RNA–Protein interactions for RNA: ENST00000460119.1

PDE6B-203, Transcript of phosphodiesterase 6B, humanhuman

TSL 4

Gene PDE6B, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-203ENST00000460119 NARFQ9UHQ1 456 aa29.41■■■□□ 2.3
PDE6B-203ENST00000460119 APLP1P51693 650 aa29.39■■■□□ 2.3
PDE6B-203ENST00000460119 TJP1Q07157 1748 aa29.39■■■□□ 2.3
PDE6B-203ENST00000460119 DNAJC5GQ8N7S2 189 aa29.38■■■□□ 2.29
PDE6B-203ENST00000460119 RRAGCQ9HB90 399 aa29.37■■■□□ 2.29
PDE6B-203ENST00000460119 SERPINB2P05120 415 aa29.36■■■□□ 2.29
PDE6B-203ENST00000460119 HTRA3P83110 453 aa29.35■■■□□ 2.29
PDE6B-203ENST00000460119 RASSF7Q02833 373 aa29.35■■■□□ 2.29
PDE6B-203ENST00000460119 BICDL1Q6ZP65 573 aa29.35■■■□□ 2.29
PDE6B-203ENST00000460119 KCPQ6ZWJ8 1503 aa29.35■■■□□ 2.29
PDE6B-203ENST00000460119 U2SURPO15042 1029 aaKnown RBP29.34■■■□□ 2.29
PDE6B-203ENST00000460119 IL17REQ8NFR9 667 aa29.34■■■□□ 2.29
PDE6B-203ENST00000460119 COL15A1P39059 1388 aa29.34■■■□□ 2.29
PDE6B-203ENST00000460119 C16orf71Q8IYS4 520 aaPredicted RBP29.33■■■□□ 2.29
PDE6B-203ENST00000460119 VSIG10Q8N0Z9 540 aa29.33■■■□□ 2.29
PDE6B-203ENST00000460119 PRELPP51888 382 aa29.32■■■□□ 2.28
PDE6B-203ENST00000460119 RBM46Q8TBY0 533 aaKnown RBP29.32■■■□□ 2.28
PDE6B-203ENST00000460119 SCN11AQ9UI33 1791 aa29.31■■■□□ 2.28
PDE6B-203ENST00000460119 ZNF496Q96IT1 587 aaPredicted RBP29.31■■■□□ 2.28
PDE6B-203ENST00000460119 ADAMTS7Q9UKP4 1686 aa29.31■■■□□ 2.28
PDE6B-203ENST00000460119 C2CD5Q86YS7 1000 aa29.3■■■□□ 2.28
PDE6B-203ENST00000460119 TTC5Q8N0Z6 440 aa29.3■■■□□ 2.28
PDE6B-203ENST00000460119 MRC1P22897 1456 aa29.29■■■□□ 2.28
PDE6B-203ENST00000460119 KDM2BQ8NHM5 1336 aa29.29■■■□□ 2.28
PDE6B-203ENST00000460119 EIF5P55010 431 aaKnown RBP29.29■■■□□ 2.28
PDE6B-203ENST00000460119 CCDC24Q8N4L8 307 aa29.29■■■□□ 2.28
PDE6B-203ENST00000460119 STARD3NLO95772 234 aa29.28■■■□□ 2.28
PDE6B-203ENST00000460119 TTLL6Q8N841 843 aa29.27■■■□□ 2.28
PDE6B-203ENST00000460119 TBC1D2BQ9UPU7 963 aa29.27■■■□□ 2.28
PDE6B-203ENST00000460119 ZNF330Q9Y3S2 320 aaPredicted RBP29.27■■■□□ 2.28
PDE6B-203ENST00000460119 CARMIL3Q8ND23 1372 aa29.26■■■□□ 2.28
PDE6B-203ENST00000460119 BRCA1P38398 1863 aaKnown RBP29.26■■■□□ 2.27
PDE6B-203ENST00000460119 TEFQ10587 303 aa29.26■■■□□ 2.27
PDE6B-203ENST00000460119 TBC1D9BQ66K14 1250 aa29.26■■■□□ 2.27
PDE6B-203ENST00000460119 GNAT3A8MTJ3 354 aa29.25■■■□□ 2.27
PDE6B-203ENST00000460119 KCNQ3O43525 872 aa29.25■■■□□ 2.27
PDE6B-203ENST00000460119 ZNF790Q6PG37 636 aa29.25■■■□□ 2.27
PDE6B-203ENST00000460119 H0YIN7 160 aa29.24■■■□□ 2.27
PDE6B-203ENST00000460119 A1BGP04217 495 aa29.24■■■□□ 2.27
PDE6B-203ENST00000460119 PHACTR3Q96KR7 559 aa29.24■■■□□ 2.27
PDE6B-203ENST00000460119 ZNF219Q9P2Y4 722 aaPredicted RBP29.24■■■□□ 2.27
PDE6B-203ENST00000460119 A0A087WZG4 1122 aa29.22■■■□□ 2.27
PDE6B-203ENST00000460119 FSTL1Q12841 308 aa29.22■■■□□ 2.27
PDE6B-203ENST00000460119 GAS2L2Q8NHY3 880 aa29.22■■■□□ 2.27
PDE6B-203ENST00000460119 LMNB1P20700 586 aa29.21■■■□□ 2.27
PDE6B-203ENST00000460119 HEG1Q9ULI3 1381 aa29.21■■■□□ 2.27
PDE6B-203ENST00000460119 NFKBIEO00221 500 aa29.2■■■□□ 2.26
PDE6B-203ENST00000460119 ZNF622Q969S3 477 aaKnown RBP eCLIP29.2■■■□□ 2.26
PDE6B-203ENST00000460119 ARFGEF1Q9Y6D6 1849 aa29.2■■■□□ 2.26
PDE6B-203ENST00000460119 COL3A1P02461 1466 aaPredicted RBP29.19■■■□□ 2.26
PDE6B-203ENST00000460119 TEX13AQ9BXU3 409 aaPredicted RBP29.18■■■□□ 2.26
PDE6B-203ENST00000460119 PRKAR2BP31323 418 aa29.17■■■□□ 2.26
PDE6B-203ENST00000460119 PIP4K2AP48426 406 aaPredicted RBP29.17■■■□□ 2.26
PDE6B-203ENST00000460119 PRR5LQ6MZQ0 368 aa29.17■■■□□ 2.26
PDE6B-203ENST00000460119 FMNL2Q96PY5 1086 aa29.17■■■□□ 2.26
PDE6B-203ENST00000460119 GLTPD2A6NH11 291 aa29.16■■■□□ 2.26
PDE6B-203ENST00000460119 KLRG1Q96E93 195 aa29.16■■■□□ 2.26
PDE6B-203ENST00000460119 USP16Q9Y5T5 823 aa29.16■■■□□ 2.26
PDE6B-203ENST00000460119 BTBD11A6QL63 1104 aa29.15■■■□□ 2.26
PDE6B-203ENST00000460119 C21orf2O43822 256 aa29.15■■■□□ 2.26
PDE6B-203ENST00000460119 IL6STP40189 918 aaPredicted RBP29.15■■■□□ 2.26
PDE6B-203ENST00000460119 BRIP1Q9BX63 1249 aa29.15■■■□□ 2.26
PDE6B-203ENST00000460119 NPC1L1Q9UHC9 1359 aa29.14■■■□□ 2.26
PDE6B-203ENST00000460119 PRAMEF22A3QJZ6 481 aa29.14■■■□□ 2.26
PDE6B-203ENST00000460119 SMC1BQ8NDV3 1235 aa29.14■■■□□ 2.26
PDE6B-203ENST00000460119 CAMTA2O94983 1202 aa29.13■■■□□ 2.25
PDE6B-203ENST00000460119 VEGFAP15692 232 aaPredicted RBP29.13■■■□□ 2.25
PDE6B-203ENST00000460119 RSPH6AQ9H0K4 717 aa29.13■■■□□ 2.25
PDE6B-203ENST00000460119 PDE6BP35913 854 aa29.12■■■□□ 2.25
PDE6B-203ENST00000460119 AFDNP55196 1824 aaKnown RBP29.12■■■□□ 2.25
PDE6B-203ENST00000460119 POTECB2RU33 542 aa29.11■■■□□ 2.25
PDE6B-203ENST00000460119 SETDB2Q96T68 719 aa29.11■■■□□ 2.25
PDE6B-203ENST00000460119 NRXN2Q9P2S2 1712 aa29.11■■■□□ 2.25
PDE6B-203ENST00000460119 ZC3H4Q9UPT8 1303 aaKnown RBP29.1■■■□□ 2.25
PDE6B-203ENST00000460119 CEMIPQ8WUJ3 1361 aa29.1■■■□□ 2.25
PDE6B-203ENST00000460119 MCM10Q7L590 875 aa29.09■■■□□ 2.25
PDE6B-203ENST00000460119 NPM2Q86SE8 214 aaKnown RBP29.09■■■□□ 2.25
PDE6B-203ENST00000460119 DZIP3Q86Y13 1208 aaKnown RBP29.09■■■□□ 2.25
PDE6B-203ENST00000460119 DCTN1Q14203 1278 aa29.08■■■□□ 2.25
PDE6B-203ENST00000460119 JMYQ8N9B5 988 aa29.08■■■□□ 2.25
PDE6B-203ENST00000460119 CFAP53Q96M91 514 aa29.08■■■□□ 2.25
PDE6B-203ENST00000460119 SBF1O95248 1867 aa29.07■■■□□ 2.24
PDE6B-203ENST00000460119 U2AF1L5P0DN76 240 aaPredicted RBP29.07■■■□□ 2.24
PDE6B-203ENST00000460119 U2AF1Q01081 240 aaKnown RBP eCLIP29.07■■■□□ 2.24
PDE6B-203ENST00000460119 CNBD1Q8NA66 436 aa29.07■■■□□ 2.24
PDE6B-203ENST00000460119 NPHP1O15259 732 aa29.06■■■□□ 2.24
PDE6B-203ENST00000460119 ERFEQ4G0M1 354 aa29.06■■■□□ 2.24
PDE6B-203ENST00000460119 UBR2Q8IWV8 1755 aa29.06■■■□□ 2.24
PDE6B-203ENST00000460119 PPP2R1AP30153 589 aa29.04■■■□□ 2.24
PDE6B-203ENST00000460119 COL13A1Q5TAT6 717 aaPredicted RBP29.04■■■□□ 2.24
PDE6B-203ENST00000460119 PDZRN3Q9UPQ7 1066 aa29.04■■■□□ 2.24
PDE6B-203ENST00000460119 SRGNP10124 158 aa29.03■■■□□ 2.24
PDE6B-203ENST00000460119 DPY19L2Q6NUT2 758 aa29.03■■■□□ 2.24
PDE6B-203ENST00000460119 NUDCQ9Y266 331 aa29.03■■■□□ 2.24
PDE6B-203ENST00000460119 WDR90Q96KV7 1748 aa29.01■■■□□ 2.23
PDE6B-203ENST00000460119 SNRPA1P09661 255 aaKnown RBP29.01■■■□□ 2.23
PDE6B-203ENST00000460119 ST5P78524 1137 aa29.01■■■□□ 2.23
PDE6B-203ENST00000460119 STYK1Q6J9G0 422 aa29.01■■■□□ 2.23
PDE6B-203ENST00000460119 PRPF40BQ6NWY9 871 aaKnown RBP29.01■■■□□ 2.23
PDE6B-203ENST00000460119 RTF1Q92541 710 aaKnown RBP29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms