RNA–Protein interactions for RNA: ENST00000461889.1

TRAPPC10-205, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-205ENST00000461889 PAXIP1Q6ZW49 1069 aaPredicted RBP10.2□□□□□ -0.78
TRAPPC10-205ENST00000461889 USP31Q70CQ4 1352 aa10.2□□□□□ -0.78
TRAPPC10-205ENST00000461889 PNMA8AQ86V59 439 aaPredicted RBP10.2□□□□□ -0.78
TRAPPC10-205ENST00000461889 STAC3Q96MF2 364 aa10.2□□□□□ -0.78
TRAPPC10-205ENST00000461889 CABP2Q9NPB3 220 aa10.2□□□□□ -0.78
TRAPPC10-205ENST00000461889 TTLL6Q8N841 843 aa10.19□□□□□ -0.78
TRAPPC10-205ENST00000461889 CLEC11AQ9Y240 323 aa10.19□□□□□ -0.78
TRAPPC10-205ENST00000461889 TLL2Q9Y6L7 1015 aa10.19□□□□□ -0.78
TRAPPC10-205ENST00000461889 MKI67P46013 3256 aaKnown RBP10.18□□□□□ -0.78
TRAPPC10-205ENST00000461889 SMG6Q86US8 1419 aaKnown RBP10.18□□□□□ -0.78
TRAPPC10-205ENST00000461889 LTBP3Q9NS15 1303 aa10.18□□□□□ -0.78
TRAPPC10-205ENST00000461889 RFC4P35249 363 aa10.18□□□□□ -0.78
TRAPPC10-205ENST00000461889 DDR1Q08345 913 aa10.18□□□□□ -0.78
TRAPPC10-205ENST00000461889 GRM1Q13255 1194 aa10.18□□□□□ -0.78
TRAPPC10-205ENST00000461889 EAPPQ56P03 285 aaPredicted RBP10.18□□□□□ -0.78
TRAPPC10-205ENST00000461889 MAP1SQ66K74 1059 aaPredicted RBP10.18□□□□□ -0.78
TRAPPC10-205ENST00000461889 HHIPL1Q96JK4 782 aa10.18□□□□□ -0.78
TRAPPC10-205ENST00000461889 INSRP06213 1382 aa10.17□□□□□ -0.78
TRAPPC10-205ENST00000461889 ITGB4P16144 1822 aa10.17□□□□□ -0.78
TRAPPC10-205ENST00000461889 DLEC1Q9Y238 1755 aa10.17□□□□□ -0.78
TRAPPC10-205ENST00000461889 RC3H1Q5TC82 1133 aaKnown RBP10.17□□□□□ -0.78
TRAPPC10-205ENST00000461889 PIGBQ92521 554 aa10.17□□□□□ -0.78
TRAPPC10-205ENST00000461889 IP6K1Q92551 441 aa10.17□□□□□ -0.78
TRAPPC10-205ENST00000461889 EPHX2P34913 555 aa10.16□□□□□ -0.78
TRAPPC10-205ENST00000461889 ATP6V1AP38606 617 aa10.16□□□□□ -0.78
TRAPPC10-205ENST00000461889 CST9Q5W186 159 aa10.16□□□□□ -0.78
TRAPPC10-205ENST00000461889 POTEGQ6S5H5 508 aa10.16□□□□□ -0.78
TRAPPC10-205ENST00000461889 MPHOSPH9Q99550 1183 aa10.16□□□□□ -0.78
TRAPPC10-205ENST00000461889 HACL1Q9UJ83 578 aa10.16□□□□□ -0.78
TRAPPC10-205ENST00000461889 HPS5Q9UPZ3 1129 aa10.16□□□□□ -0.78
TRAPPC10-205ENST00000461889 TRIOBPQ9H2D6 2365 aa10.16□□□□□ -0.78
TRAPPC10-205ENST00000461889 CD163L1Q9NR16 1453 aa10.16□□□□□ -0.78
TRAPPC10-205ENST00000461889 FER1L6Q2WGJ9 1857 aa10.15□□□□□ -0.78
TRAPPC10-205ENST00000461889 MAP3K19Q56UN5 1328 aa10.15□□□□□ -0.78
TRAPPC10-205ENST00000461889 PCDH11XQ9BZA7 1347 aa10.15□□□□□ -0.78
TRAPPC10-205ENST00000461889 PCDH11YQ9BZA8 1340 aa10.15□□□□□ -0.78
TRAPPC10-205ENST00000461889 RPS6KA4O75676 772 aa10.15□□□□□ -0.78
TRAPPC10-205ENST00000461889 CIAPIN1Q6FI81 312 aa10.15□□□□□ -0.78
TRAPPC10-205ENST00000461889 CTU1Q7Z7A3 348 aaKnown RBP10.15□□□□□ -0.78
TRAPPC10-205ENST00000461889 SAGE1Q9NXZ1 904 aa10.15□□□□□ -0.78
TRAPPC10-205ENST00000461889 POLRMTO00411 1230 aaKnown RBP10.14□□□□□ -0.79
TRAPPC10-205ENST00000461889 TM4SF1P30408 202 aa10.14□□□□□ -0.79
TRAPPC10-205ENST00000461889 COLQQ9Y215 455 aaPredicted RBP10.14□□□□□ -0.79
TRAPPC10-205ENST00000461889 TRPM7Q96QT4 1865 aa10.13□□□□□ -0.79
TRAPPC10-205ENST00000461889 FKBP8Q14318 412 aa10.13□□□□□ -0.79
TRAPPC10-205ENST00000461889 PKN2Q16513 984 aaKnown RBP10.13□□□□□ -0.79
TRAPPC10-205ENST00000461889 SAPCD2Q86UD0 394 aa10.13□□□□□ -0.79
TRAPPC10-205ENST00000461889 ZNF831Q5JPB2 1677 aa10.12□□□□□ -0.79
TRAPPC10-205ENST00000461889 CNTNAP4Q9C0A0 1308 aa10.12□□□□□ -0.79
TRAPPC10-205ENST00000461889 LTV1Q96GA3 475 aaPredicted RBP10.12□□□□□ -0.79
TRAPPC10-205ENST00000461889 TAOK3Q9H2K8 898 aa10.12□□□□□ -0.79
TRAPPC10-205ENST00000461889 CYP27B1O15528 508 aa10.11□□□□□ -0.79
TRAPPC10-205ENST00000461889 NOGQ13253 232 aa10.11□□□□□ -0.79
TRAPPC10-205ENST00000461889 NKX1-1Q15270 411 aaPredicted RBP10.11□□□□□ -0.79
TRAPPC10-205ENST00000461889 AKAP4Q5JQC9 854 aa10.11□□□□□ -0.79
TRAPPC10-205ENST00000461889 USP42Q9H9J4 1324 aaKnown RBP10.1□□□□□ -0.79
TRAPPC10-205ENST00000461889 FMR1Q06787 632 aaKnown RBP eCLIP10.1□□□□□ -0.791e-6■■■■■ 30.1
TRAPPC10-205ENST00000461889 DCAF11Q8TEB1 546 aa10.1□□□□□ -0.79
TRAPPC10-205ENST00000461889 RAPGEF4Q8WZA2 1011 aa10.1□□□□□ -0.79
TRAPPC10-205ENST00000461889 ASAP1Q9ULH1 1129 aa10.1□□□□□ -0.79
TRAPPC10-205ENST00000461889 KDM2AQ9Y2K7 1162 aa10.1□□□□□ -0.79
TRAPPC10-205ENST00000461889 KDRP35968 1356 aa10.1□□□□□ -0.79
TRAPPC10-205ENST00000461889 KTN1Q86UP2 1357 aaKnown RBP10.1□□□□□ -0.79
TRAPPC10-205ENST00000461889 CENPJQ9HC77 1338 aaPredicted RBP10.09□□□□□ -0.79
TRAPPC10-205ENST00000461889 H0YIN7 160 aa10.09□□□□□ -0.79
TRAPPC10-205ENST00000461889 C2CD5Q86YS7 1000 aa10.09□□□□□ -0.79
TRAPPC10-205ENST00000461889 NRXN2Q9P2S2 1712 aa10.09□□□□□ -0.79
TRAPPC10-205ENST00000461889 RGPD2P0DJD1 1756 aa10.09□□□□□ -0.79
TRAPPC10-205ENST00000461889 C21orf2O43822 256 aa10.08□□□□□ -0.8
TRAPPC10-205ENST00000461889 TATP17735 454 aaPredicted RBP10.08□□□□□ -0.8
TRAPPC10-205ENST00000461889 ATG3Q9NT62 314 aa10.08□□□□□ -0.8
TRAPPC10-205ENST00000461889 COL5A3P25940 1745 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC10-205ENST00000461889 CEP290O15078 2479 aa10.07□□□□□ -0.8
TRAPPC10-205ENST00000461889 LOC105371045A0A1W2PR82 267 aa10.07□□□□□ -0.8
TRAPPC10-205ENST00000461889 NBPF6Q5VWK0 638 aa10.07□□□□□ -0.8
TRAPPC10-205ENST00000461889 NME9Q86XW9 330 aa10.07□□□□□ -0.8
TRAPPC10-205ENST00000461889 OTUD5Q96G74 571 aa10.07□□□□□ -0.8
TRAPPC10-205ENST00000461889 NBPF4Q96M43 638 aa10.07□□□□□ -0.8
TRAPPC10-205ENST00000461889 SLC4A9Q96Q91 983 aa10.07□□□□□ -0.8
TRAPPC10-205ENST00000461889 ZIC5Q96T25 663 aa10.07□□□□□ -0.8
TRAPPC10-205ENST00000461889 COL25A1Q9BXS0 654 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC10-205ENST00000461889 TMOD3Q9NYL9 352 aa10.07□□□□□ -0.8
TRAPPC10-205ENST00000461889 SRP68Q9UHB9 627 aaKnown RBP10.07□□□□□ -0.8
TRAPPC10-205ENST00000461889 PDZRN3Q9UPQ7 1066 aa10.07□□□□□ -0.8
TRAPPC10-205ENST00000461889 RANBP2P49792 3224 aaKnown RBP10.07□□□□□ -0.8
TRAPPC10-205ENST00000461889 RNF123Q5XPI4 1314 aa10.07□□□□□ -0.8
TRAPPC10-205ENST00000461889 ZNF541Q9H0D2 1346 aa10.07□□□□□ -0.8
TRAPPC10-205ENST00000461889 MYH14Q7Z406 1995 aaKnown RBP10.06□□□□□ -0.8
TRAPPC10-205ENST00000461889 AFDNP55196 1824 aaKnown RBP10.06□□□□□ -0.8
TRAPPC10-205ENST00000461889 HOXC9P31274 260 aa10.06□□□□□ -0.8
TRAPPC10-205ENST00000461889 MPNDQ8N594 471 aa10.06□□□□□ -0.8
TRAPPC10-205ENST00000461889 MON2Q7Z3U7 1717 aa10.06□□□□□ -0.8
TRAPPC10-205ENST00000461889 UNC80Q8N2C7 3258 aa10.05□□□□□ -0.8
TRAPPC10-205ENST00000461889 TRAF5O00463 557 aa10.05□□□□□ -0.8
TRAPPC10-205ENST00000461889 SOGA3Q5TF21 947 aa10.05□□□□□ -0.8
TRAPPC10-205ENST00000461889 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.05□□□□□ -0.8
TRAPPC10-205ENST00000461889 RNF186Q9NXI6 227 aa10.05□□□□□ -0.8
TRAPPC10-205ENST00000461889 EVC2Q86UK5 1308 aa10.05□□□□□ -0.8
TRAPPC10-205ENST00000461889 SBNO2Q9Y2G9 1366 aa10.04□□□□□ -0.8
TRAPPC10-205ENST00000461889 GPC2Q8N158 579 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms