RNA–Protein interactions for RNA: ENST00000460992.1

PTPN18-206, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 398 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-206ENST00000460992 ITPK1Q13572 414 aa9.91□□□□□ -0.82
PTPN18-206ENST00000460992 PDE3AQ14432 1141 aa9.91□□□□□ -0.82
PTPN18-206ENST00000460992 NFE2L2Q16236 605 aa9.91□□□□□ -0.82
PTPN18-206ENST00000460992 NFATC2IPQ8NCF5 419 aa9.91□□□□□ -0.82
PTPN18-206ENST00000460992 LINC00116Q8NCU8 138 aa9.91□□□□□ -0.82
PTPN18-206ENST00000460992 IL17REQ8NFR9 667 aa9.91□□□□□ -0.82
PTPN18-206ENST00000460992 SLC4A9Q96Q91 983 aa9.91□□□□□ -0.82
PTPN18-206ENST00000460992 THUMPD2Q9BTF0 503 aaKnown RBP9.91□□□□□ -0.82
PTPN18-206ENST00000460992 PDGFDQ9GZP0 370 aaPredicted RBP9.91□□□□□ -0.82
PTPN18-206ENST00000460992 STK32BQ9NY57 414 aa9.91□□□□□ -0.82
PTPN18-206ENST00000460992 DAXXQ9UER7 740 aaPredicted RBP9.91□□□□□ -0.82
PTPN18-206ENST00000460992 RRP7AQ9Y3A4 280 aaKnown RBP9.91□□□□□ -0.82
PTPN18-206ENST00000460992 PNPLA7Q6ZV29 1317 aa9.9□□□□□ -0.82
PTPN18-206ENST00000460992 ATXN8OSP0DMR3 200 aa9.9□□□□□ -0.82
PTPN18-206ENST00000460992 TEFQ10587 303 aa9.9□□□□□ -0.82
PTPN18-206ENST00000460992 SLC15A2Q16348 729 aa9.9□□□□□ -0.82
PTPN18-206ENST00000460992 NBPF14Q5TI25 921 aa9.9□□□□□ -0.82
PTPN18-206ENST00000460992 AMIGO3Q86WK7 504 aa9.9□□□□□ -0.82
PTPN18-206ENST00000460992 AKT1S1Q96B36 256 aa9.9□□□□□ -0.82
PTPN18-206ENST00000460992 CRBNQ96SW2 442 aa9.9□□□□□ -0.82
PTPN18-206ENST00000460992 PTCD1O75127 700 aaKnown RBP9.89□□□□□ -0.83
PTPN18-206ENST00000460992 ATP6V1AP38606 617 aa9.89□□□□□ -0.83
PTPN18-206ENST00000460992 FAM161AQ3B820 660 aa9.89□□□□□ -0.83
PTPN18-206ENST00000460992 RTF1Q92541 710 aaKnown RBP9.89□□□□□ -0.83
PTPN18-206ENST00000460992 CDCA7LQ96GN5 454 aa9.89□□□□□ -0.83
PTPN18-206ENST00000460992 RBM42Q9BTD8 480 aaKnown RBP9.89□□□□□ -0.83
PTPN18-206ENST00000460992 SENP3-EIF4A1A0A087X0R7 540 aa9.88□□□□□ -0.83
PTPN18-206ENST00000460992 CT47B1P0C2W7 299 aaPredicted RBP9.88□□□□□ -0.83
PTPN18-206ENST00000460992 RUNDC1Q96C34 613 aa9.88□□□□□ -0.83
PTPN18-206ENST00000460992 AK7Q96M32 723 aa9.88□□□□□ -0.83
PTPN18-206ENST00000460992 HEG1Q9ULI3 1381 aa9.88□□□□□ -0.83
PTPN18-206ENST00000460992 CNTNAP4Q9C0A0 1308 aa9.87□□□□□ -0.83
PTPN18-206ENST00000460992 PHF14O94880 888 aa9.87□□□□□ -0.83
PTPN18-206ENST00000460992 TMPOP42166 694 aaKnown RBP9.87□□□□□ -0.83
PTPN18-206ENST00000460992 CCDC27Q2M243 656 aa9.87□□□□□ -0.83
PTPN18-206ENST00000460992 TTC5Q8N0Z6 440 aa9.87□□□□□ -0.83
PTPN18-206ENST00000460992 PNNQ9H307 717 aaKnown RBP9.87□□□□□ -0.83
PTPN18-206ENST00000460992 BTBD11A6QL63 1104 aa9.86□□□□□ -0.83
PTPN18-206ENST00000460992 GNPATO15228 680 aa9.86□□□□□ -0.83
PTPN18-206ENST00000460992 KCNQ3O43525 872 aa9.86□□□□□ -0.83
PTPN18-206ENST00000460992 ZBTB7AO95365 584 aa9.86□□□□□ -0.83
PTPN18-206ENST00000460992 RIPK4P57078 832 aa9.86□□□□□ -0.83
PTPN18-206ENST00000460992 NEUROD2Q15784 382 aa9.86□□□□□ -0.83
PTPN18-206ENST00000460992 SMIM5Q71RC9 77 aa9.86□□□□□ -0.83
PTPN18-206ENST00000460992 WDR63Q8IWG1 891 aa9.86□□□□□ -0.83
PTPN18-206ENST00000460992 DNAJC10Q8IXB1 793 aa9.86□□□□□ -0.83
PTPN18-206ENST00000460992 TFCP2L1Q9NZI6 479 aa9.86□□□□□ -0.83
PTPN18-206ENST00000460992 APAF1O14727 1248 aa9.85□□□□□ -0.83
PTPN18-206ENST00000460992 HTATSF1O43719 755 aaKnown RBP9.85□□□□□ -0.83
PTPN18-206ENST00000460992 LMOD3Q0VAK6 560 aa9.85□□□□□ -0.83
PTPN18-206ENST00000460992 ZNF790Q6PG37 636 aa9.85□□□□□ -0.83
PTPN18-206ENST00000460992 ZNF496Q96IT1 587 aaPredicted RBP9.85□□□□□ -0.83
PTPN18-206ENST00000460992 SALL2Q9Y467 1007 aaPredicted RBP9.85□□□□□ -0.83
PTPN18-206ENST00000460992 TRIM35Q9UPQ4 493 aa9.84□□□□□ -0.83
PTPN18-206ENST00000460992 ZBTB1Q9Y2K1 713 aa9.84□□□□□ -0.83
PTPN18-206ENST00000460992 COL15A1P39059 1388 aa9.84□□□□□ -0.83
PTPN18-206ENST00000460992 KIAA1551Q9HCM1 1747 aa9.83□□□□□ -0.84
PTPN18-206ENST00000460992 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.83□□□□□ -0.84
PTPN18-206ENST00000460992 PRAMEF22A3QJZ6 481 aa9.83□□□□□ -0.84
PTPN18-206ENST00000460992 CRKLP46109 303 aaKnown RBP9.83□□□□□ -0.84
PTPN18-206ENST00000460992 MSL1Q68DK7 614 aa9.83□□□□□ -0.84
PTPN18-206ENST00000460992 COL23A1Q86Y22 540 aaPredicted RBP9.83□□□□□ -0.84
PTPN18-206ENST00000460992 FMNL2Q96PY5 1086 aa9.83□□□□□ -0.84
PTPN18-206ENST00000460992 MIS18AQ9NYP9 233 aa9.83□□□□□ -0.84
PTPN18-206ENST00000460992 ANKRD36CQ5JPF3 1778 aa9.83□□□□□ -0.84
PTPN18-206ENST00000460992 SOS1Q07889 1333 aaPredicted RBP9.82□□□□□ -0.84
PTPN18-206ENST00000460992 AFDNP55196 1824 aaKnown RBP9.82□□□□□ -0.84
PTPN18-206ENST00000460992 KIF13BQ9NQT8 1826 aa9.82□□□□□ -0.84
PTPN18-206ENST00000460992 SSFA2P28290 1259 aa9.82□□□□□ -0.84
PTPN18-206ENST00000460992 MTFR1LQ9H019 292 aa9.82□□□□□ -0.84
PTPN18-206ENST00000460992 TSPYL4Q9UJ04 414 aa9.82□□□□□ -0.84
PTPN18-206ENST00000460992 PLIN1O60240 522 aa9.81□□□□□ -0.84
PTPN18-206ENST00000460992 CYP19A1P11511 503 aaPredicted RBP9.81□□□□□ -0.84
PTPN18-206ENST00000460992 NBR1Q14596 966 aa9.81□□□□□ -0.84
PTPN18-206ENST00000460992 VSIG10Q8N0Z9 540 aa9.81□□□□□ -0.84
PTPN18-206ENST00000460992 MYH16Q9H6N6 1097 aa9.81□□□□□ -0.84
PTPN18-206ENST00000460992 CCDC87Q9NVE4 849 aa9.81□□□□□ -0.84
PTPN18-206ENST00000460992 ATF5Q9Y2D1 282 aaPredicted RBP9.81□□□□□ -0.84
PTPN18-206ENST00000460992 COL11A2P13942 1736 aaPredicted RBP9.81□□□□□ -0.84
PTPN18-206ENST00000460992 NRXN2Q9P2S2 1712 aa9.81□□□□□ -0.84
PTPN18-206ENST00000460992 ARFGEF2Q9Y6D5 1785 aa9.8□□□□□ -0.84
PTPN18-206ENST00000460992 PTGER2P43116 358 aa9.8□□□□□ -0.84
PTPN18-206ENST00000460992 PIP4K2AP48426 406 aaPredicted RBP9.8□□□□□ -0.84
PTPN18-206ENST00000460992 BECN1Q14457 450 aa9.8□□□□□ -0.84
PTPN18-206ENST00000460992 TAF7Q15545 349 aaPredicted RBP9.8□□□□□ -0.84
PTPN18-206ENST00000460992 INTS5Q6P9B9 1019 aaKnown RBP9.8□□□□□ -0.84
PTPN18-206ENST00000460992 NPM2Q86SE8 214 aaKnown RBP9.8□□□□□ -0.84
PTPN18-206ENST00000460992 SPON1Q9HCB6 807 aa9.8□□□□□ -0.84
PTPN18-206ENST00000460992 RTCBQ9Y3I0 505 aaKnown RBP9.8□□□□□ -0.84
PTPN18-206ENST00000460992 USP42Q9H9J4 1324 aaKnown RBP9.8□□□□□ -0.84
PTPN18-206ENST00000460992 DLEC1Q9Y238 1755 aa9.79□□□□□ -0.84
PTPN18-206ENST00000460992 KRT24Q2M2I5 525 aa9.79□□□□□ -0.84
PTPN18-206ENST00000460992 WWC1Q8IX03 1113 aa9.79□□□□□ -0.84
PTPN18-206ENST00000460992 CLUAP1Q96AJ1 413 aa9.79□□□□□ -0.84
PTPN18-206ENST00000460992 SGIP1Q9BQI5 828 aa9.79□□□□□ -0.84
PTPN18-206ENST00000460992 UPF2Q9HAU5 1272 aaKnown RBP9.79□□□□□ -0.84
PTPN18-206ENST00000460992 ZNF330Q9Y3S2 320 aaPredicted RBP9.79□□□□□ -0.84
PTPN18-206ENST00000460992 LAS1LQ9Y4W2 734 aaKnown RBP9.79□□□□□ -0.84
PTPN18-206ENST00000460992 UTRNP46939 3433 aa9.79□□□□□ -0.84
PTPN18-206ENST00000460992 BRCA1P38398 1863 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms