RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 LTN1O94822 1766 aa22.13■■□□□ 1.13
HPS3-202ENST00000460120 CEMIPQ8WUJ3 1361 aa22.13■■□□□ 1.13
HPS3-202ENST00000460120 BEND3Q5T5X7 828 aa22.13■■□□□ 1.13
HPS3-202ENST00000460120 SSH3Q8TE77 659 aa22.13■■□□□ 1.13
HPS3-202ENST00000460120 DDX17Q92841 729 aaKnown RBP22.13■■□□□ 1.13
HPS3-202ENST00000460120 LARP6Q9BRS8 491 aaKnown RBP22.13■■□□□ 1.13
HPS3-202ENST00000460120 CWF19L2Q2TBE0 894 aaKnown RBP22.13■■□□□ 1.13
HPS3-202ENST00000460120 SKOR2Q2VWA4 1001 aaPredicted RBP22.13■■□□□ 1.13
HPS3-202ENST00000460120 AKAP4Q5JQC9 854 aa22.13■■□□□ 1.13
HPS3-202ENST00000460120 TMX3Q96JJ7 454 aa22.13■■□□□ 1.13
HPS3-202ENST00000460120 PRPF40AO75400 957 aaKnown RBP22.12■■□□□ 1.13
HPS3-202ENST00000460120 NUCB2P80303 420 aa22.12■■□□□ 1.13
HPS3-202ENST00000460120 TPRNQ4KMQ1 711 aa22.12■■□□□ 1.13
HPS3-202ENST00000460120 CAVIN1Q6NZI2 390 aaKnown RBP22.12■■□□□ 1.13
HPS3-202ENST00000460120 MCCP23508 829 aa22.12■■□□□ 1.13
HPS3-202ENST00000460120 MAP3K2Q9Y2U5 619 aa22.12■■□□□ 1.13
HPS3-202ENST00000460120 DTNBO60941 627 aa22.11■■□□□ 1.13
HPS3-202ENST00000460120 PA2G4Q9UQ80 394 aaKnown RBP22.11■■□□□ 1.13
HPS3-202ENST00000460120 RNMTO43148 476 aaKnown RBP22.11■■□□□ 1.13
HPS3-202ENST00000460120 C9orf78Q9NZ63 289 aaPredicted RBP22.11■■□□□ 1.13
HPS3-202ENST00000460120 ZDHHC9Q9Y397 364 aa22.11■■□□□ 1.13
HPS3-202ENST00000460120 PXDNQ92626 1479 aa22.11■■□□□ 1.13
HPS3-202ENST00000460120 BABAM1Q9NWV8 329 aa22.1■■□□□ 1.13
HPS3-202ENST00000460120 SLC39A6Q13433 755 aa22.09■■□□□ 1.13
HPS3-202ENST00000460120 RBM27Q9P2N5 1060 aaKnown RBP22.09■■□□□ 1.13
HPS3-202ENST00000460120 STAP2Q9UGK3 403 aa22.09■■□□□ 1.13
HPS3-202ENST00000460120 NFAT5O94916 1531 aa22.09■■□□□ 1.13
HPS3-202ENST00000460120 ARHGEF25Q86VW2 580 aa22.08■■□□□ 1.13
HPS3-202ENST00000460120 ADCY9O60503 1353 aa22.08■■□□□ 1.13
HPS3-202ENST00000460120 RGPD2P0DJD1 1756 aa22.08■■□□□ 1.13
HPS3-202ENST00000460120 CWC27Q6UX04 472 aaKnown RBP22.08■■□□□ 1.13
HPS3-202ENST00000460120 PIP4K2AP48426 406 aaPredicted RBP22.07■■□□□ 1.12
HPS3-202ENST00000460120 POLA2Q14181 598 aa22.07■■□□□ 1.12
HPS3-202ENST00000460120 KRT28Q7Z3Y7 464 aa22.07■■□□□ 1.12
HPS3-202ENST00000460120 PROSER2Q86WR7 435 aaPredicted RBP22.07■■□□□ 1.12
HPS3-202ENST00000460120 SPG7Q9UQ90 795 aa22.07■■□□□ 1.12
HPS3-202ENST00000460120 ADGRL3Q9HAR2 1447 aa22.07■■□□□ 1.12
HPS3-202ENST00000460120 CYP2E1P05181 493 aaPredicted RBP22.07■■□□□ 1.12
HPS3-202ENST00000460120 MYL6BP14649 208 aa22.06■■□□□ 1.12
HPS3-202ENST00000460120 PI4K2BQ8TCG2 481 aa22.06■■□□□ 1.12
HPS3-202ENST00000460120 KIF1BPQ96EK5 621 aa22.06■■□□□ 1.12
HPS3-202ENST00000460120 CWC22Q9HCG8 908 aaKnown RBP22.06■■□□□ 1.12
HPS3-202ENST00000460120 DBF4Q9UBU7 674 aaPredicted RBP22.06■■□□□ 1.12
HPS3-202ENST00000460120 LMBRD1Q9NUN5 540 aa22.06■■□□□ 1.12
HPS3-202ENST00000460120 KLHL40Q2TBA0 621 aa22.05■■□□□ 1.12
HPS3-202ENST00000460120 NLRP2Q9NX02 1062 aa22.05■■□□□ 1.12
HPS3-202ENST00000460120 RAB11FIP3O75154 756 aa22.05■■□□□ 1.12
HPS3-202ENST00000460120 GIGYF1O75420 1035 aaPredicted RBP22.05■■□□□ 1.12
HPS3-202ENST00000460120 PTMSP20962 102 aa22.05■■□□□ 1.12
HPS3-202ENST00000460120 JARID2Q92833 1246 aaPredicted RBP22.04■■□□□ 1.12
HPS3-202ENST00000460120 CPA1P15085 419 aa22.04■■□□□ 1.12
HPS3-202ENST00000460120 AMOTQ4VCS5 1084 aa22.04■■□□□ 1.12
HPS3-202ENST00000460120 DDX54Q8TDD1 881 aaKnown RBP22.04■■□□□ 1.12
HPS3-202ENST00000460120 CABLES1Q8TDN4 633 aa22.04■■□□□ 1.12
HPS3-202ENST00000460120 SIL1Q9H173 461 aa22.03■■□□□ 1.12
HPS3-202ENST00000460120 PXDNLA1KZ92 1463 aa22.03■■□□□ 1.12
HPS3-202ENST00000460120 NSFL1CQ9UNZ2 370 aaKnown RBP22.02■■□□□ 1.12
HPS3-202ENST00000460120 GPT2Q8TD30 523 aa22.01■■□□□ 1.11
HPS3-202ENST00000460120 CLEC17AQ6ZS10 378 aa22.01■■□□□ 1.11
HPS3-202ENST00000460120 CNTROBQ8N137 903 aa22.01■■□□□ 1.11
HPS3-202ENST00000460120 KLHDC4Q8TBB5 520 aa22.01■■□□□ 1.11
HPS3-202ENST00000460120 GDPD2Q9HCC8 539 aa22.01■■□□□ 1.11
HPS3-202ENST00000460120 CHD2O14647 1828 aaKnown RBP22.01■■□□□ 1.11
HPS3-202ENST00000460120 ZSCAN23Q3MJ62 389 aa22■■□□□ 1.11
HPS3-202ENST00000460120 TRIM44Q96DX7 344 aaPredicted RBP22■■□□□ 1.11
HPS3-202ENST00000460120 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22■■□□□ 1.11
HPS3-202ENST00000460120 HOXB7P09629 217 aa22■■□□□ 1.11
HPS3-202ENST00000460120 NASPP49321 788 aaPredicted RBP22■■□□□ 1.11
HPS3-202ENST00000460120 CSB-PGBD3P0DP91 1061 aa22■■□□□ 1.11
HPS3-202ENST00000460120 KSR2Q6VAB6 950 aa22■■□□□ 1.11
HPS3-202ENST00000460120 NPHP4O75161 1426 aaPredicted RBP21.99■■□□□ 1.11
HPS3-202ENST00000460120 CHRNA2Q15822 529 aa21.99■■□□□ 1.11
HPS3-202ENST00000460120 CLASRPQ8N2M8 674 aaKnown RBP21.99■■□□□ 1.11
HPS3-202ENST00000460120 AACSQ86V21 672 aa21.99■■□□□ 1.11
HPS3-202ENST00000460120 RASEFQ8IZ41 740 aa21.99■■□□□ 1.11
HPS3-202ENST00000460120 SUCLG2Q96I99 432 aa21.99■■□□□ 1.11
HPS3-202ENST00000460120 IFIT2P09913 472 aaKnown RBP21.98■■□□□ 1.11
HPS3-202ENST00000460120 KIAA1211Q6ZU35 1233 aa21.98■■□□□ 1.11
HPS3-202ENST00000460120 CCDC8Q9H0W5 538 aaPredicted RBP21.98■■□□□ 1.11
HPS3-202ENST00000460120 DIAPH3Q9NSV4 1193 aa21.98■■□□□ 1.11
HPS3-202ENST00000460120 SGSM2O43147 1006 aa21.98■■□□□ 1.11
HPS3-202ENST00000460120 RIC3Q7Z5B4 369 aa21.98■■□□□ 1.11
HPS3-202ENST00000460120 NFATC2IPQ8NCF5 419 aa21.98■■□□□ 1.11
HPS3-202ENST00000460120 HSPA4P34932 840 aa21.97■■□□□ 1.11
HPS3-202ENST00000460120 RAPGEF4Q8WZA2 1011 aa21.97■■□□□ 1.11
HPS3-202ENST00000460120 BICC1Q9H694 974 aaKnown RBP21.97■■□□□ 1.11
HPS3-202ENST00000460120 ERBB4Q15303 1308 aa21.97■■□□□ 1.11
HPS3-202ENST00000460120 SNX14Q9Y5W7 946 aa21.96■■□□□ 1.11
HPS3-202ENST00000460120 ANAPC15P60006 121 aa21.96■■□□□ 1.11
HPS3-202ENST00000460120 AOX1Q06278 1338 aa21.96■■□□□ 1.11
HPS3-202ENST00000460120 MCM2P49736 904 aa21.95■■□□□ 1.1
HPS3-202ENST00000460120 HSP90AB4PQ58FF6 505 aa21.95■■□□□ 1.1
HPS3-202ENST00000460120 MED1Q15648 1581 aaPredicted RBP21.95■■□□□ 1.1
HPS3-202ENST00000460120 SYCE3A1L190 88 aa21.94■■□□□ 1.1
HPS3-202ENST00000460120 PRIM1P49642 420 aaKnown RBP21.94■■□□□ 1.1
HPS3-202ENST00000460120 LSG1Q9H089 658 aaKnown RBP21.94■■□□□ 1.1
HPS3-202ENST00000460120 TLR7Q9NYK1 1049 aaKnown RBP21.94■■□□□ 1.1
HPS3-202ENST00000460120 ISY1Q9ULR0 285 aaKnown RBP21.94■■□□□ 1.1
HPS3-202ENST00000460120 ERBB3P21860 1342 aa21.94■■□□□ 1.1
HPS3-202ENST00000460120 RAD50Q92878 1312 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms