RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 E9PCH4 1651 aa11.87□□□□□ -0.51
ECHDC1-212ENST00000461239 ZMIZ1Q9ULJ6 1067 aa11.87□□□□□ -0.51
ECHDC1-212ENST00000461239 RPRD2Q5VT52 1461 aaKnown RBP11.87□□□□□ -0.51
ECHDC1-212ENST00000461239 SLFNL1Q499Z3 407 aa11.86□□□□□ -0.51
ECHDC1-212ENST00000461239 DEPDC4Q8N2C3 294 aa11.86□□□□□ -0.51
ECHDC1-212ENST00000461239 TRIM52Q96A61 297 aa11.86□□□□□ -0.51
ECHDC1-212ENST00000461239 A2ML1A8K2U0 1454 aa11.86□□□□□ -0.51
ECHDC1-212ENST00000461239 CEP170BQ9Y4F5 1589 aaPredicted RBP11.86□□□□□ -0.51
ECHDC1-212ENST00000461239 ZNF142P52746 1687 aaPredicted RBP11.85□□□□□ -0.51
ECHDC1-212ENST00000461239 S1PR4O95977 384 aa11.85□□□□□ -0.51
ECHDC1-212ENST00000461239 KCNA1Q09470 495 aa11.85□□□□□ -0.51
ECHDC1-212ENST00000461239 IDI1Q13907 227 aa11.85□□□□□ -0.51
ECHDC1-212ENST00000461239 RNF135Q8IUD6 432 aa11.85□□□□□ -0.51
ECHDC1-212ENST00000461239 NKX2-3Q8TAU0 364 aa11.85□□□□□ -0.51
ECHDC1-212ENST00000461239 PLA2R1Q13018 1463 aa11.84□□□□□ -0.51
ECHDC1-212ENST00000461239 NLRP1Q9C000 1473 aa11.84□□□□□ -0.51
ECHDC1-212ENST00000461239 NCOA4Q13772 614 aa11.84□□□□□ -0.51
ECHDC1-212ENST00000461239 ZBTB33Q86T24 672 aa11.84□□□□□ -0.51
ECHDC1-212ENST00000461239 PLPP7Q8NBV4 271 aa11.84□□□□□ -0.51
ECHDC1-212ENST00000461239 PTPRTO14522 1441 aa11.84□□□□□ -0.51
ECHDC1-212ENST00000461239 FCF1Q9Y324 198 aaKnown RBP11.83□□□□□ -0.52
ECHDC1-212ENST00000461239 UGGT1Q9NYU2 1555 aa11.83□□□□□ -0.52
ECHDC1-212ENST00000461239 STRCQ7RTU9 1775 aa11.82□□□□□ -0.52
ECHDC1-212ENST00000461239 FAM196BA6NMK8 535 aa11.82□□□□□ -0.52
ECHDC1-212ENST00000461239 PATL2C9JE40 543 aaKnown RBP11.82□□□□□ -0.52
ECHDC1-212ENST00000461239 TRAF7Q6Q0C0 670 aa11.82□□□□□ -0.52
ECHDC1-212ENST00000461239 STK32AQ8WU08 396 aa11.82□□□□□ -0.52
ECHDC1-212ENST00000461239 BAP1Q92560 729 aa11.82□□□□□ -0.52
ECHDC1-212ENST00000461239 MPHOSPH9Q99550 1183 aa11.82□□□□□ -0.52
ECHDC1-212ENST00000461239 GZF1Q9H116 711 aaPredicted RBP11.82□□□□□ -0.52
ECHDC1-212ENST00000461239 MKRN1Q9UHC7 482 aaKnown RBP11.82□□□□□ -0.52
ECHDC1-212ENST00000461239 CRTC2Q53ET0 693 aaPredicted RBP11.81□□□□□ -0.52
ECHDC1-212ENST00000461239 C4orf48Q5BLP8 95 aa11.81□□□□□ -0.52
ECHDC1-212ENST00000461239 TMEM164Q5U3C3 297 aa11.81□□□□□ -0.52
ECHDC1-212ENST00000461239 CARD14Q9BXL6 1004 aa11.81□□□□□ -0.52
ECHDC1-212ENST00000461239 NOVA2Q9UNW9 492 aaKnown RBP11.81□□□□□ -0.52
ECHDC1-212ENST00000461239 PIK3C2BO00750 1634 aa11.81□□□□□ -0.52
ECHDC1-212ENST00000461239 MAGEB6P1A0A0J9YX57 407 aa11.8□□□□□ -0.52
ECHDC1-212ENST00000461239 USP17L15C9J2P7 530 aa11.8□□□□□ -0.52
ECHDC1-212ENST00000461239 USP17L10C9JJH3 530 aa11.8□□□□□ -0.52
ECHDC1-212ENST00000461239 USP17L13C9JLJ4 530 aa11.8□□□□□ -0.52
ECHDC1-212ENST00000461239 USP17L12C9JPN9 530 aa11.8□□□□□ -0.52
ECHDC1-212ENST00000461239 USP17L11C9JVI0 530 aa11.8□□□□□ -0.52
ECHDC1-212ENST00000461239 USP17L21D6R901 530 aa11.8□□□□□ -0.52
ECHDC1-212ENST00000461239 USP17L18D6R9N7 530 aa11.8□□□□□ -0.52
ECHDC1-212ENST00000461239 USP17L22D6RA61 530 aa11.8□□□□□ -0.52
ECHDC1-212ENST00000461239 USP17L17D6RBQ6 530 aa11.8□□□□□ -0.52
ECHDC1-212ENST00000461239 USP17L19D6RCP7 530 aa11.8□□□□□ -0.52
ECHDC1-212ENST00000461239 USP17L20D6RJB6 530 aa11.8□□□□□ -0.52
ECHDC1-212ENST00000461239 LZTS3O60299 673 aaPredicted RBP11.8□□□□□ -0.52
ECHDC1-212ENST00000461239 USP17L24Q0WX57 530 aa11.8□□□□□ -0.52
ECHDC1-212ENST00000461239 LINC01559Q495D7 138 aa11.8□□□□□ -0.52
ECHDC1-212ENST00000461239 ERFEQ4G0M1 354 aa11.8□□□□□ -0.52
ECHDC1-212ENST00000461239 DZIP3Q86Y13 1208 aaKnown RBP11.8□□□□□ -0.52
ECHDC1-212ENST00000461239 ZNF511Q8NB15 262 aa11.8□□□□□ -0.52
ECHDC1-212ENST00000461239 FOXJ1Q92949 421 aa11.8□□□□□ -0.52
ECHDC1-212ENST00000461239 SLC52A1Q9NWF4 448 aa11.8□□□□□ -0.52
ECHDC1-212ENST00000461239 UBR1Q8IWV7 1749 aa11.8□□□□□ -0.52
ECHDC1-212ENST00000461239 PTK7Q13308 1070 aa11.79□□□□□ -0.52
ECHDC1-212ENST00000461239 MAP7D1Q3KQU3 841 aa11.79□□□□□ -0.52
ECHDC1-212ENST00000461239 TSGA10IPQ3SY00 556 aa11.79□□□□□ -0.52
ECHDC1-212ENST00000461239 BPHLQ86WA6 291 aaPredicted RBP11.79□□□□□ -0.52
ECHDC1-212ENST00000461239 ATP5J2-PTCD1G3V325 749 aa11.78□□□□□ -0.52
ECHDC1-212ENST00000461239 ARHGAP23Q9P227 1491 aa11.77□□□□□ -0.52
ECHDC1-212ENST00000461239 LTKP29376 864 aa11.77□□□□□ -0.53
ECHDC1-212ENST00000461239 THEMISQ8N1K5 641 aaPredicted RBP11.77□□□□□ -0.53
ECHDC1-212ENST00000461239 CCDC85AQ96PX6 553 aaPredicted RBP11.77□□□□□ -0.53
ECHDC1-212ENST00000461239 C1QTNF2Q9BXJ5 285 aa11.77□□□□□ -0.53
ECHDC1-212ENST00000461239 SPHKAPQ2M3C7 1700 aa11.77□□□□□ -0.53
ECHDC1-212ENST00000461239 TRPM2O94759 1503 aa11.76□□□□□ -0.53
ECHDC1-212ENST00000461239 TMEM131LA2VDJ0 1609 aa11.76□□□□□ -0.53
ECHDC1-212ENST00000461239 EML3Q32P44 896 aa11.76□□□□□ -0.53
ECHDC1-212ENST00000461239 TMCO4Q5TGY1 634 aa11.76□□□□□ -0.53
ECHDC1-212ENST00000461239 ADGRB3O60242 1522 aa11.76□□□□□ -0.53
ECHDC1-212ENST00000461239 SLIT1O75093 1534 aa11.76□□□□□ -0.53
ECHDC1-212ENST00000461239 NEURL4Q96JN8 1562 aa11.75□□□□□ -0.53
ECHDC1-212ENST00000461239 CLTCL1P53675 1640 aa11.75□□□□□ -0.53
ECHDC1-212ENST00000461239 GIGYF1O75420 1035 aaPredicted RBP11.75□□□□□ -0.53
ECHDC1-212ENST00000461239 RASA1P20936 1047 aa11.75□□□□□ -0.53
ECHDC1-212ENST00000461239 HCSTQ9UBK5 93 aa11.75□□□□□ -0.53
ECHDC1-212ENST00000461239 TMEM2Q9UHN6 1383 aa11.75□□□□□ -0.53
ECHDC1-212ENST00000461239 KDM5AP29375 1690 aaKnown RBP11.75□□□□□ -0.53
ECHDC1-212ENST00000461239 SH3BP2P78314 561 aa11.74□□□□□ -0.53
ECHDC1-212ENST00000461239 AGERQ15109 404 aa11.74□□□□□ -0.53
ECHDC1-212ENST00000461239 LARP1Q6PKG0 1096 aaKnown RBP11.74□□□□□ -0.53
ECHDC1-212ENST00000461239 ZFYVE9O95405 1425 aa11.73□□□□□ -0.53
ECHDC1-212ENST00000461239 CLDN10P78369 228 aa11.73□□□□□ -0.53
ECHDC1-212ENST00000461239 ANKLE2Q86XL3 938 aa11.73□□□□□ -0.53
ECHDC1-212ENST00000461239 MYO5BQ9ULV0 1848 aa11.73□□□□□ -0.53
ECHDC1-212ENST00000461239 DOLKQ9UPQ8 538 aa11.73□□□□□ -0.53
ECHDC1-212ENST00000461239 IVNS1ABPQ9Y6Y0 642 aa11.73□□□□□ -0.53
ECHDC1-212ENST00000461239 MED14O60244 1454 aa11.72□□□□□ -0.53
ECHDC1-212ENST00000461239 ANKRD30BQ9BXX2 1392 aa11.72□□□□□ -0.53
ECHDC1-212ENST00000461239 PPEF1O14829 653 aaPredicted RBP11.72□□□□□ -0.53
ECHDC1-212ENST00000461239 ANKMY2Q8IV38 441 aa11.72□□□□□ -0.53
ECHDC1-212ENST00000461239 TRMT44Q8IYL2 757 aaKnown RBP11.72□□□□□ -0.53
ECHDC1-212ENST00000461239 OGFOD1Q8N543 542 aa11.72□□□□□ -0.53
ECHDC1-212ENST00000461239 SLC10A4Q96EP9 437 aa11.72□□□□□ -0.53
ECHDC1-212ENST00000461239 SLAIN2Q9P270 581 aa11.72□□□□□ -0.53
ECHDC1-212ENST00000461239 ESPNB1AK53 854 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms