RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 C9orf131Q5VYM1 1079 aa24.65■■□□□ 1.54
COL9A2-205ENST00000461118 PIM2Q9P1W9 311 aa24.65■■□□□ 1.54
COL9A2-205ENST00000461118 NUDCQ9Y266 331 aa24.65■■□□□ 1.54
COL9A2-205ENST00000461118 TNRC6CQ9HCJ0 1690 aaKnown RBP24.65■■□□□ 1.54
COL9A2-205ENST00000461118 TM4SF1P30408 202 aa24.64■■□□□ 1.54
COL9A2-205ENST00000461118 UBR2Q8IWV8 1755 aa24.63■■□□□ 1.53
COL9A2-205ENST00000461118 KCPQ6ZWJ8 1503 aa24.63■■□□□ 1.53
COL9A2-205ENST00000461118 POLRMTO00411 1230 aaKnown RBP24.63■■□□□ 1.53
COL9A2-205ENST00000461118 MTHFSDQ2M296 383 aaKnown RBP24.63■■□□□ 1.53
COL9A2-205ENST00000461118 CCDC88AQ3V6T2 1871 aa24.63■■□□□ 1.53
COL9A2-205ENST00000461118 CHRNA5P30532 468 aa24.62■■□□□ 1.53
COL9A2-205ENST00000461118 RALBP1Q15311 655 aa24.6■■□□□ 1.53
COL9A2-205ENST00000461118 DALRD3Q5D0E6 543 aaKnown RBP24.6■■□□□ 1.53
COL9A2-205ENST00000461118 DNAJC10Q8IXB1 793 aa24.6■■□□□ 1.53
COL9A2-205ENST00000461118 RBM46Q8TBY0 533 aaKnown RBP24.6■■□□□ 1.53
COL9A2-205ENST00000461118 LGR6Q9HBX8 967 aa24.6■■□□□ 1.53
COL9A2-205ENST00000461118 SOS1Q07889 1333 aaPredicted RBP24.6■■□□□ 1.53
COL9A2-205ENST00000461118 RSPH6AQ9H0K4 717 aa24.59■■□□□ 1.53
COL9A2-205ENST00000461118 SLC52A2Q9HAB3 445 aa24.59■■□□□ 1.53
COL9A2-205ENST00000461118 USPL1Q5W0Q7 1092 aa24.58■■□□□ 1.53
COL9A2-205ENST00000461118 RNMTO43148 476 aaKnown RBP24.57■■□□□ 1.52
COL9A2-205ENST00000461118 U2AF1L5P0DN76 240 aaPredicted RBP24.57■■□□□ 1.52
COL9A2-205ENST00000461118 CYP19A1P11511 503 aaPredicted RBP24.57■■□□□ 1.52
COL9A2-205ENST00000461118 U2AF1Q01081 240 aaKnown RBP eCLIP24.57■■□□□ 1.52
COL9A2-205ENST00000461118 GAS2L2Q8NHY3 880 aa24.57■■□□□ 1.52
COL9A2-205ENST00000461118 RNF181Q9P0P0 153 aa24.56■■□□□ 1.52
COL9A2-205ENST00000461118 PRKAR2BP31323 418 aa24.55■■□□□ 1.52
COL9A2-205ENST00000461118 HTRA3P83110 453 aa24.55■■□□□ 1.52
COL9A2-205ENST00000461118 SLC39A6Q13433 755 aa24.55■■□□□ 1.52
COL9A2-205ENST00000461118 BCL2L12Q9HB09 334 aa24.55■■□□□ 1.52
COL9A2-205ENST00000461118 ANKRD31Q8N7Z5 1873 aa24.55■■□□□ 1.52
COL9A2-205ENST00000461118 PHACTR3Q96KR7 559 aa24.54■■□□□ 1.52
COL9A2-205ENST00000461118 TIAM2Q8IVF5 1701 aa24.54■■□□□ 1.52
COL9A2-205ENST00000461118 SIPA1L3O60292 1781 aaPredicted RBP24.53■■□□□ 1.52
COL9A2-205ENST00000461118 PRELPP51888 382 aa24.53■■□□□ 1.52
COL9A2-205ENST00000461118 NFIXQ14938 502 aa24.53■■□□□ 1.52
COL9A2-205ENST00000461118 NARFQ9UHQ1 456 aa24.53■■□□□ 1.52
COL9A2-205ENST00000461118 COL15A1P39059 1388 aa24.53■■□□□ 1.52
COL9A2-205ENST00000461118 GNAT3A8MTJ3 354 aa24.52■■□□□ 1.52
COL9A2-205ENST00000461118 ZPR1O75312 459 aa24.52■■□□□ 1.52
COL9A2-205ENST00000461118 FSTL1Q12841 308 aa24.52■■□□□ 1.52
COL9A2-205ENST00000461118 RRAGCQ9HB90 399 aa24.52■■□□□ 1.52
COL9A2-205ENST00000461118 ZBTB1Q9Y2K1 713 aa24.52■■□□□ 1.52
COL9A2-205ENST00000461118 KDM2BQ8NHM5 1336 aa24.52■■□□□ 1.52
COL9A2-205ENST00000461118 RASSF7Q02833 373 aa24.5■■□□□ 1.51
COL9A2-205ENST00000461118 PCNTO95613 3336 aa24.5■■□□□ 1.51
COL9A2-205ENST00000461118 DICER1Q9UPY3 1922 aaKnown RBP24.49■■□□□ 1.51
COL9A2-205ENST00000461118 JMYQ8N9B5 988 aa24.49■■□□□ 1.51
COL9A2-205ENST00000461118 IL17REQ8NFR9 667 aa24.49■■□□□ 1.51
COL9A2-205ENST00000461118 CARMIL3Q8ND23 1372 aa24.49■■□□□ 1.51
COL9A2-205ENST00000461118 COL11A2P13942 1736 aaPredicted RBP24.48■■□□□ 1.51
COL9A2-205ENST00000461118 SCN7AQ01118 1682 aa24.48■■□□□ 1.51
COL9A2-205ENST00000461118 C16orf71Q8IYS4 520 aaPredicted RBP24.48■■□□□ 1.51
COL9A2-205ENST00000461118 KLRG1Q96E93 195 aa24.48■■□□□ 1.51
COL9A2-205ENST00000461118 FER1L6Q2WGJ9 1857 aa24.47■■□□□ 1.51
COL9A2-205ENST00000461118 MYBBP1AQ9BQG0 1328 aaKnown RBP24.47■■□□□ 1.51
COL9A2-205ENST00000461118 VSIG10Q8N0Z9 540 aa24.47■■□□□ 1.51
COL9A2-205ENST00000461118 ZC3H4Q9UPT8 1303 aaKnown RBP24.46■■□□□ 1.51
COL9A2-205ENST00000461118 SERPINB2P05120 415 aa24.46■■□□□ 1.51
COL9A2-205ENST00000461118 CEMIPQ8WUJ3 1361 aa24.45■■□□□ 1.5
COL9A2-205ENST00000461118 EIF5P55010 431 aaKnown RBP24.43■■□□□ 1.5
COL9A2-205ENST00000461118 TEFQ10587 303 aa24.43■■□□□ 1.5
COL9A2-205ENST00000461118 PRKRIP1Q9H875 184 aaPredicted RBP24.43■■□□□ 1.5
COL9A2-205ENST00000461118 CACNA1SQ13698 1873 aa24.43■■□□□ 1.5
COL9A2-205ENST00000461118 HTATSF1O43719 755 aaKnown RBP24.42■■□□□ 1.5
COL9A2-205ENST00000461118 LMNB1P20700 586 aa24.42■■□□□ 1.5
COL9A2-205ENST00000461118 PLEKHF1Q96S99 279 aa24.42■■□□□ 1.5
COL9A2-205ENST00000461118 PNNQ9H307 717 aaKnown RBP24.42■■□□□ 1.5
COL9A2-205ENST00000461118 GLTPD2A6NH11 291 aa24.41■■□□□ 1.5
COL9A2-205ENST00000461118 NFKBIEO00221 500 aa24.41■■□□□ 1.5
COL9A2-205ENST00000461118 TTLL6Q8N841 843 aa24.41■■□□□ 1.5
COL9A2-205ENST00000461118 BCORQ6W2J9 1755 aa24.4■■□□□ 1.5
COL9A2-205ENST00000461118 ZNF316A6NFI3 1004 aaPredicted RBP24.4■■□□□ 1.5
COL9A2-205ENST00000461118 NEFMP07197 916 aa24.4■■□□□ 1.5
COL9A2-205ENST00000461118 CANXP27824 592 aaKnown RBP24.4■■□□□ 1.5
COL9A2-205ENST00000461118 C2CD5Q86YS7 1000 aa24.4■■□□□ 1.5
COL9A2-205ENST00000461118 SMC1BQ8NDV3 1235 aa24.4■■□□□ 1.5
COL9A2-205ENST00000461118 ARFGEF2Q9Y6D5 1785 aa24.39■■□□□ 1.5
COL9A2-205ENST00000461118 COL13A1Q5TAT6 717 aaPredicted RBP24.39■■□□□ 1.49
COL9A2-205ENST00000461118 RTF1Q92541 710 aaKnown RBP24.39■■□□□ 1.49
COL9A2-205ENST00000461118 POTECB2RU33 542 aa24.38■■□□□ 1.49
COL9A2-205ENST00000461118 SLX4Q8IY92 1834 aa24.38■■□□□ 1.49
COL9A2-205ENST00000461118 TBC1D9BQ66K14 1250 aa24.37■■□□□ 1.49
COL9A2-205ENST00000461118 ZNF790Q6PG37 636 aa24.37■■□□□ 1.49
COL9A2-205ENST00000461118 ZNF496Q96IT1 587 aaPredicted RBP24.37■■□□□ 1.49
COL9A2-205ENST00000461118 VEGFAP15692 232 aaPredicted RBP24.36■■□□□ 1.49
COL9A2-205ENST00000461118 BICDL1Q6ZP65 573 aa24.36■■□□□ 1.49
COL9A2-205ENST00000461118 TTC5Q8N0Z6 440 aa24.36■■□□□ 1.49
COL9A2-205ENST00000461118 HEG1Q9ULI3 1381 aa24.36■■□□□ 1.49
COL9A2-205ENST00000461118 H0YIN7 160 aa24.35■■□□□ 1.49
COL9A2-205ENST00000461118 MCM10Q7L590 875 aa24.35■■□□□ 1.49
COL9A2-205ENST00000461118 STARD3NLO95772 234 aa24.33■■□□□ 1.49
COL9A2-205ENST00000461118 NFE2L2Q16236 605 aa24.33■■□□□ 1.49
COL9A2-205ENST00000461118 PRR5LQ6MZQ0 368 aa24.33■■□□□ 1.49
COL9A2-205ENST00000461118 A0A087WZG4 1122 aa24.32■■□□□ 1.48
COL9A2-205ENST00000461118 BTBD11A6QL63 1104 aa24.32■■□□□ 1.48
COL9A2-205ENST00000461118 BRIP1Q9BX63 1249 aa24.32■■□□□ 1.48
COL9A2-205ENST00000461118 MAPK8IP3Q9UPT6 1336 aa24.32■■□□□ 1.48
COL9A2-205ENST00000461118 DCTN1Q14203 1278 aa24.31■■□□□ 1.48
COL9A2-205ENST00000461118 CCDC24Q8N4L8 307 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms