RNA–Protein interactions for RNA: ENST00000461871.1

GTF3C5-208, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 3

Gene GTF3C5, Length 623 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-208ENST00000461871 BCL9O00512 1426 aa17.81■□□□□ 0.44
GTF3C5-208ENST00000461871 DDX58O95786 925 aaKnown RBP17.81■□□□□ 0.44
GTF3C5-208ENST00000461871 FKBP5Q13451 457 aaPredicted RBP17.81■□□□□ 0.44
GTF3C5-208ENST00000461871 HDAC1Q13547 482 aaPredicted RBP17.81■□□□□ 0.44
GTF3C5-208ENST00000461871 HDAC5Q9UQL6 1122 aa17.81■□□□□ 0.44
GTF3C5-208ENST00000461871 G2E3Q7L622 706 aa17.8■□□□□ 0.44
GTF3C5-208ENST00000461871 PIGBQ92521 554 aa17.8■□□□□ 0.44
GTF3C5-208ENST00000461871 GJD4Q96KN9 370 aaPredicted RBP17.8■□□□□ 0.44
GTF3C5-208ENST00000461871 UBR2Q8IWV8 1755 aa17.8■□□□□ 0.44
GTF3C5-208ENST00000461871 PAPPAQ13219 1627 aa17.8■□□□□ 0.44
GTF3C5-208ENST00000461871 CHPF2Q9P2E5 772 aa17.79■□□□□ 0.44
GTF3C5-208ENST00000461871 AFF2P51816 1311 aa17.78■□□□□ 0.44
GTF3C5-208ENST00000461871 GNAI3P08754 354 aa17.78■□□□□ 0.44
GTF3C5-208ENST00000461871 PDIA6Q15084 440 aa17.78■□□□□ 0.44
GTF3C5-208ENST00000461871 KSR2Q6VAB6 950 aa17.78■□□□□ 0.44
GTF3C5-208ENST00000461871 MARCH10Q8NA82 808 aaPredicted RBP17.78■□□□□ 0.44
GTF3C5-208ENST00000461871 ATRNO75882 1429 aa17.78■□□□□ 0.44
GTF3C5-208ENST00000461871 RPAP2Q8IXW5 612 aaPredicted RBP17.77■□□□□ 0.44
GTF3C5-208ENST00000461871 SMARCC1Q92922 1105 aaPredicted RBP17.77■□□□□ 0.44
GTF3C5-208ENST00000461871 ATG3Q9NT62 314 aa17.77■□□□□ 0.44
GTF3C5-208ENST00000461871 PCDHB15Q9Y5E8 787 aa17.77■□□□□ 0.44
GTF3C5-208ENST00000461871 ATP10DQ9P241 1426 aa17.76■□□□□ 0.43
GTF3C5-208ENST00000461871 ALDH1L1O75891 902 aa17.76■□□□□ 0.43
GTF3C5-208ENST00000461871 STARD3NLO95772 234 aa17.76■□□□□ 0.43
GTF3C5-208ENST00000461871 FAM98CQ17RN3 349 aaKnown RBP17.76■□□□□ 0.43
GTF3C5-208ENST00000461871 USP16Q9Y5T5 823 aa17.76■□□□□ 0.43
GTF3C5-208ENST00000461871 ITGB4P16144 1822 aa17.76■□□□□ 0.43
GTF3C5-208ENST00000461871 KCPQ6ZWJ8 1503 aa17.76■□□□□ 0.43
GTF3C5-208ENST00000461871 TOGARAM1Q9Y4F4 1720 aa17.75■□□□□ 0.43
GTF3C5-208ENST00000461871 DNAAF4Q8WXU2 420 aa17.75■□□□□ 0.43
GTF3C5-208ENST00000461871 NECTIN2Q92692 538 aa17.75■□□□□ 0.43
GTF3C5-208ENST00000461871 PHAXQ9H814 394 aaKnown RBP17.75■□□□□ 0.43
GTF3C5-208ENST00000461871 PRIM1P49642 420 aaKnown RBP17.74■□□□□ 0.43
GTF3C5-208ENST00000461871 LAMB4A4D0S4 1761 aa17.74■□□□□ 0.43
GTF3C5-208ENST00000461871 PI4KAP2A4QPH2 592 aa17.73■□□□□ 0.43
GTF3C5-208ENST00000461871 HMGB2P26583 209 aaKnown RBP17.73■□□□□ 0.43
GTF3C5-208ENST00000461871 LRP10Q7Z4F1 713 aa17.73■□□□□ 0.43
GTF3C5-208ENST00000461871 PI4KAP1Q8N8J0 262 aa17.73■□□□□ 0.43
GTF3C5-208ENST00000461871 SRCIN1Q9C0H9 1055 aa17.73■□□□□ 0.43
GTF3C5-208ENST00000461871 QTRT2Q9H974 415 aaKnown RBP17.73■□□□□ 0.43
GTF3C5-208ENST00000461871 ASAP1Q9ULH1 1129 aa17.73■□□□□ 0.43
GTF3C5-208ENST00000461871 THSD7AQ9UPZ6 1657 aa17.73■□□□□ 0.43
GTF3C5-208ENST00000461871 N4BP2Q86UW6 1770 aaPredicted RBP17.73■□□□□ 0.43
GTF3C5-208ENST00000461871 IGHDP01880 384 aa17.72■□□□□ 0.43
GTF3C5-208ENST00000461871 ZNF772Q68DY9 489 aaPredicted RBP17.72■□□□□ 0.43
GTF3C5-208ENST00000461871 PRAMEF22A3QJZ6 481 aa17.71■□□□□ 0.43
GTF3C5-208ENST00000461871 F6X3S4 739 aa17.71■□□□□ 0.43
GTF3C5-208ENST00000461871 BEND3Q5T5X7 828 aa17.71■□□□□ 0.43
GTF3C5-208ENST00000461871 SLC4A10Q6U841 1118 aa17.71■□□□□ 0.43
GTF3C5-208ENST00000461871 ANKRD13DQ6ZTN6 518 aa17.71■□□□□ 0.43
GTF3C5-208ENST00000461871 LINS1Q8NG48 757 aa17.71■□□□□ 0.43
GTF3C5-208ENST00000461871 GCC1Q96CN9 775 aa17.71■□□□□ 0.43
GTF3C5-208ENST00000461871 GLI3P10071 1580 aa17.7■□□□□ 0.42
GTF3C5-208ENST00000461871 PTCD1O75127 700 aaKnown RBP17.7■□□□□ 0.42
GTF3C5-208ENST00000461871 GNAI2P04899 355 aa17.7■□□□□ 0.42
GTF3C5-208ENST00000461871 NEXNQ0ZGT2 675 aa17.7■□□□□ 0.42
GTF3C5-208ENST00000461871 SMC5Q8IY18 1101 aa17.7■□□□□ 0.42
GTF3C5-208ENST00000461871 PLBD2Q8NHP8 589 aa17.7■□□□□ 0.42
GTF3C5-208ENST00000461871 C5P01031 1676 aa17.7■□□□□ 0.42
GTF3C5-208ENST00000461871 ADCY9O60503 1353 aa17.69■□□□□ 0.42
GTF3C5-208ENST00000461871 HMMRO75330 724 aa17.69■□□□□ 0.42
GTF3C5-208ENST00000461871 PROSER3Q2NL68 480 aa17.69■□□□□ 0.42
GTF3C5-208ENST00000461871 COPS6Q7L5N1 327 aa17.69■□□□□ 0.42
GTF3C5-208ENST00000461871 ANKRD44Q8N8A2 993 aa17.69■□□□□ 0.42
GTF3C5-208ENST00000461871 MAP3K2Q9Y2U5 619 aa17.69■□□□□ 0.42
GTF3C5-208ENST00000461871 ZNF831Q5JPB2 1677 aa17.68■□□□□ 0.42
GTF3C5-208ENST00000461871 RIC3Q7Z5B4 369 aa17.68■□□□□ 0.42
GTF3C5-208ENST00000461871 XAGE3Q8WTP9 111 aa17.68■□□□□ 0.42
GTF3C5-208ENST00000461871 METTL22Q9BUU2 404 aaPredicted RBP17.68■□□□□ 0.42
GTF3C5-208ENST00000461871 USP44Q9H0E7 712 aa17.68■□□□□ 0.42
GTF3C5-208ENST00000461871 SYTL4Q96C24 671 aaPredicted RBP17.67■□□□□ 0.42
GTF3C5-208ENST00000461871 CICQ96RK0 1608 aaPredicted RBP17.67■□□□□ 0.42
GTF3C5-208ENST00000461871 UTYO14607 1347 aa17.67■□□□□ 0.42
GTF3C5-208ENST00000461871 KAT6BQ8WYB5 2073 aa17.67■□□□□ 0.42
GTF3C5-208ENST00000461871 NBPF26B4DH59 902 aa17.66■□□□□ 0.42
GTF3C5-208ENST00000461871 CYP19A1P11511 503 aaPredicted RBP17.66■□□□□ 0.42
GTF3C5-208ENST00000461871 NBPF14Q5TI25 921 aa17.66■□□□□ 0.42
GTF3C5-208ENST00000461871 NBPF10Q6P3W6 841 aaKnown RBP17.66■□□□□ 0.42
GTF3C5-208ENST00000461871 NBPF15Q8N660 670 aa17.66■□□□□ 0.42
GTF3C5-208ENST00000461871 MEIS3Q99687 375 aa17.66■□□□□ 0.42
GTF3C5-208ENST00000461871 RBM42Q9BTD8 480 aaKnown RBP17.66■□□□□ 0.42
GTF3C5-208ENST00000461871 DOT1LQ8TEK3 1739 aa17.66■□□□□ 0.42
GTF3C5-208ENST00000461871 UBTFL1P0CB47 393 aaPredicted RBP17.65■□□□□ 0.42
GTF3C5-208ENST00000461871 MYL6BP14649 208 aa17.65■□□□□ 0.42
GTF3C5-208ENST00000461871 RBM6P78332 1123 aaKnown RBP17.65■□□□□ 0.42
GTF3C5-208ENST00000461871 SEPT12Q8IYM1 358 aa17.65■□□□□ 0.42
GTF3C5-208ENST00000461871 DCTPP1Q9H773 170 aa17.65■□□□□ 0.42
GTF3C5-208ENST00000461871 RGL2O15211 777 aa17.64■□□□□ 0.41
GTF3C5-208ENST00000461871 ANXA1P04083 346 aa17.64■□□□□ 0.41
GTF3C5-208ENST00000461871 IL6STP40189 918 aaPredicted RBP17.64■□□□□ 0.41
GTF3C5-208ENST00000461871 TRIM28Q13263 835 aaKnown RBP17.64■□□□□ 0.41
GTF3C5-208ENST00000461871 DNAJC10Q8IXB1 793 aa17.64■□□□□ 0.41
GTF3C5-208ENST00000461871 LOC102724428A0A0B4J2F2 783 aa17.63■□□□□ 0.41
GTF3C5-208ENST00000461871 A0A0G2JS52 829 aa17.63■□□□□ 0.41
GTF3C5-208ENST00000461871 A1BGP04217 495 aa17.63■□□□□ 0.41
GTF3C5-208ENST00000461871 SIK1P57059 783 aa17.63■□□□□ 0.41
GTF3C5-208ENST00000461871 ATP8B2P98198 1209 aa17.63■□□□□ 0.41
GTF3C5-208ENST00000461871 MYT1Q01538 1121 aa17.63■□□□□ 0.41
GTF3C5-208ENST00000461871 AIMP1Q12904 312 aaKnown RBP17.63■□□□□ 0.41
GTF3C5-208ENST00000461871 CEP85Q6P2H3 762 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms