RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 SHANK3Q9BYB0 1731 aa14.18□□□□□ -0.14
SMNDC1-203ENST00000460483 NHSQ6T4R5 1651 aa14.18□□□□□ -0.14
SMNDC1-203ENST00000460483 GIGYF1O75420 1035 aaPredicted RBP14.18□□□□□ -0.14
SMNDC1-203ENST00000460483 TXNRD1Q16881 649 aa14.18□□□□□ -0.14
SMNDC1-203ENST00000460483 NBPF14Q5TI25 921 aa14.18□□□□□ -0.14
SMNDC1-203ENST00000460483 CCDC30Q5VVM6 783 aa14.18□□□□□ -0.14
SMNDC1-203ENST00000460483 STK31Q9BXU1 1019 aa14.18□□□□□ -0.14
SMNDC1-203ENST00000460483 ERBB4Q15303 1308 aa14.17□□□□□ -0.14
SMNDC1-203ENST00000460483 TWISTNBQ3B726 338 aaPredicted RBP14.17□□□□□ -0.14
SMNDC1-203ENST00000460483 UPF1Q92900 1129 aaKnown RBP eCLIP14.17□□□□□ -0.14
SMNDC1-203ENST00000460483 TSR2Q969E8 191 aaKnown RBP14.17□□□□□ -0.14
SMNDC1-203ENST00000460483 DUSP27Q5VZP5 1158 aa14.16□□□□□ -0.14
SMNDC1-203ENST00000460483 TRMT2AQ8IZ69 625 aaKnown RBP14.16□□□□□ -0.14
SMNDC1-203ENST00000460483 SCN11AQ9UI33 1791 aa14.15□□□□□ -0.14
SMNDC1-203ENST00000460483 EN1Q05925 392 aaPredicted RBP14.15□□□□□ -0.14
SMNDC1-203ENST00000460483 RC3H1Q5TC82 1133 aaKnown RBP14.15□□□□□ -0.14
SMNDC1-203ENST00000460483 HDGFL1Q5TGJ6 251 aa14.15□□□□□ -0.14
SMNDC1-203ENST00000460483 FLAD1Q8NFF5 587 aa14.15□□□□□ -0.14
SMNDC1-203ENST00000460483 DBF4Q9UBU7 674 aaPredicted RBP14.15□□□□□ -0.14
SMNDC1-203ENST00000460483 BRWD3Q6RI45 1802 aa14.15□□□□□ -0.14
SMNDC1-203ENST00000460483 DOT1LQ8TEK3 1739 aa14.15□□□□□ -0.14
SMNDC1-203ENST00000460483 EXOSC9Q06265 439 aaKnown RBP14.14□□□□□ -0.15
SMNDC1-203ENST00000460483 ILDR2Q71H61 639 aa14.14□□□□□ -0.15
SMNDC1-203ENST00000460483 CDCA7LQ96GN5 454 aa14.14□□□□□ -0.15
SMNDC1-203ENST00000460483 AK7Q96M32 723 aa14.14□□□□□ -0.15
SMNDC1-203ENST00000460483 CAMKK2Q96RR4 588 aa14.14□□□□□ -0.15
SMNDC1-203ENST00000460483 A0A087WZG4 1122 aa14.13□□□□□ -0.15
SMNDC1-203ENST00000460483 KCNQ3O43525 872 aa14.13□□□□□ -0.15
SMNDC1-203ENST00000460483 STK32BQ9NY57 414 aa14.13□□□□□ -0.15
SMNDC1-203ENST00000460483 CNTNAP4Q9C0A0 1308 aa14.13□□□□□ -0.15
SMNDC1-203ENST00000460483 ELL2O00472 640 aaPredicted RBP14.12□□□□□ -0.15
SMNDC1-203ENST00000460483 EIF2S2P20042 333 aaKnown RBP14.12□□□□□ -0.15
SMNDC1-203ENST00000460483 ALDH1L2Q3SY69 923 aa14.12□□□□□ -0.15
SMNDC1-203ENST00000460483 PTF1AQ7RTS3 328 aa14.12□□□□□ -0.15
SMNDC1-203ENST00000460483 DNAJC10Q8IXB1 793 aa14.12□□□□□ -0.15
SMNDC1-203ENST00000460483 CCDC87Q9NVE4 849 aa14.12□□□□□ -0.15
SMNDC1-203ENST00000460483 HYPKQ9NX55 129 aa14.12□□□□□ -0.15
SMNDC1-203ENST00000460483 RTCBQ9Y3I0 505 aaKnown RBP14.12□□□□□ -0.15
SMNDC1-203ENST00000460483 CENPBP07199 599 aaPredicted RBP14.11□□□□□ -0.15
SMNDC1-203ENST00000460483 CYP19A1P11511 503 aaPredicted RBP14.11□□□□□ -0.15
SMNDC1-203ENST00000460483 IL6STP40189 918 aaPredicted RBP14.11□□□□□ -0.15
SMNDC1-203ENST00000460483 EZH2Q15910 746 aaKnown RBP14.11□□□□□ -0.15
SMNDC1-203ENST00000460483 C8orf58Q8NAV2 365 aa14.11□□□□□ -0.15
SMNDC1-203ENST00000460483 TOGARAM1Q9Y4F4 1720 aa14.1□□□□□ -0.15
SMNDC1-203ENST00000460483 VAMP4O75379 141 aa14.1□□□□□ -0.15
SMNDC1-203ENST00000460483 DDX58O95786 925 aaKnown RBP14.1□□□□□ -0.15
SMNDC1-203ENST00000460483 DDX21Q9NR30 783 aaKnown RBP eCLIP14.1□□□□□ -0.15
SMNDC1-203ENST00000460483 TFCP2L1Q9NZI6 479 aa14.1□□□□□ -0.15
SMNDC1-203ENST00000460483 DLG5Q8TDM6 1919 aa14.09□□□□□ -0.15
SMNDC1-203ENST00000460483 IPO8O15397 1037 aaKnown RBP14.09□□□□□ -0.15
SMNDC1-203ENST00000460483 SSFA2P28290 1259 aa14.09□□□□□ -0.15
SMNDC1-203ENST00000460483 CRKLP46109 303 aaKnown RBP14.09□□□□□ -0.15
SMNDC1-203ENST00000460483 TRAPPC3LQ5T215 181 aa14.09□□□□□ -0.15
SMNDC1-203ENST00000460483 DEFB132Q7Z7B7 95 aa14.09□□□□□ -0.15
SMNDC1-203ENST00000460483 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.09□□□□□ -0.15
SMNDC1-203ENST00000460483 USP16Q9Y5T5 823 aa14.09□□□□□ -0.15
SMNDC1-203ENST00000460483 KCPQ6ZWJ8 1503 aa14.09□□□□□ -0.15
SMNDC1-203ENST00000460483 SOCS7O14512 581 aa14.08□□□□□ -0.16
SMNDC1-203ENST00000460483 GNPATO15228 680 aa14.08□□□□□ -0.16
SMNDC1-203ENST00000460483 RPS6KA4O75676 772 aa14.08□□□□□ -0.16
SMNDC1-203ENST00000460483 ITPK1Q13572 414 aa14.08□□□□□ -0.16
SMNDC1-203ENST00000460483 KIF6Q6ZMV9 814 aa14.08□□□□□ -0.16
SMNDC1-203ENST00000460483 PROM2Q8N271 834 aa14.08□□□□□ -0.16
SMNDC1-203ENST00000460483 CREBZFQ9NS37 354 aa14.08□□□□□ -0.16
SMNDC1-203ENST00000460483 RGL2O15211 777 aa14.07□□□□□ -0.16
SMNDC1-203ENST00000460483 MS4A1P11836 297 aa14.07□□□□□ -0.16
SMNDC1-203ENST00000460483 CANXP27824 592 aaKnown RBP14.07□□□□□ -0.16
SMNDC1-203ENST00000460483 RFC4P35249 363 aa14.07□□□□□ -0.16
SMNDC1-203ENST00000460483 TSPYL6Q8N831 410 aa14.07□□□□□ -0.16
SMNDC1-203ENST00000460483 LINC00116Q8NCU8 138 aa14.07□□□□□ -0.16
SMNDC1-203ENST00000460483 SLC4A9Q96Q91 983 aa14.07□□□□□ -0.16
SMNDC1-203ENST00000460483 LRRC4BQ9NT99 713 aa14.07□□□□□ -0.16
SMNDC1-203ENST00000460483 SMC4Q9NTJ3 1288 aa14.07□□□□□ -0.16
SMNDC1-203ENST00000460483 ZNF652Q9Y2D9 606 aa14.07□□□□□ -0.16
SMNDC1-203ENST00000460483 KIF16BQ96L93 1317 aa14.07□□□□□ -0.16
SMNDC1-203ENST00000460483 BTAF1O14981 1849 aa14.06□□□□□ -0.16
SMNDC1-203ENST00000460483 ZPR1O75312 459 aa14.06□□□□□ -0.16
SMNDC1-203ENST00000460483 SLC15A2Q16348 729 aa14.06□□□□□ -0.16
SMNDC1-203ENST00000460483 KRT24Q2M2I5 525 aa14.06□□□□□ -0.16
SMNDC1-203ENST00000460483 ARXQ96QS3 562 aa14.06□□□□□ -0.16
SMNDC1-203ENST00000460483 ZNF330Q9Y3S2 320 aaPredicted RBP14.06□□□□□ -0.16
SMNDC1-203ENST00000460483 ITGB4P16144 1822 aa14.06□□□□□ -0.16
SMNDC1-203ENST00000460483 PAPPAQ13219 1627 aa14.05□□□□□ -0.16
SMNDC1-203ENST00000460483 ZNF831Q5JPB2 1677 aa14.05□□□□□ -0.16
SMNDC1-203ENST00000460483 RGPD3A6NKT7 1758 aaPredicted RBP14.05□□□□□ -0.16
SMNDC1-203ENST00000460483 SIPA1L3O60292 1781 aaPredicted RBP14.05□□□□□ -0.16
SMNDC1-203ENST00000460483 RGPD4Q7Z3J3 1758 aa14.05□□□□□ -0.16
SMNDC1-203ENST00000460483 A1BGP04217 495 aa14.05□□□□□ -0.16
SMNDC1-203ENST00000460483 INTS5Q6P9B9 1019 aaKnown RBP14.05□□□□□ -0.16
SMNDC1-203ENST00000460483 CHPF2Q9P2E5 772 aa14.05□□□□□ -0.16
SMNDC1-203ENST00000460483 RCAN3Q9UKA8 241 aa14.05□□□□□ -0.16
SMNDC1-203ENST00000460483 SBF2Q86WG5 1849 aa14.05□□□□□ -0.16
SMNDC1-203ENST00000460483 MYL6BP14649 208 aa14.04□□□□□ -0.16
SMNDC1-203ENST00000460483 EIF5P55010 431 aaKnown RBP14.04□□□□□ -0.16
SMNDC1-203ENST00000460483 BRPF1P55201 1214 aaPredicted RBP14.04□□□□□ -0.16
SMNDC1-203ENST00000460483 HSP90AB3PQ58FF7 597 aa14.04□□□□□ -0.16
SMNDC1-203ENST00000460483 SLC16A10Q8TF71 515 aa14.04□□□□□ -0.16
SMNDC1-203ENST00000460483 NECTIN2Q92692 538 aa14.04□□□□□ -0.16
SMNDC1-203ENST00000460483 ZBTB1Q9Y2K1 713 aa14.04□□□□□ -0.16
SMNDC1-203ENST00000460483 PTPRCP08575 1304 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms