST00000462604 HOXB7P09629 217 aa4.21□□□□□ -1.74
COL8A1-204ENST00000462604 CCDC192P0DO97 292 aa4.21□□□□□ -1.74
COL8A1-204ENST00000462604 ZKSCAN1P17029 563 aaPredicted RBP4.21□□□□□ -1.74
COL8A1-204ENST00000462604 HOXD11P31277 338 aaPredicted RBP4.21□□□□□ -1.74
COL8A1-204ENST00000462604 AK2P54819 239 aa4.21□□□□□ -1.74
COL8A1-204ENST00000462604 POLA2Q14181 598 aa4.21□□□□□ -1.74
COL8A1-204ENST00000462604 TAF7Q15545 349 aaPredicted RBP4.21□□□□□ -1.74
COL8A1-204ENST00000462604 FOXD4L6Q3SYB3 417 aaPredicted RBP4.21□□□□□ -1.74
COL8A1-204ENST00000462604 FOXD4L3Q6VB84 417 aaPredicted RBP4.21□□□□□ -1.74
COL8A1-204ENST00000462604 NUTM1Q86Y26 1132 aa4.21□□□□□ -1.74
COL8A1-204ENST00000462604 UNC5CLQ8IV45 518 aa4.21□□□□□ -1.74
COL8A1-204ENST00000462604 MYRIPQ8NFW9 859 aa4.21□□□□□ -1.74
COL8A1-204ENST00000462604 PI4K2BQ8TCG2 481 aa4.21□□□□□ -1.74
COL8A1-204ENST00000462604 RHPN1Q8TCX5 695 aa4.21□□□□□ -1.74
COL8A1-204ENST00000462604 CHAMP1Q96JM3 812 aa4.21□□□□□ -1.74
COL8A1-204ENST00000462604 TTC14Q96N46 770 aa4.21□□□□□ -1.74
COL8A1-204ENST00000462604 EYA1Q99502 592 aa4.21□□□□□ -1.74
COL8A1-204ENST00000462604 LSG1Q9H089 658 aaKnown RBP4.21□□□□□ -1.74
COL8A1-204ENST00000462604 GDPD2Q9HCC8 539 aa4.21□□□□□ -1.74
COL8A1-204ENST00000462604 IL1RAPL2Q9NP60 686 aa4.21□□□□□ -1.74
COL8A1-204ENST00000462604 PDRG1Q9NUG6 133 aa4.21□□□□□ -1.74
COL8A1-204ENST00000462604 USP25Q9UHP3 1055 aa4.21□□□□□ -1.74
COL8A1-204ENST00000462604 CNPY2Q9Y2B0 182 aa4.21□□□□□ -1.74
COL8A1-204ENST00000462604 SNX14Q9Y5W7 946 aa4.21□□□□□ -1.74
COL8A1-204ENST00000462604 CYP46A1Q9Y6A2 500 aa4.21□□□□□ -1.74
COL8A1-204ENST00000462604 EID1Q9Y6B2 187 aa4.21□□□□□ -1.74
COL8A1-204ENST00000462604 C3P01024 1663 aa4.21□□□□□ -1.74
COL8A1-204ENST00000462604 MON2Q7Z3U7 1717 aa4.21□□□□□ -1.74
COL8A1-204ENST00000462604 NRXN3Q9Y4C0 1643 aa4.21□□□□□ -1.74
COL8A1-204ENST00000462604 ADAMTS13Q76LX8 1427 aa4.21□□□□□ -1.74
COL8A1-204ENST00000462604 NUTM2FA1L443 756 aa4.2□□□□□ -1.74
COL8A1-204ENST00000462604 KDM4AO75164 1064 aa4.2□□□□□ -1.74
COL8A1-204ENST00000462604 MAP4K4O95819 1239 aaPredicted RBP4.2□□□□□ -1.74
COL8A1-204ENST00000462604 IFIT2P09913 472 aaKnown RBP4.2□□□□□ -1.74
COL8A1-204ENST00000462604 CASTP20810 708 aaKnown RBP4.2□□□□□ -1.74
COL8A1-204ENST00000462604 PDCP20941 246 aa4.2□□□□□ -1.74
COL8A1-204ENST00000462604 SYT1P21579 422 aa4.2□□□□□ -1.74
COL8A1-204ENST00000462604 PSMA5P28066 241 aa4.2□□□□□ -1.74
COL8A1-204ENST00000462604 KCNJ4P48050 445 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms