RNA–Protein interactions for RNA: ENST00000462264.3

RN7SL39P-201, Transcript of RNA, 7SL, cytoplasmic 39, pseudogene, humanhuman

BASIC

Gene RN7SL39P, Length 297 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL39P-201ENST00000462264 NUP98P52948 1817 aa8.61□□□□□ -1.03
RN7SL39P-201ENST00000462264 USP42Q9H9J4 1324 aaKnown RBP8.61□□□□□ -1.03
RN7SL39P-201ENST00000462264 BTBD11A6QL63 1104 aa8.61□□□□□ -1.03
RN7SL39P-201ENST00000462264 NEFMP07197 916 aa8.61□□□□□ -1.03
RN7SL39P-201ENST00000462264 GYS1P13807 737 aa8.61□□□□□ -1.03
RN7SL39P-201ENST00000462264 CANXP27824 592 aaKnown RBP8.61□□□□□ -1.03
RN7SL39P-201ENST00000462264 INTS5Q6P9B9 1019 aaKnown RBP8.61□□□□□ -1.03
RN7SL39P-201ENST00000462264 CD2APQ9Y5K6 639 aa8.61□□□□□ -1.03
RN7SL39P-201ENST00000462264 CEMIPQ8WUJ3 1361 aa8.61□□□□□ -1.03
RN7SL39P-201ENST00000462264 HEG1Q9ULI3 1381 aa8.61□□□□□ -1.03
RN7SL39P-201ENST00000462264 SOS1Q07889 1333 aaPredicted RBP8.6□□□□□ -1.03
RN7SL39P-201ENST00000462264 MAPK8IP3Q9UPT6 1336 aa8.6□□□□□ -1.03
RN7SL39P-201ENST00000462264 KCNQ3O43525 872 aa8.6□□□□□ -1.03
RN7SL39P-201ENST00000462264 FCHSD2O94868 740 aa8.6□□□□□ -1.03
RN7SL39P-201ENST00000462264 CYP19A1P11511 503 aaPredicted RBP8.6□□□□□ -1.03
RN7SL39P-201ENST00000462264 USPL1Q5W0Q7 1092 aa8.6□□□□□ -1.03
RN7SL39P-201ENST00000462264 ZNF790Q6PG37 636 aa8.6□□□□□ -1.03
RN7SL39P-201ENST00000462264 NLGN1Q8N2Q7 840 aa8.6□□□□□ -1.03
RN7SL39P-201ENST00000462264 ZNF496Q96IT1 587 aaPredicted RBP8.6□□□□□ -1.03
RN7SL39P-201ENST00000462264 PARP3Q9Y6F1 533 aa8.6□□□□□ -1.03
RN7SL39P-201ENST00000462264 TIAM2Q8IVF5 1701 aa8.6□□□□□ -1.03
RN7SL39P-201ENST00000462264 SBF1O95248 1867 aa8.6□□□□□ -1.03
RN7SL39P-201ENST00000462264 ANKRD36CQ5JPF3 1778 aa8.59□□□□□ -1.03
RN7SL39P-201ENST00000462264 ARFGEF2Q9Y6D5 1785 aa8.59□□□□□ -1.03
RN7SL39P-201ENST00000462264 ZPR1O75312 459 aa8.59□□□□□ -1.03
RN7SL39P-201ENST00000462264 FKBP8Q14318 412 aa8.59□□□□□ -1.03
RN7SL39P-201ENST00000462264 MYBBP1AQ9BQG0 1328 aaKnown RBP8.58□□□□□ -1.04
RN7SL39P-201ENST00000462264 PRAMEF22A3QJZ6 481 aa8.58□□□□□ -1.04
RN7SL39P-201ENST00000462264 STARD3NLO95772 234 aa8.58□□□□□ -1.04
RN7SL39P-201ENST00000462264 PIP4K2AP48426 406 aaPredicted RBP8.58□□□□□ -1.04
RN7SL39P-201ENST00000462264 DDR1Q08345 913 aa8.58□□□□□ -1.04
RN7SL39P-201ENST00000462264 RALBP1Q15311 655 aa8.58□□□□□ -1.04
RN7SL39P-201ENST00000462264 VSIG10Q8N0Z9 540 aa8.58□□□□□ -1.04
RN7SL39P-201ENST00000462264 FMNL2Q96PY5 1086 aa8.58□□□□□ -1.04
RN7SL39P-201ENST00000462264 A0A0G2JLW4 131 aa8.57□□□□□ -1.04
RN7SL39P-201ENST00000462264 GRIN3BO60391 1043 aa8.57□□□□□ -1.04
RN7SL39P-201ENST00000462264 BICDL1Q6ZP65 573 aa8.57□□□□□ -1.04
RN7SL39P-201ENST00000462264 ZNF784Q8NCA9 323 aaPredicted RBP8.57□□□□□ -1.04
RN7SL39P-201ENST00000462264 THUMPD2Q9BTF0 503 aaKnown RBP8.57□□□□□ -1.04
RN7SL39P-201ENST00000462264 MIS18AQ9NYP9 233 aa8.57□□□□□ -1.04
RN7SL39P-201ENST00000462264 BCS1LQ9Y276 419 aa8.57□□□□□ -1.04
RN7SL39P-201ENST00000462264 NFE2L2Q16236 605 aa8.56□□□□□ -1.04
RN7SL39P-201ENST00000462264 NPM2Q86SE8 214 aaKnown RBP8.56□□□□□ -1.04
RN7SL39P-201ENST00000462264 CCDC146Q8IYE0 955 aa8.56□□□□□ -1.04
RN7SL39P-201ENST00000462264 PLEKHF1Q96S99 279 aa8.56□□□□□ -1.04
RN7SL39P-201ENST00000462264 NARFQ9UHQ1 456 aa8.56□□□□□ -1.04
RN7SL39P-201ENST00000462264 TBC1D2BQ9UPU7 963 aa8.56□□□□□ -1.04
RN7SL39P-201ENST00000462264 CARMIL3Q8ND23 1372 aa8.56□□□□□ -1.04
RN7SL39P-201ENST00000462264 TNRC6CQ9HCJ0 1690 aaKnown RBP8.56□□□□□ -1.04
RN7SL39P-201ENST00000462264 DICER1Q9UPY3 1922 aaKnown RBP8.55□□□□□ -1.04
RN7SL39P-201ENST00000462264 POLRMTO00411 1230 aaKnown RBP8.55□□□□□ -1.04
RN7SL39P-201ENST00000462264 A1BGP04217 495 aa8.55□□□□□ -1.04
RN7SL39P-201ENST00000462264 DPEP1P16444 411 aa8.55□□□□□ -1.04
RN7SL39P-201ENST00000462264 NFIXQ14938 502 aa8.55□□□□□ -1.04
RN7SL39P-201ENST00000462264 WDR43Q15061 677 aaKnown RBP eCLIP8.55□□□□□ -1.04
RN7SL39P-201ENST00000462264 TEX13AQ9BXU3 409 aaPredicted RBP8.55□□□□□ -1.04
RN7SL39P-201ENST00000462264 RRP7AQ9Y3A4 280 aaKnown RBP8.55□□□□□ -1.04
RN7SL39P-201ENST00000462264 ATP10DQ9P241 1426 aa8.54□□□□□ -1.04
RN7SL39P-201ENST00000462264 FER1L6Q2WGJ9 1857 aa8.54□□□□□ -1.04
RN7SL39P-201ENST00000462264 LAMB2P55268 1798 aa8.54□□□□□ -1.04
RN7SL39P-201ENST00000462264 NPHP1O15259 732 aa8.54□□□□□ -1.04
RN7SL39P-201ENST00000462264 HTATSF1O43719 755 aaKnown RBP8.54□□□□□ -1.04
RN7SL39P-201ENST00000462264 CHRNA5P30532 468 aa8.54□□□□□ -1.04
RN7SL39P-201ENST00000462264 IL6STP40189 918 aaPredicted RBP8.54□□□□□ -1.04
RN7SL39P-201ENST00000462264 EIF5P55010 431 aaKnown RBP8.54□□□□□ -1.04
RN7SL39P-201ENST00000462264 TGFB2P61812 414 aa8.54□□□□□ -1.04
RN7SL39P-201ENST00000462264 TAF7Q15545 349 aaPredicted RBP8.54□□□□□ -1.04
RN7SL39P-201ENST00000462264 NEUROD2Q15784 382 aa8.54□□□□□ -1.04
RN7SL39P-201ENST00000462264 TBC1D9BQ66K14 1250 aa8.54□□□□□ -1.04
RN7SL39P-201ENST00000462264 ZNF526Q8TF50 670 aaPredicted RBP8.54□□□□□ -1.04
RN7SL39P-201ENST00000462264 PNNQ9H307 717 aaKnown RBP8.54□□□□□ -1.04
RN7SL39P-201ENST00000462264 BCL2L12Q9HB09 334 aa8.54□□□□□ -1.04
RN7SL39P-201ENST00000462264 USP16Q9Y5T5 823 aa8.54□□□□□ -1.04
RN7SL39P-201ENST00000462264 SLX4Q8IY92 1834 aa8.53□□□□□ -1.04
RN7SL39P-201ENST00000462264 A0A087WZG4 1122 aa8.53□□□□□ -1.04
RN7SL39P-201ENST00000462264 SERPINB2P05120 415 aa8.53□□□□□ -1.04
RN7SL39P-201ENST00000462264 SNRPA1P09661 255 aaKnown RBP8.53□□□□□ -1.04
RN7SL39P-201ENST00000462264 TM4SF1P30408 202 aa8.53□□□□□ -1.04
RN7SL39P-201ENST00000462264 ZEB1P37275 1124 aaPredicted RBP8.53□□□□□ -1.04
RN7SL39P-201ENST00000462264 RIPK4P57078 832 aa8.53□□□□□ -1.04
RN7SL39P-201ENST00000462264 DZIP3Q86Y13 1208 aaKnown RBP8.53□□□□□ -1.04
RN7SL39P-201ENST00000462264 CCDC24Q8N4L8 307 aa8.53□□□□□ -1.04
RN7SL39P-201ENST00000462264 PRKRIP1Q9H875 184 aaPredicted RBP8.53□□□□□ -1.04
RN7SL39P-201ENST00000462264 ARHGAP27Q6ZUM4 889 aa8.52□□□□□ -1.05
RN7SL39P-201ENST00000462264 NGEFQ8N5V2 710 aa8.52□□□□□ -1.05
RN7SL39P-201ENST00000462264 ADCY9O60503 1353 aa8.51□□□□□ -1.05
RN7SL39P-201ENST00000462264 GIGYF1O75420 1035 aaPredicted RBP8.51□□□□□ -1.05
RN7SL39P-201ENST00000462264 CAMTA2O94983 1202 aa8.51□□□□□ -1.05
RN7SL39P-201ENST00000462264 MYL6BP14649 208 aa8.51□□□□□ -1.05
RN7SL39P-201ENST00000462264 KCNA3P22001 575 aa8.51□□□□□ -1.05
RN7SL39P-201ENST00000462264 TMPOP42166 694 aaKnown RBP8.51□□□□□ -1.05
RN7SL39P-201ENST00000462264 PIM2Q9P1W9 311 aa8.51□□□□□ -1.05
RN7SL39P-201ENST00000462264 TSPYL4Q9UJ04 414 aa8.51□□□□□ -1.05
RN7SL39P-201ENST00000462264 LAS1LQ9Y4W2 734 aaKnown RBP8.51□□□□□ -1.05
RN7SL39P-201ENST00000462264 FAM177BA6PVY3 158 aa8.5□□□□□ -1.05
RN7SL39P-201ENST00000462264 NBPF26B4DH59 902 aa8.5□□□□□ -1.05
RN7SL39P-201ENST00000462264 TAF1P21675 1872 aa8.5□□□□□ -1.05
RN7SL39P-201ENST00000462264 LMOD3Q0VAK6 560 aa8.5□□□□□ -1.05
RN7SL39P-201ENST00000462264 DALRD3Q5D0E6 543 aaKnown RBP8.5□□□□□ -1.05
RN7SL39P-201ENST00000462264 NBPF10Q6P3W6 841 aaKnown RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms