RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 STARD3NLO95772 234 aa27.82■■■□□ 2.04
SRM-202ENST00000459997 USPL1Q5W0Q7 1092 aa27.82■■■□□ 2.04
SRM-202ENST00000459997 BTBD11A6QL63 1104 aa27.81■■■□□ 2.04
SRM-202ENST00000459997 CANXP27824 592 aaKnown RBP27.81■■■□□ 2.04
SRM-202ENST00000459997 MCM10Q7L590 875 aa27.81■■■□□ 2.04
SRM-202ENST00000459997 TGFB2P61812 414 aa27.8■■■□□ 2.04
SRM-202ENST00000459997 DDR1Q08345 913 aa27.8■■■□□ 2.04
SRM-202ENST00000459997 FMNL2Q96PY5 1086 aa27.8■■■□□ 2.04
SRM-202ENST00000459997 TEX13AQ9BXU3 409 aaPredicted RBP27.79■■■□□ 2.04
SRM-202ENST00000459997 NARFQ9UHQ1 456 aa27.79■■■□□ 2.04
SRM-202ENST00000459997 A0A0G2JLW4 131 aa27.78■■■□□ 2.04
SRM-202ENST00000459997 KCNQ3O43525 872 aa27.77■■■□□ 2.04
SRM-202ENST00000459997 NEFMP07197 916 aa27.77■■■□□ 2.04
SRM-202ENST00000459997 DDX10Q13206 875 aaKnown RBP27.77■■■□□ 2.04
SRM-202ENST00000459997 DCTN1Q14203 1278 aa27.77■■■□□ 2.04
SRM-202ENST00000459997 HTATSF1O43719 755 aaKnown RBP27.76■■■□□ 2.03
SRM-202ENST00000459997 TM4SF1P30408 202 aa27.76■■■□□ 2.03
SRM-202ENST00000459997 POLRMTO00411 1230 aaKnown RBP27.75■■■□□ 2.03
SRM-202ENST00000459997 DPEP1P16444 411 aa27.75■■■□□ 2.03
SRM-202ENST00000459997 RALBP1Q15311 655 aa27.75■■■□□ 2.03
SRM-202ENST00000459997 EIF5P55010 431 aaKnown RBP27.74■■■□□ 2.03
SRM-202ENST00000459997 DLG5Q8TDM6 1919 aa27.73■■■□□ 2.03
SRM-202ENST00000459997 A0A087WZG4 1122 aa27.72■■■□□ 2.03
SRM-202ENST00000459997 BCL2L12Q9HB09 334 aa27.72■■■□□ 2.03
SRM-202ENST00000459997 BCS1LQ9Y276 419 aa27.72■■■□□ 2.03
SRM-202ENST00000459997 ZNF330Q9Y3S2 320 aaPredicted RBP27.72■■■□□ 2.03
SRM-202ENST00000459997 BRCA1P38398 1863 aaKnown RBP27.71■■■□□ 2.03
SRM-202ENST00000459997 NFIXQ14938 502 aa27.71■■■□□ 2.03
SRM-202ENST00000459997 PLEKHF1Q96S99 279 aa27.71■■■□□ 2.03
SRM-202ENST00000459997 SCN7AQ01118 1682 aa27.7■■■□□ 2.02
SRM-202ENST00000459997 AFDNP55196 1824 aaKnown RBP27.69■■■□□ 2.02
SRM-202ENST00000459997 A1BGP04217 495 aa27.69■■■□□ 2.02
SRM-202ENST00000459997 PNNQ9H307 717 aaKnown RBP27.69■■■□□ 2.02
SRM-202ENST00000459997 MAPK8IP3Q9UPT6 1336 aa27.68■■■□□ 2.02
SRM-202ENST00000459997 IL6STP40189 918 aaPredicted RBP27.68■■■□□ 2.02
SRM-202ENST00000459997 NRXN2Q9P2S2 1712 aa27.67■■■□□ 2.02
SRM-202ENST00000459997 KCNA3P22001 575 aa27.67■■■□□ 2.02
SRM-202ENST00000459997 TAF7Q15545 349 aaPredicted RBP27.67■■■□□ 2.02
SRM-202ENST00000459997 NFE2L2Q16236 605 aa27.67■■■□□ 2.02
SRM-202ENST00000459997 USP16Q9Y5T5 823 aa27.67■■■□□ 2.02
SRM-202ENST00000459997 ATP10DQ9P241 1426 aa27.67■■■□□ 2.02
SRM-202ENST00000459997 PRAMEF22A3QJZ6 481 aa27.66■■■□□ 2.02
SRM-202ENST00000459997 SNRPA1P09661 255 aaKnown RBP27.66■■■□□ 2.02
SRM-202ENST00000459997 NPM2Q86SE8 214 aaKnown RBP27.66■■■□□ 2.02
SRM-202ENST00000459997 TBC1D2BQ9UPU7 963 aa27.66■■■□□ 2.02
SRM-202ENST00000459997 ADCY9O60503 1353 aa27.65■■■□□ 2.02
SRM-202ENST00000459997 BICDL1Q6ZP65 573 aa27.65■■■□□ 2.02
SRM-202ENST00000459997 PIM2Q9P1W9 311 aa27.65■■■□□ 2.02
SRM-202ENST00000459997 MYBBP1AQ9BQG0 1328 aaKnown RBP27.65■■■□□ 2.02
SRM-202ENST00000459997 SERPINB2P05120 415 aa27.64■■■□□ 2.02
SRM-202ENST00000459997 CHRNA5P30532 468 aa27.64■■■□□ 2.02
SRM-202ENST00000459997 ZEB1P37275 1124 aaPredicted RBP27.64■■■□□ 2.02
SRM-202ENST00000459997 MIS18AQ9NYP9 233 aa27.64■■■□□ 2.02
SRM-202ENST00000459997 ARFGEF1Q9Y6D6 1849 aa27.62■■■□□ 2.01
SRM-202ENST00000459997 PIP4K2AP48426 406 aaPredicted RBP27.62■■■□□ 2.01
SRM-202ENST00000459997 KDM3BQ7LBC6 1761 aa27.62■■■□□ 2.01
SRM-202ENST00000459997 BCORQ6W2J9 1755 aa27.61■■■□□ 2.01
SRM-202ENST00000459997 GIGYF1O75420 1035 aaPredicted RBP27.61■■■□□ 2.01
SRM-202ENST00000459997 TBC1D9BQ66K14 1250 aa27.61■■■□□ 2.01
SRM-202ENST00000459997 ARHGAP27Q6ZUM4 889 aa27.61■■■□□ 2.01
SRM-202ENST00000459997 THUMPD2Q9BTF0 503 aaKnown RBP27.61■■■□□ 2.01
SRM-202ENST00000459997 DALRD3Q5D0E6 543 aaKnown RBP27.6■■■□□ 2.01
SRM-202ENST00000459997 PNISRQ8TF01 805 aaKnown RBP27.6■■■□□ 2.01
SRM-202ENST00000459997 LAMB4A4D0S4 1761 aa27.59■■■□□ 2.01
SRM-202ENST00000459997 DZIP3Q86Y13 1208 aaKnown RBP27.59■■■□□ 2.01
SRM-202ENST00000459997 CAMTA2O94983 1202 aa27.58■■■□□ 2.01
SRM-202ENST00000459997 CARMIL3Q8ND23 1372 aa27.58■■■□□ 2.01
SRM-202ENST00000459997 C1QTNF8P60827 252 aa27.57■■■□□ 2
SRM-202ENST00000459997 ZNF526Q8TF50 670 aaPredicted RBP27.57■■■□□ 2
SRM-202ENST00000459997 DLEC1Q9Y238 1755 aa27.56■■■□□ 2
SRM-202ENST00000459997 GPBP1L1Q9HC44 474 aaPredicted RBP27.56■■■□□ 2
SRM-202ENST00000459997 NBPF26B4DH59 902 aa27.54■■■□□ 2
SRM-202ENST00000459997 RIPK4P57078 832 aa27.54■■■□□ 2
SRM-202ENST00000459997 NBPF10Q6P3W6 841 aaKnown RBP27.54■■■□□ 2
SRM-202ENST00000459997 NBPF15Q8N660 670 aa27.54■■■□□ 2
SRM-202ENST00000459997 SETDB2Q96T68 719 aa27.54■■■□□ 2
SRM-202ENST00000459997 C2CD5Q86YS7 1000 aa27.53■■■□□ 2
SRM-202ENST00000459997 ANKRD31Q8N7Z5 1873 aa27.53■■■□□ 2
SRM-202ENST00000459997 EIF4A1P60842 406 aaKnown RBP27.52■■■□□ 2
SRM-202ENST00000459997 WDR43Q15061 677 aaKnown RBP eCLIP27.51■■□□□ 1.99
SRM-202ENST00000459997 PRR5LQ6MZQ0 368 aa27.51■■□□□ 1.99
SRM-202ENST00000459997 CCDC146Q8IYE0 955 aa27.51■■□□□ 1.99
SRM-202ENST00000459997 H0YIN7 160 aa27.5■■□□□ 1.99
SRM-202ENST00000459997 TMPOP42166 694 aaKnown RBP27.5■■□□□ 1.99
SRM-202ENST00000459997 CCDC24Q8N4L8 307 aa27.5■■□□□ 1.99
SRM-202ENST00000459997 ZNF652Q9Y2D9 606 aa27.5■■□□□ 1.99
SRM-202ENST00000459997 NPHP1O15259 732 aa27.49■■□□□ 1.99
SRM-202ENST00000459997 CLEC4GQ6UXB4 293 aa27.49■■□□□ 1.99
SRM-202ENST00000459997 CNBD1Q8NA66 436 aa27.49■■□□□ 1.99
SRM-202ENST00000459997 PRKRIP1Q9H875 184 aaPredicted RBP27.49■■□□□ 1.99
SRM-202ENST00000459997 LMOD3Q0VAK6 560 aa27.48■■□□□ 1.99
SRM-202ENST00000459997 BRIP1Q9BX63 1249 aa27.48■■□□□ 1.99
SRM-202ENST00000459997 TSPYL4Q9UJ04 414 aa27.48■■□□□ 1.99
SRM-202ENST00000459997 PDE6BP35913 854 aa27.47■■□□□ 1.99
SRM-202ENST00000459997 TTLL6Q8N841 843 aa27.47■■□□□ 1.99
SRM-202ENST00000459997 RRP7AQ9Y3A4 280 aaKnown RBP27.47■■□□□ 1.99
SRM-202ENST00000459997 COL11A2P13942 1736 aaPredicted RBP27.47■■□□□ 1.99
SRM-202ENST00000459997 C9orf131Q5VYM1 1079 aa27.46■■□□□ 1.99
SRM-202ENST00000459997 ST5P78524 1137 aa27.45■■□□□ 1.98
SRM-202ENST00000459997 NEUROD2Q15784 382 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms