RNA–Protein interactions for RNA: ENST00000462257.1

SH3D19-205, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 882 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-205ENST00000462257 NBPF3Q9H094 633 aa10.12□□□□□ -0.79
SH3D19-205ENST00000462257 PAPPAQ13219 1627 aa10.11□□□□□ -0.79
SH3D19-205ENST00000462257 COL24A1Q17RW2 1714 aa10.11□□□□□ -0.79
SH3D19-205ENST00000462257 ACSBG1Q96GR2 724 aa10.11□□□□□ -0.79
SH3D19-205ENST00000462257 PCDHGA10Q9Y5H3 936 aa10.11□□□□□ -0.79
SH3D19-205ENST00000462257 BTAF1O14981 1849 aa10.11□□□□□ -0.79
SH3D19-205ENST00000462257 KAT6BQ8WYB5 2073 aa10.1□□□□□ -0.79
SH3D19-205ENST00000462257 NLRP2Q9NX02 1062 aa10.1□□□□□ -0.79
SH3D19-205ENST00000462257 ZBED2Q9BTP6 218 aa10.09□□□□□ -0.79
SH3D19-205ENST00000462257 TFCP2L1Q9NZI6 479 aa10.09□□□□□ -0.79
SH3D19-205ENST00000462257 KTN1Q86UP2 1357 aaKnown RBP10.09□□□□□ -0.79
SH3D19-205ENST00000462257 NFAT5O94916 1531 aa10.08□□□□□ -0.8
SH3D19-205ENST00000462257 DPYSL4O14531 572 aa10.08□□□□□ -0.8
SH3D19-205ENST00000462257 ZNF827Q17R98 1081 aa10.08□□□□□ -0.8
SH3D19-205ENST00000462257 PAXIP1Q6ZW49 1069 aaPredicted RBP10.08□□□□□ -0.8
SH3D19-205ENST00000462257 LRRC4BQ9NT99 713 aa10.08□□□□□ -0.8
SH3D19-205ENST00000462257 USP31Q70CQ4 1352 aa10.07□□□□□ -0.8
SH3D19-205ENST00000462257 UTRNP46939 3433 aa10.07□□□□□ -0.8
SH3D19-205ENST00000462257 PHF14O94880 888 aa10.06□□□□□ -0.8
SH3D19-205ENST00000462257 CFAP44Q96MT7 982 aa10.06□□□□□ -0.8
SH3D19-205ENST00000462257 SHANK3Q9BYB0 1731 aa10.06□□□□□ -0.8
SH3D19-205ENST00000462257 LTN1O94822 1766 aa10.06□□□□□ -0.8
SH3D19-205ENST00000462257 PNPLA7Q6ZV29 1317 aa10.06□□□□□ -0.8
SH3D19-205ENST00000462257 TYW1BQ6NUM6 668 aa10.05□□□□□ -0.8
SH3D19-205ENST00000462257 ANKRD24Q8TF21 1146 aa10.05□□□□□ -0.8
SH3D19-205ENST00000462257 GPBP1L1Q9HC44 474 aaPredicted RBP10.05□□□□□ -0.8
SH3D19-205ENST00000462257 USP54Q70EL1 1684 aa10.05□□□□□ -0.8
SH3D19-205ENST00000462257 FAM208AQ9UK61 1670 aaKnown RBP10.04□□□□□ -0.8
SH3D19-205ENST00000462257 ITGBL1O95965 494 aaPredicted RBP10.04□□□□□ -0.8
SH3D19-205ENST00000462257 HSPA6P17066 643 aa10.04□□□□□ -0.8
SH3D19-205ENST00000462257 ANKK1Q8NFD2 765 aa10.04□□□□□ -0.8
SH3D19-205ENST00000462257 FLAD1Q8NFF5 587 aa10.04□□□□□ -0.8
SH3D19-205ENST00000462257 NLGN2Q8NFZ4 835 aa10.04□□□□□ -0.8
SH3D19-205ENST00000462257 DDX54Q8TDD1 881 aaKnown RBP10.04□□□□□ -0.8
SH3D19-205ENST00000462257 FBXW7Q969H0 707 aa10.04□□□□□ -0.8
SH3D19-205ENST00000462257 CD2APQ9Y5K6 639 aa10.04□□□□□ -0.8
SH3D19-205ENST00000462257 MON2Q7Z3U7 1717 aa10.04□□□□□ -0.8
SH3D19-205ENST00000462257 ANKRD36BQ8N2N9 1353 aa10.03□□□□□ -0.8
SH3D19-205ENST00000462257 LY75O60449 1722 aa10.03□□□□□ -0.8
SH3D19-205ENST00000462257 LAPTM4AQ15012 233 aa10.03□□□□□ -0.8
SH3D19-205ENST00000462257 HDGFL2Q7Z4V5 671 aaPredicted RBP10.03□□□□□ -0.8
SH3D19-205ENST00000462257 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.03□□□□□ -0.8
SH3D19-205ENST00000462257 SYTL4Q96C24 671 aaPredicted RBP10.03□□□□□ -0.8
SH3D19-205ENST00000462257 CEP350Q5VT06 3117 aa10.03□□□□□ -0.8
SH3D19-205ENST00000462257 PPP1R3GB7ZBB8 358 aa10.02□□□□□ -0.81
SH3D19-205ENST00000462257 YBX3P16989 372 aaKnown RBP eCLIP10.02□□□□□ -0.81
SH3D19-205ENST00000462257 PRIM1P49642 420 aaKnown RBP10.02□□□□□ -0.81
SH3D19-205ENST00000462257 IP6K1Q92551 441 aa10.02□□□□□ -0.81
SH3D19-205ENST00000462257 TUBGCP6Q96RT7 1819 aa10.02□□□□□ -0.81
SH3D19-205ENST00000462257 ATP10DQ9P241 1426 aa10.01□□□□□ -0.81
SH3D19-205ENST00000462257 COL9A1P20849 921 aa10.01□□□□□ -0.81
SH3D19-205ENST00000462257 EPAS1Q99814 870 aa10.01□□□□□ -0.81
SH3D19-205ENST00000462257 TERF2IPQ9NYB0 399 aa10.01□□□□□ -0.81
SH3D19-205ENST00000462257 CCNL1Q9UK58 526 aaPredicted RBP10.01□□□□□ -0.81
SH3D19-205ENST00000462257 ROCK2O75116 1388 aaKnown RBP10.01□□□□□ -0.81
SH3D19-205ENST00000462257 USP47Q96K76 1375 aa10.01□□□□□ -0.81
SH3D19-205ENST00000462257 PDIA6Q15084 440 aa10□□□□□ -0.81
SH3D19-205ENST00000462257 NME9Q86XW9 330 aa10□□□□□ -0.81
SH3D19-205ENST00000462257 ZCRB1Q8TBF4 217 aaKnown RBP10□□□□□ -0.81
SH3D19-205ENST00000462257 L3MBTL2Q969R5 705 aa10□□□□□ -0.81
SH3D19-205ENST00000462257 CGNL1Q0VF96 1302 aa10□□□□□ -0.81
SH3D19-205ENST00000462257 SBNO2Q9Y2G9 1366 aa10□□□□□ -0.81
SH3D19-205ENST00000462257 EDC4Q6P2E9 1401 aaKnown RBP9.99□□□□□ -0.81
SH3D19-205ENST00000462257 E2F4Q16254 413 aa9.99□□□□□ -0.81
SH3D19-205ENST00000462257 COL23A1Q86Y22 540 aaPredicted RBP9.99□□□□□ -0.81
SH3D19-205ENST00000462257 PUS7Q96PZ0 661 aaKnown RBP9.99□□□□□ -0.81
SH3D19-205ENST00000462257 ARIH1Q9Y4X5 557 aaPredicted RBP9.99□□□□□ -0.81
SH3D19-205ENST00000462257 DOT1LQ8TEK3 1739 aa9.99□□□□□ -0.81
SH3D19-205ENST00000462257 KCNQ4P56696 695 aa9.98□□□□□ -0.81
SH3D19-205ENST00000462257 NYAP1Q6ZVC0 841 aa9.98□□□□□ -0.81
SH3D19-205ENST00000462257 TMC1Q8TDI8 760 aa9.98□□□□□ -0.81
SH3D19-205ENST00000462257 GOLGB1Q14789 3259 aaKnown RBP9.97□□□□□ -0.81
SH3D19-205ENST00000462257 SPDYE16A6NNV3 312 aaPredicted RBP9.97□□□□□ -0.81
SH3D19-205ENST00000462257 SLC24A1O60721 1099 aa9.97□□□□□ -0.81
SH3D19-205ENST00000462257 KCNC4Q03721 635 aa9.97□□□□□ -0.81
SH3D19-205ENST00000462257 C6orf132Q5T0Z8 1188 aa9.97□□□□□ -0.81
SH3D19-205ENST00000462257 DDX12PQ92771 950 aa9.97□□□□□ -0.81
SH3D19-205ENST00000462257 PCGF6Q9BYE7 350 aa9.97□□□□□ -0.81
SH3D19-205ENST00000462257 ADCY9O60503 1353 aa9.97□□□□□ -0.81
SH3D19-205ENST00000462257 AMPHP49418 695 aa9.96□□□□□ -0.82
SH3D19-205ENST00000462257 APLP1P51693 650 aa9.96□□□□□ -0.82
SH3D19-205ENST00000462257 PROX2Q3B8N5 592 aa9.96□□□□□ -0.82
SH3D19-205ENST00000462257 LTV1Q96GA3 475 aaPredicted RBP9.96□□□□□ -0.82
SH3D19-205ENST00000462257 COG3Q96JB2 828 aa9.96□□□□□ -0.82
SH3D19-205ENST00000462257 RABGEF1Q9UJ41 708 aa9.96□□□□□ -0.82
SH3D19-205ENST00000462257 NSD2O96028 1365 aa9.96□□□□□ -0.82
SH3D19-205ENST00000462257 NSD3Q9BZ95 1437 aa9.96□□□□□ -0.82
SH3D19-205ENST00000462257 C5P01031 1676 aa9.96□□□□□ -0.82
SH3D19-205ENST00000462257 TRAF7Q6Q0C0 670 aa9.95□□□□□ -0.82
SH3D19-205ENST00000462257 ZNF526Q8TF50 670 aaPredicted RBP9.95□□□□□ -0.82
SH3D19-205ENST00000462257 RAPGEF4Q8WZA2 1011 aa9.95□□□□□ -0.82
SH3D19-205ENST00000462257 SMARCC1Q92922 1105 aaPredicted RBP9.95□□□□□ -0.82
SH3D19-205ENST00000462257 SLC12A5Q9H2X9 1139 aa9.95□□□□□ -0.82
SH3D19-205ENST00000462257 CD163L1Q9NR16 1453 aa9.95□□□□□ -0.82
SH3D19-205ENST00000462257 TAF1LQ8IZX4 1826 aa9.94□□□□□ -0.82
SH3D19-205ENST00000462257 HOXC9P31274 260 aa9.94□□□□□ -0.82
SH3D19-205ENST00000462257 BCAMP50895 628 aa9.94□□□□□ -0.82
SH3D19-205ENST00000462257 MSL1Q68DK7 614 aa9.94□□□□□ -0.82
SH3D19-205ENST00000462257 WDR70Q9NW82 654 aa9.94□□□□□ -0.82
SH3D19-205ENST00000462257 TOMM70O94826 608 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms