RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 SOS1Q07889 1333 aaPredicted RBP17.46■□□□□ 0.38
RAB11FIP3-207ENST00000461009 ADAMTS7Q9UKP4 1686 aa17.45■□□□□ 0.38
RAB11FIP3-207ENST00000461009 FKBP8Q14318 412 aa17.45■□□□□ 0.38
RAB11FIP3-207ENST00000461009 ADAMTS8Q9UP79 889 aa17.45■□□□□ 0.38
RAB11FIP3-207ENST00000461009 UTRNP46939 3433 aa17.44■□□□□ 0.38
RAB11FIP3-207ENST00000461009 KCPQ6ZWJ8 1503 aa17.44■□□□□ 0.38
RAB11FIP3-207ENST00000461009 CANXP27824 592 aaKnown RBP17.44■□□□□ 0.38
RAB11FIP3-207ENST00000461009 NFE2L2Q16236 605 aa17.44■□□□□ 0.38
RAB11FIP3-207ENST00000461009 USPL1Q5W0Q7 1092 aa17.44■□□□□ 0.38
RAB11FIP3-207ENST00000461009 RUNDC1Q96C34 613 aa17.44■□□□□ 0.38
RAB11FIP3-207ENST00000461009 NARFQ9UHQ1 456 aa17.44■□□□□ 0.38
RAB11FIP3-207ENST00000461009 WWC3Q9ULE0 1092 aa17.44■□□□□ 0.38
RAB11FIP3-207ENST00000461009 ZNF496Q96IT1 587 aaPredicted RBP17.43■□□□□ 0.38
RAB11FIP3-207ENST00000461009 MRS2Q9HD23 443 aa17.43■□□□□ 0.38
RAB11FIP3-207ENST00000461009 ZBTB1Q9Y2K1 713 aa17.43■□□□□ 0.38
RAB11FIP3-207ENST00000461009 C4AP0C0L4 1744 aa17.43■□□□□ 0.38
RAB11FIP3-207ENST00000461009 COL15A1P39059 1388 aa17.42■□□□□ 0.38
RAB11FIP3-207ENST00000461009 CEMIPQ8WUJ3 1361 aa17.42■□□□□ 0.38
RAB11FIP3-207ENST00000461009 HEG1Q9ULI3 1381 aa17.42■□□□□ 0.38
RAB11FIP3-207ENST00000461009 A0A0G2JLW4 131 aa17.42■□□□□ 0.38
RAB11FIP3-207ENST00000461009 BCS1LQ9Y276 419 aa17.42■□□□□ 0.38
RAB11FIP3-207ENST00000461009 C10orf71Q711Q0 1435 aa17.41■□□□□ 0.38
RAB11FIP3-207ENST00000461009 GIGYF1O75420 1035 aaPredicted RBP17.4■□□□□ 0.38
RAB11FIP3-207ENST00000461009 DPEP1P16444 411 aa17.4■□□□□ 0.38
RAB11FIP3-207ENST00000461009 TM4SF1P30408 202 aa17.4■□□□□ 0.38
RAB11FIP3-207ENST00000461009 RIPK4P57078 832 aa17.4■□□□□ 0.38
RAB11FIP3-207ENST00000461009 LMOD3Q0VAK6 560 aa17.4■□□□□ 0.38
RAB11FIP3-207ENST00000461009 PIM2Q9P1W9 311 aa17.4■□□□□ 0.38
RAB11FIP3-207ENST00000461009 DLG5Q8TDM6 1919 aa17.4■□□□□ 0.38
RAB11FIP3-207ENST00000461009 PXDNLA1KZ92 1463 aa17.39■□□□□ 0.37
RAB11FIP3-207ENST00000461009 UBR2Q8IWV8 1755 aa17.39■□□□□ 0.37
RAB11FIP3-207ENST00000461009 TMPOP42166 694 aaKnown RBP17.39■□□□□ 0.37
RAB11FIP3-207ENST00000461009 CCDC184Q52MB2 194 aa17.39■□□□□ 0.37
RAB11FIP3-207ENST00000461009 MCM10Q7L590 875 aa17.39■□□□□ 0.37
RAB11FIP3-207ENST00000461009 CCDC146Q8IYE0 955 aa17.39■□□□□ 0.37
RAB11FIP3-207ENST00000461009 ZNF330Q9Y3S2 320 aaPredicted RBP17.39■□□□□ 0.37
RAB11FIP3-207ENST00000461009 KIF13BQ9NQT8 1826 aa17.39■□□□□ 0.37
RAB11FIP3-207ENST00000461009 POLRMTO00411 1230 aaKnown RBP17.38■□□□□ 0.37
RAB11FIP3-207ENST00000461009 IL6STP40189 918 aaPredicted RBP17.38■□□□□ 0.37
RAB11FIP3-207ENST00000461009 EIF5P55010 431 aaKnown RBP17.38■□□□□ 0.37
RAB11FIP3-207ENST00000461009 DDR1Q08345 913 aa17.38■□□□□ 0.37
RAB11FIP3-207ENST00000461009 SNRPA1P09661 255 aaKnown RBP17.37■□□□□ 0.37
RAB11FIP3-207ENST00000461009 DCTN1Q14203 1278 aa17.37■□□□□ 0.37
RAB11FIP3-207ENST00000461009 NFIXQ14938 502 aa17.37■□□□□ 0.37
RAB11FIP3-207ENST00000461009 TAF7Q15545 349 aaPredicted RBP17.37■□□□□ 0.37
RAB11FIP3-207ENST00000461009 DALRD3Q5D0E6 543 aaKnown RBP17.37■□□□□ 0.37
RAB11FIP3-207ENST00000461009 ARHGAP27Q6ZUM4 889 aa17.37■□□□□ 0.37
RAB11FIP3-207ENST00000461009 PNISRQ8TF01 805 aaKnown RBP17.37■□□□□ 0.37
RAB11FIP3-207ENST00000461009 GOLGB1Q14789 3259 aaKnown RBP17.37■□□□□ 0.37
RAB11FIP3-207ENST00000461009 C1QTNF8P60827 252 aa17.36■□□□□ 0.37
RAB11FIP3-207ENST00000461009 NEUROD2Q15784 382 aa17.36■□□□□ 0.37
RAB11FIP3-207ENST00000461009 GPBP1L1Q9HC44 474 aaPredicted RBP17.36■□□□□ 0.37
RAB11FIP3-207ENST00000461009 SIPA1L3O60292 1781 aaPredicted RBP17.35■□□□□ 0.37
RAB11FIP3-207ENST00000461009 N4BP2Q86UW6 1770 aaPredicted RBP17.35■□□□□ 0.37
RAB11FIP3-207ENST00000461009 SERPINB2P05120 415 aa17.35■□□□□ 0.37
RAB11FIP3-207ENST00000461009 DIEXFQ68CQ4 756 aaKnown RBP17.35■□□□□ 0.37
RAB11FIP3-207ENST00000461009 NPHP1O15259 732 aa17.34■□□□□ 0.37
RAB11FIP3-207ENST00000461009 KCNQ3O43525 872 aa17.34■□□□□ 0.37
RAB11FIP3-207ENST00000461009 A1BGP04217 495 aa17.34■□□□□ 0.37
RAB11FIP3-207ENST00000461009 BICDL1Q6ZP65 573 aa17.34■□□□□ 0.37
RAB11FIP3-207ENST00000461009 ATP10DQ9P241 1426 aa17.34■□□□□ 0.37
RAB11FIP3-207ENST00000461009 TBC1D2BQ9UPU7 963 aa17.33■□□□□ 0.36
RAB11FIP3-207ENST00000461009 RRP7AQ9Y3A4 280 aaKnown RBP17.33■□□□□ 0.36
RAB11FIP3-207ENST00000461009 KCNA3P22001 575 aa17.32■□□□□ 0.36
RAB11FIP3-207ENST00000461009 SETDB2Q96T68 719 aa17.32■□□□□ 0.36
RAB11FIP3-207ENST00000461009 BCL2L12Q9HB09 334 aa17.32■□□□□ 0.36
RAB11FIP3-207ENST00000461009 PDZRN3Q9UPQ7 1066 aa17.32■□□□□ 0.36
RAB11FIP3-207ENST00000461009 USP16Q9Y5T5 823 aa17.32■□□□□ 0.36
RAB11FIP3-207ENST00000461009 H0YIN7 160 aa17.31■□□□□ 0.36
RAB11FIP3-207ENST00000461009 APAF1O14727 1248 aa17.31■□□□□ 0.36
RAB11FIP3-207ENST00000461009 CHRNA5P30532 468 aa17.31■□□□□ 0.36
RAB11FIP3-207ENST00000461009 DZIP3Q86Y13 1208 aaKnown RBP17.31■□□□□ 0.36
RAB11FIP3-207ENST00000461009 ZNF526Q8TF50 670 aaPredicted RBP17.31■□□□□ 0.36
RAB11FIP3-207ENST00000461009 ZNF652Q9Y2D9 606 aa17.31■□□□□ 0.36
RAB11FIP3-207ENST00000461009 TBC1D9BQ66K14 1250 aa17.3■□□□□ 0.36
RAB11FIP3-207ENST00000461009 BABAM1Q9NWV8 329 aa17.3■□□□□ 0.36
RAB11FIP3-207ENST00000461009 KIAA1551Q9HCM1 1747 aa17.3■□□□□ 0.36
RAB11FIP3-207ENST00000461009 CARMIL3Q8ND23 1372 aa17.29■□□□□ 0.36
RAB11FIP3-207ENST00000461009 CCER2I3L3R5 266 aa17.29■□□□□ 0.36
RAB11FIP3-207ENST00000461009 PDE6BP35913 854 aa17.29■□□□□ 0.36
RAB11FIP3-207ENST00000461009 C2CD5Q86YS7 1000 aa17.29■□□□□ 0.36
RAB11FIP3-207ENST00000461009 FAM9BQ8IZU0 186 aa17.29■□□□□ 0.36
RAB11FIP3-207ENST00000461009 THUMPD2Q9BTF0 503 aaKnown RBP17.29■□□□□ 0.36
RAB11FIP3-207ENST00000461009 ADCY9O60503 1353 aa17.28■□□□□ 0.36
RAB11FIP3-207ENST00000461009 SENP3-EIF4A1A0A087X0R7 540 aa17.28■□□□□ 0.36
RAB11FIP3-207ENST00000461009 ST5P78524 1137 aa17.28■□□□□ 0.36
RAB11FIP3-207ENST00000461009 CALD1Q05682 793 aaKnown RBP17.28■□□□□ 0.36
RAB11FIP3-207ENST00000461009 CLEC4GQ6UXB4 293 aa17.28■□□□□ 0.36
RAB11FIP3-207ENST00000461009 TTLL6Q8N841 843 aa17.28■□□□□ 0.36
RAB11FIP3-207ENST00000461009 MIS18AQ9NYP9 233 aa17.28■□□□□ 0.36
RAB11FIP3-207ENST00000461009 TRIM35Q9UPQ4 493 aa17.28■□□□□ 0.36
RAB11FIP3-207ENST00000461009 CAMTA2O94983 1202 aa17.27■□□□□ 0.36
RAB11FIP3-207ENST00000461009 BRIP1Q9BX63 1249 aa17.27■□□□□ 0.36
RAB11FIP3-207ENST00000461009 PRAMEF22A3QJZ6 481 aa17.26■□□□□ 0.35
RAB11FIP3-207ENST00000461009 CNBD1Q8NA66 436 aa17.26■□□□□ 0.35
RAB11FIP3-207ENST00000461009 TSPYL4Q9UJ04 414 aa17.26■□□□□ 0.35
RAB11FIP3-207ENST00000461009 BRCA1P38398 1863 aaKnown RBP17.26■□□□□ 0.35
RAB11FIP3-207ENST00000461009 AFDNP55196 1824 aaKnown RBP17.26■□□□□ 0.35
RAB11FIP3-207ENST00000461009 RGL2O15211 777 aa17.25■□□□□ 0.35
RAB11FIP3-207ENST00000461009 PIP4K2AP48426 406 aaPredicted RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms