RNA–Protein interactions for RNA: ENST00000461217.1

COL16A1-206, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-206ENST00000461217 BRCA1P38398 1863 aaKnown RBP20.3■□□□□ 0.84
COL16A1-206ENST00000461217 UBR2Q8IWV8 1755 aa20.29■□□□□ 0.84
COL16A1-206ENST00000461217 POLRMTO00411 1230 aaKnown RBP20.29■□□□□ 0.84
COL16A1-206ENST00000461217 GNAT3A8MTJ3 354 aa20.28■□□□□ 0.84
COL16A1-206ENST00000461217 CANXP27824 592 aaKnown RBP20.28■□□□□ 0.84
COL16A1-206ENST00000461217 NARFQ9UHQ1 456 aa20.28■□□□□ 0.84
COL16A1-206ENST00000461217 KCNA3P22001 575 aa20.27■□□□□ 0.84
COL16A1-206ENST00000461217 TM4SF1P30408 202 aa20.27■□□□□ 0.84
COL16A1-206ENST00000461217 CHRNA5P30532 468 aa20.27■□□□□ 0.84
COL16A1-206ENST00000461217 DALRD3Q5D0E6 543 aaKnown RBP20.27■□□□□ 0.84
COL16A1-206ENST00000461217 ARFGEF1Q9Y6D6 1849 aa20.26■□□□□ 0.83
COL16A1-206ENST00000461217 STARD3NLO95772 234 aa20.26■□□□□ 0.83
COL16A1-206ENST00000461217 NFIXQ14938 502 aa20.25■□□□□ 0.83
COL16A1-206ENST00000461217 PRKAR2BP31323 418 aa20.24■□□□□ 0.83
COL16A1-206ENST00000461217 IL17REQ8NFR9 667 aa20.24■□□□□ 0.83
COL16A1-206ENST00000461217 NUDCQ9Y266 331 aa20.24■□□□□ 0.83
COL16A1-206ENST00000461217 ZNF330Q9Y3S2 320 aaPredicted RBP20.24■□□□□ 0.83
COL16A1-206ENST00000461217 HEG1Q9ULI3 1381 aa20.23■□□□□ 0.83
COL16A1-206ENST00000461217 KIF3CO14782 793 aa20.23■□□□□ 0.83
COL16A1-206ENST00000461217 ZNF790Q6PG37 636 aa20.23■□□□□ 0.83
COL16A1-206ENST00000461217 ZNF496Q96IT1 587 aaPredicted RBP20.23■□□□□ 0.83
COL16A1-206ENST00000461217 SIPA1L3O60292 1781 aaPredicted RBP20.22■□□□□ 0.83
COL16A1-206ENST00000461217 SERPINB2P05120 415 aa20.22■□□□□ 0.83
COL16A1-206ENST00000461217 HSPA6P17066 643 aa20.22■□□□□ 0.83
COL16A1-206ENST00000461217 C9orf131Q5VYM1 1079 aa20.22■□□□□ 0.83
COL16A1-206ENST00000461217 AFDNP55196 1824 aaKnown RBP20.21■□□□□ 0.83
COL16A1-206ENST00000461217 A0A087WZG4 1122 aa20.21■□□□□ 0.83
COL16A1-206ENST00000461217 BICDL1Q6ZP65 573 aa20.21■□□□□ 0.83
COL16A1-206ENST00000461217 NPM2Q86SE8 214 aaKnown RBP20.21■□□□□ 0.83
COL16A1-206ENST00000461217 FMNL2Q96PY5 1086 aa20.21■□□□□ 0.83
COL16A1-206ENST00000461217 TEX13AQ9BXU3 409 aaPredicted RBP20.21■□□□□ 0.83
COL16A1-206ENST00000461217 RSPH6AQ9H0K4 717 aa20.21■□□□□ 0.83
COL16A1-206ENST00000461217 BCL2L12Q9HB09 334 aa20.21■□□□□ 0.83
COL16A1-206ENST00000461217 NRXN2Q9P2S2 1712 aa20.2■□□□□ 0.82
COL16A1-206ENST00000461217 ZNF316A6NFI3 1004 aaPredicted RBP20.2■□□□□ 0.82
COL16A1-206ENST00000461217 U2AF1L5P0DN76 240 aaPredicted RBP20.2■□□□□ 0.82
COL16A1-206ENST00000461217 U2AF1Q01081 240 aaKnown RBP eCLIP20.2■□□□□ 0.82
COL16A1-206ENST00000461217 PHACTR3Q96KR7 559 aa20.2■□□□□ 0.82
COL16A1-206ENST00000461217 BTBD11A6QL63 1104 aa20.19■□□□□ 0.82
COL16A1-206ENST00000461217 PPP2R1AP30153 589 aa20.19■□□□□ 0.82
COL16A1-206ENST00000461217 EIF5P55010 431 aaKnown RBP20.19■□□□□ 0.82
COL16A1-206ENST00000461217 RNF181Q9P0P0 153 aa20.19■□□□□ 0.82
COL16A1-206ENST00000461217 SCN7AQ01118 1682 aa20.19■□□□□ 0.82
COL16A1-206ENST00000461217 CEMIPQ8WUJ3 1361 aa20.19■□□□□ 0.82
COL16A1-206ENST00000461217 RTF1Q92541 710 aaKnown RBP20.18■□□□□ 0.82
COL16A1-206ENST00000461217 NMRK2Q9NPI5 230 aa20.18■□□□□ 0.82
COL16A1-206ENST00000461217 TOMM70O94826 608 aa20.16■□□□□ 0.82
COL16A1-206ENST00000461217 C2CD5Q86YS7 1000 aa20.16■□□□□ 0.82
COL16A1-206ENST00000461217 TBC1D2BQ9UPU7 963 aa20.16■□□□□ 0.82
COL16A1-206ENST00000461217 CARMIL3Q8ND23 1372 aa20.16■□□□□ 0.82
COL16A1-206ENST00000461217 DLEC1Q9Y238 1755 aa20.16■□□□□ 0.82
COL16A1-206ENST00000461217 H0YIN7 160 aa20.15■□□□□ 0.82
COL16A1-206ENST00000461217 IL6STP40189 918 aaPredicted RBP20.15■□□□□ 0.82
COL16A1-206ENST00000461217 TBC1D9BQ66K14 1250 aa20.15■□□□□ 0.82
COL16A1-206ENST00000461217 C16orf71Q8IYS4 520 aaPredicted RBP20.15■□□□□ 0.82
COL16A1-206ENST00000461217 KDM2BQ8NHM5 1336 aa20.15■□□□□ 0.82
COL16A1-206ENST00000461217 NPHP1O15259 732 aa20.14■□□□□ 0.81
COL16A1-206ENST00000461217 KCNQ3O43525 872 aa20.14■□□□□ 0.81
COL16A1-206ENST00000461217 A1BGP04217 495 aa20.14■□□□□ 0.81
COL16A1-206ENST00000461217 TTLL6Q8N841 843 aa20.14■□□□□ 0.81
COL16A1-206ENST00000461217 RASSF7Q02833 373 aa20.13■□□□□ 0.81
COL16A1-206ENST00000461217 MCM10Q7L590 875 aa20.13■□□□□ 0.81
COL16A1-206ENST00000461217 NEFMP07197 916 aa20.1■□□□□ 0.81
COL16A1-206ENST00000461217 PDE6BP35913 854 aa20.1■□□□□ 0.81
COL16A1-206ENST00000461217 DZIP3Q86Y13 1208 aaKnown RBP20.1■□□□□ 0.81
COL16A1-206ENST00000461217 CCDC24Q8N4L8 307 aa20.1■□□□□ 0.81
COL16A1-206ENST00000461217 ZNF622Q969S3 477 aaKnown RBP eCLIP20.1■□□□□ 0.81
COL16A1-206ENST00000461217 SETDB2Q96T68 719 aa20.1■□□□□ 0.81
COL16A1-206ENST00000461217 TNRC6CQ9HCJ0 1690 aaKnown RBP20.1■□□□□ 0.81
COL16A1-206ENST00000461217 BCORQ6W2J9 1755 aa20.09■□□□□ 0.81
COL16A1-206ENST00000461217 PIP4K2AP48426 406 aaPredicted RBP20.09■□□□□ 0.81
COL16A1-206ENST00000461217 APLP1P51693 650 aa20.09■□□□□ 0.81
COL16A1-206ENST00000461217 DCTN1Q14203 1278 aa20.09■□□□□ 0.81
COL16A1-206ENST00000461217 PRR5LQ6MZQ0 368 aa20.09■□□□□ 0.81
COL16A1-206ENST00000461217 CNBD1Q8NA66 436 aa20.09■□□□□ 0.81
COL16A1-206ENST00000461217 USP16Q9Y5T5 823 aa20.09■□□□□ 0.81
COL16A1-206ENST00000461217 SBF1O95248 1867 aa20.09■□□□□ 0.81
COL16A1-206ENST00000461217 ANKRD31Q8N7Z5 1873 aa20.08■□□□□ 0.81
COL16A1-206ENST00000461217 PRAMEF22A3QJZ6 481 aa20.08■□□□□ 0.81
COL16A1-206ENST00000461217 CAMTA2O94983 1202 aa20.08■□□□□ 0.81
COL16A1-206ENST00000461217 SNRPA1P09661 255 aaKnown RBP20.08■□□□□ 0.81
COL16A1-206ENST00000461217 LMNB1P20700 586 aa20.08■□□□□ 0.81
COL16A1-206ENST00000461217 BRIP1Q9BX63 1249 aa20.08■□□□□ 0.81
COL16A1-206ENST00000461217 PDZRN3Q9UPQ7 1066 aa20.08■□□□□ 0.81
COL16A1-206ENST00000461217 ZC3H4Q9UPT8 1303 aaKnown RBP20.07■□□□□ 0.8
COL16A1-206ENST00000461217 ST5P78524 1137 aa20.07■□□□□ 0.8
COL16A1-206ENST00000461217 RBM46Q8TBY0 533 aaKnown RBP20.07■□□□□ 0.8
COL16A1-206ENST00000461217 RRAGCQ9HB90 399 aa20.07■□□□□ 0.8
COL16A1-206ENST00000461217 ZNF219Q9P2Y4 722 aaPredicted RBP20.07■□□□□ 0.8
COL16A1-206ENST00000461217 COL11A2P13942 1736 aaPredicted RBP20.07■□□□□ 0.8
COL16A1-206ENST00000461217 HTATSF1O43719 755 aaKnown RBP20.06■□□□□ 0.8
COL16A1-206ENST00000461217 TIAM2Q8IVF5 1701 aa20.06■□□□□ 0.8
COL16A1-206ENST00000461217 ZNF652Q9Y2D9 606 aa20.05■□□□□ 0.8
COL16A1-206ENST00000461217 NFKBIEO00221 500 aa20.03■□□□□ 0.8
COL16A1-206ENST00000461217 C21orf2O43822 256 aa20.03■□□□□ 0.8
COL16A1-206ENST00000461217 TAF7Q15545 349 aaPredicted RBP20.03■□□□□ 0.8
COL16A1-206ENST00000461217 WDR90Q96KV7 1748 aa20.02■□□□□ 0.8
COL16A1-206ENST00000461217 PRELPP51888 382 aa20.02■□□□□ 0.8
COL16A1-206ENST00000461217 FSTL1Q12841 308 aa20.02■□□□□ 0.8
COL16A1-206ENST00000461217 NBPF5PQ86XG9 351 aaPredicted RBP20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms