RNA–Protein interactions for RNA: ENST00000461194.5

NUP50-212, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-212ENST00000461194 LYPD8Q6UX82 237 aa9.94□□□□□ -0.82
NUP50-212ENST00000461194 LRRN4Q8WUT4 740 aa9.94□□□□□ -0.82
NUP50-212ENST00000461194 PRAM1Q96QH2 718 aa9.94□□□□□ -0.82
NUP50-212ENST00000461194 AHDC1Q5TGY3 1603 aaPredicted RBP9.93□□□□□ -0.82
NUP50-212ENST00000461194 MED1Q15648 1581 aaPredicted RBP9.93□□□□□ -0.82
NUP50-212ENST00000461194 DXOO77932 396 aaKnown RBP9.93□□□□□ -0.82
NUP50-212ENST00000461194 L3MBTL2Q969R5 705 aa9.93□□□□□ -0.82
NUP50-212ENST00000461194 ORAI2Q96SN7 254 aa9.93□□□□□ -0.82
NUP50-212ENST00000461194 PLA2G2EQ9NZK7 142 aa9.93□□□□□ -0.82
NUP50-212ENST00000461194 TRAK1Q9UPV9 953 aa9.93□□□□□ -0.82
NUP50-212ENST00000461194 KNDC1Q76NI1 1749 aa9.93□□□□□ -0.82
NUP50-212ENST00000461194 CDC42BPGQ6DT37 1551 aa9.92□□□□□ -0.82
NUP50-212ENST00000461194 DLC1Q96QB1 1528 aa9.92□□□□□ -0.82
NUP50-212ENST00000461194 MMP16P51512 607 aa9.92□□□□□ -0.82
NUP50-212ENST00000461194 FLIIQ13045 1269 aa9.92□□□□□ -0.82
NUP50-212ENST00000461194 NEUROD1Q13562 356 aa9.92□□□□□ -0.82
NUP50-212ENST00000461194 POGKQ9P215 609 aa9.92□□□□□ -0.82
NUP50-212ENST00000461194 COL16A1Q07092 1604 aaPredicted RBP9.92□□□□□ -0.82
NUP50-212ENST00000461194 PHLPP1O60346 1717 aa9.91□□□□□ -0.82
NUP50-212ENST00000461194 SPATA31A6Q5VVP1 1343 aa9.91□□□□□ -0.82
NUP50-212ENST00000461194 PPEF1O14829 653 aaPredicted RBP9.91□□□□□ -0.82
NUP50-212ENST00000461194 SAFB2Q14151 953 aaKnown RBP eCLIP9.91□□□□□ -0.82
NUP50-212ENST00000461194 ESCO1Q5FWF5 840 aa9.91□□□□□ -0.82
NUP50-212ENST00000461194 ILDR2Q71H61 639 aa9.91□□□□□ -0.82
NUP50-212ENST00000461194 CCDC24Q8N4L8 307 aa9.91□□□□□ -0.82
NUP50-212ENST00000461194 DDX17Q92841 729 aaKnown RBP9.91□□□□□ -0.82
NUP50-212ENST00000461194 LRRC59Q96AG4 307 aaKnown RBP9.91□□□□□ -0.82
NUP50-212ENST00000461194 SOS2Q07890 1332 aaPredicted RBP9.9□□□□□ -0.82
NUP50-212ENST00000461194 CTHP32929 405 aa9.89□□□□□ -0.83
NUP50-212ENST00000461194 GGCXP38435 758 aa9.89□□□□□ -0.83
NUP50-212ENST00000461194 MCM6Q14566 821 aa9.89□□□□□ -0.83
NUP50-212ENST00000461194 PTPRNQ16849 979 aa9.89□□□□□ -0.83
NUP50-212ENST00000461194 NBPF1Q3BBV0 1214 aa9.89□□□□□ -0.83
NUP50-212ENST00000461194 PPP1R18Q6NYC8 613 aa9.89□□□□□ -0.83
NUP50-212ENST00000461194 HMX1Q9NP08 348 aaPredicted RBP9.89□□□□□ -0.83
NUP50-212ENST00000461194 NPHP3Q7Z494 1330 aa9.88□□□□□ -0.83
NUP50-212ENST00000461194 FOXO3O43524 673 aa9.88□□□□□ -0.83
NUP50-212ENST00000461194 MTMR14Q8NCE2 650 aa9.88□□□□□ -0.83
NUP50-212ENST00000461194 NUDT12Q9BQG2 462 aa9.88□□□□□ -0.83
NUP50-212ENST00000461194 NHSL1Q5SYE7 1610 aa9.87□□□□□ -0.83
NUP50-212ENST00000461194 RNF223E7ERA6 249 aa9.87□□□□□ -0.83
NUP50-212ENST00000461194 CCNYL3P0C7X3 344 aa9.87□□□□□ -0.83
NUP50-212ENST00000461194 HIRIP3Q9BW71 556 aaPredicted RBP9.87□□□□□ -0.83
NUP50-212ENST00000461194 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.87□□□□□ -0.83
NUP50-212ENST00000461194 EVA1BQ9NVM1 165 aa9.87□□□□□ -0.83
NUP50-212ENST00000461194 RGS17Q9UGC6 210 aaPredicted RBP9.87□□□□□ -0.83
NUP50-212ENST00000461194 FCF1Q9Y324 198 aaKnown RBP9.87□□□□□ -0.83
NUP50-212ENST00000461194 WASLO00401 505 aaPredicted RBP9.86□□□□□ -0.83
NUP50-212ENST00000461194 NR6A1Q15406 480 aa9.86□□□□□ -0.83
NUP50-212ENST00000461194 ANKARQ7Z5J8 1434 aa9.86□□□□□ -0.83
NUP50-212ENST00000461194 EPS8L1Q8TE68 723 aa9.86□□□□□ -0.83
NUP50-212ENST00000461194 MAP10Q9P2G4 905 aa9.86□□□□□ -0.83
NUP50-212ENST00000461194 EIF3AQ14152 1382 aaKnown RBP9.86□□□□□ -0.83
NUP50-212ENST00000461194 PNPLA6Q8IY17 1366 aa9.86□□□□□ -0.83
NUP50-212ENST00000461194 KIAA1210Q9ULL0 1709 aa9.85□□□□□ -0.83
NUP50-212ENST00000461194 ADGRB2O60241 1585 aa9.85□□□□□ -0.83
NUP50-212ENST00000461194 IFFO2Q5TF58 517 aa9.85□□□□□ -0.83
NUP50-212ENST00000461194 LRP6O75581 1613 aa9.85□□□□□ -0.83
NUP50-212ENST00000461194 FMN2Q9NZ56 1722 aa9.85□□□□□ -0.83
NUP50-212ENST00000461194 SHPRHQ149N8 1683 aa9.84□□□□□ -0.83
NUP50-212ENST00000461194 XPCQ01831 940 aaPredicted RBP9.84□□□□□ -0.83
NUP50-212ENST00000461194 KCNH2Q12809 1159 aa9.84□□□□□ -0.83
NUP50-212ENST00000461194 MEX3CQ5U5Q3 659 aaKnown RBP9.84□□□□□ -0.83
NUP50-212ENST00000461194 PTCRAQ6ISU1 281 aaPredicted RBP9.84□□□□□ -0.83
NUP50-212ENST00000461194 PCGF6Q9BYE7 350 aa9.84□□□□□ -0.83
NUP50-212ENST00000461194 TONSLQ96HA7 1378 aa9.84□□□□□ -0.83
NUP50-212ENST00000461194 PXDNQ92626 1479 aa9.84□□□□□ -0.83
NUP50-212ENST00000461194 PRR36Q9H6K5 1346 aa9.83□□□□□ -0.84
NUP50-212ENST00000461194 APBB1O00213 710 aa9.83□□□□□ -0.84
NUP50-212ENST00000461194 NBPF8Q3BBV2 869 aa9.83□□□□□ -0.84
NUP50-212ENST00000461194 KRT28Q7Z3Y7 464 aa9.83□□□□□ -0.84
NUP50-212ENST00000461194 GJD4Q96KN9 370 aaPredicted RBP9.83□□□□□ -0.84
NUP50-212ENST00000461194 TRIM34Q9BYJ4 488 aa9.83□□□□□ -0.84
NUP50-212ENST00000461194 ROCK2O75116 1388 aaKnown RBP9.83□□□□□ -0.84
NUP50-212ENST00000461194 CENPJQ9HC77 1338 aaPredicted RBP9.82□□□□□ -0.84
NUP50-212ENST00000461194 F12P00748 615 aaPredicted RBP9.82□□□□□ -0.84
NUP50-212ENST00000461194 PSME1Q06323 249 aa9.82□□□□□ -0.84
NUP50-212ENST00000461194 POTEAQ6S8J7 498 aa9.82□□□□□ -0.84
NUP50-212ENST00000461194 ANKLE1Q8NAG6 615 aa9.82□□□□□ -0.84
NUP50-212ENST00000461194 PMFBP1Q8TBY8 1022 aa9.82□□□□□ -0.84
NUP50-212ENST00000461194 CDK19Q9BWU1 502 aa9.82□□□□□ -0.84
NUP50-212ENST00000461194 TULP4Q9NRJ4 1543 aa9.82□□□□□ -0.84
NUP50-212ENST00000461194 SPATA31A3Q5VYP0 1347 aa9.82□□□□□ -0.84
NUP50-212ENST00000461194 GPRASP1Q5JY77 1395 aa9.81□□□□□ -0.84
NUP50-212ENST00000461194 SOCS7O14512 581 aa9.81□□□□□ -0.84
NUP50-212ENST00000461194 RAD21O60216 631 aa9.81□□□□□ -0.84
NUP50-212ENST00000461194 ZNF772Q68DY9 489 aaPredicted RBP9.81□□□□□ -0.84
NUP50-212ENST00000461194 NUDT16Q96DE0 195 aaKnown RBP9.81□□□□□ -0.84
NUP50-212ENST00000461194 POM121Q96HA1 1249 aa9.81□□□□□ -0.84
NUP50-212ENST00000461194 GDPD2Q9HCC8 539 aa9.81□□□□□ -0.84
NUP50-212ENST00000461194 PRM3Q9NNZ6 103 aa9.81□□□□□ -0.84
NUP50-212ENST00000461194 ARHGEF28Q8N1W1 1705 aaKnown RBP9.81□□□□□ -0.84
NUP50-212ENST00000461194 KIF1AQ12756 1690 aa9.8□□□□□ -0.84
NUP50-212ENST00000461194 SBNO1A3KN83 1393 aa9.8□□□□□ -0.84
NUP50-212ENST00000461194 PLA2G2CQ5R387 149 aa9.8□□□□□ -0.84
NUP50-212ENST00000461194 CLUAP1Q96AJ1 413 aa9.8□□□□□ -0.84
NUP50-212ENST00000461194 TBC1D2BQ9UPU7 963 aa9.8□□□□□ -0.84
NUP50-212ENST00000461194 CLSPNQ9HAW4 1339 aa9.8□□□□□ -0.84
NUP50-212ENST00000461194 USP32Q8NFA0 1604 aa9.79□□□□□ -0.84
NUP50-212ENST00000461194 ZBTB24O43167 697 aaPredicted RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms