RNA–Protein interactions for RNA: ENST00000459963.5

NCSTN-209, Transcript of nicastrin, human

TSL 5

Gene NCSTN, Length 1,246 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCSTN-209	ENST00000459963	LOC102724428	A0A0B4J2F2	783 aa		11.81	□□□□□ -0.52
NCSTN-209	ENST00000459963	LOC105371045	A0A1W2PR82	267 aa		11.81	□□□□□ -0.52
NCSTN-209	ENST00000459963	NFKBIE	O00221	500 aa		11.81	□□□□□ -0.52
NCSTN-209	ENST00000459963	MAP2K2	P36507	400 aa		11.81	□□□□□ -0.52
NCSTN-209	ENST00000459963	SIK1	P57059	783 aa		11.81	□□□□□ -0.52
NCSTN-209	ENST00000459963	ERFE	Q4G0M1	354 aa		11.81	□□□□□ -0.52
NCSTN-209	ENST00000459963	CYP4F22	Q6NT55	531 aa		11.81	□□□□□ -0.52
NCSTN-209	ENST00000459963	MS4A3	Q96HJ5	214 aa		11.81	□□□□□ -0.52
NCSTN-209	ENST00000459963	TAF1D	Q9H5J8	278 aa	Predicted RBP	11.81	□□□□□ -0.52
NCSTN-209	ENST00000459963	LTN1	O94822	1766 aa		11.81	□□□□□ -0.52
NCSTN-209	ENST00000459963	MEGF6	O75095	1541 aa		11.81	□□□□□ -0.52
NCSTN-209	ENST00000459963	CCDC88A	Q3V6T2	1871 aa		11.8	□□□□□ -0.52
NCSTN-209	ENST00000459963	NBPF1	Q3BBV0	1214 aa		11.8	□□□□□ -0.52
NCSTN-209	ENST00000459963	MPHOSPH9	Q99550	1183 aa		11.8	□□□□□ -0.52
NCSTN-209	ENST00000459963	ADAMTS7	Q9UKP4	1686 aa		11.8	□□□□□ -0.52
NCSTN-209	ENST00000459963	FAM208A	Q9UK61	1670 aa	Known RBP	11.79	□□□□□ -0.52
NCSTN-209	ENST00000459963	NUBP1	P53384	320 aa		11.79	□□□□□ -0.52
NCSTN-209	ENST00000459963	ITPK1	Q13572	414 aa		11.79	□□□□□ -0.52
NCSTN-209	ENST00000459963	EAPP	Q56P03	285 aa	Predicted RBP	11.79	□□□□□ -0.52
NCSTN-209	ENST00000459963	CNTROB	Q8N137	903 aa		11.79	□□□□□ -0.52
NCSTN-209	ENST00000459963	KDM2A	Q9Y2K7	1162 aa		11.79	□□□□□ -0.52
NCSTN-209	ENST00000459963	RTCB	Q9Y3I0	505 aa	Known RBP	11.79	□□□□□ -0.52
NCSTN-209	ENST00000459963	MAP2	P11137	1827 aa	Known RBP	11.79	□□□□□ -0.52
NCSTN-209	ENST00000459963	AOC2	O75106	756 aa		11.78	□□□□□ -0.52
NCSTN-209	ENST00000459963	ARHGEF1	Q92888	912 aa	Known RBP	11.78	□□□□□ -0.52
NCSTN-209	ENST00000459963	LTV1	Q96GA3	475 aa	Predicted RBP	11.78	□□□□□ -0.52
NCSTN-209	ENST00000459963	RFC4	P35249	363 aa		11.77	□□□□□ -0.53
NCSTN-209	ENST00000459963	MAP1S	Q66K74	1059 aa	Predicted RBP	11.77	□□□□□ -0.53
NCSTN-209	ENST00000459963	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.77	□□□□□ -0.53
NCSTN-209	ENST00000459963	SCN4A	P35499	1836 aa		11.76	□□□□□ -0.53
NCSTN-209	ENST00000459963	ATP6V1A	P38606	617 aa		11.76	□□□□□ -0.53
NCSTN-209	ENST00000459963	BRPF1	P55201	1214 aa	Predicted RBP	11.76	□□□□□ -0.53
NCSTN-209	ENST00000459963	PIGB	Q92521	554 aa		11.76	□□□□□ -0.53
NCSTN-209	ENST00000459963	DDX21	Q9NR30	783 aa	Known RBP eCLIP	11.76	□□□□□ -0.53
NCSTN-209	ENST00000459963	USP31	Q70CQ4	1352 aa		11.76	□□□□□ -0.53
NCSTN-209	ENST00000459963	ADAMTSL1	Q8N6G6	1762 aa		11.75	□□□□□ -0.53
NCSTN-209	ENST00000459963	DDR1	Q08345	913 aa		11.75	□□□□□ -0.53
NCSTN-209	ENST00000459963	TTLL6	Q8N841	843 aa		11.75	□□□□□ -0.53
NCSTN-209	ENST00000459963	DCAF11	Q8TEB1	546 aa		11.75	□□□□□ -0.53
NCSTN-209	ENST00000459963	IP6K1	Q92551	441 aa		11.75	□□□□□ -0.53
NCSTN-209	ENST00000459963	CGNL1	Q0VF96	1302 aa		11.75	□□□□□ -0.53
NCSTN-209	ENST00000459963	DICER1	Q9UPY3	1922 aa	Known RBP	11.74	□□□□□ -0.53
NCSTN-209	ENST00000459963	KIF12	Q96FN5	646 aa		11.74	□□□□□ -0.53
NCSTN-209	ENST00000459963	PCDH11X	Q9BZA7	1347 aa		11.74	□□□□□ -0.53
NCSTN-209	ENST00000459963	PCDH11Y	Q9BZA8	1340 aa		11.74	□□□□□ -0.53
NCSTN-209	ENST00000459963	DCAF8	Q5TAQ9	597 aa		11.73	□□□□□ -0.53
NCSTN-209	ENST00000459963	ITGB4	P16144	1822 aa		11.72	□□□□□ -0.53
NCSTN-209	ENST00000459963	PNMA8A	Q86V59	439 aa	Predicted RBP	11.72	□□□□□ -0.53
NCSTN-209	ENST00000459963	STAC3	Q96MF2	364 aa		11.72	□□□□□ -0.53
NCSTN-209	ENST00000459963	HACL1	Q9UJ83	578 aa		11.72	□□□□□ -0.53
NCSTN-209	ENST00000459963	TLL2	Q9Y6L7	1015 aa		11.72	□□□□□ -0.53
NCSTN-209	ENST00000459963	CD163L1	Q9NR16	1453 aa		11.71	□□□□□ -0.53
NCSTN-209	ENST00000459963	SMG6	Q86US8	1419 aa	Known RBP	11.71	□□□□□ -0.53
NCSTN-209	ENST00000459963	KTN1	Q86UP2	1357 aa	Known RBP	11.71	□□□□□ -0.53
NCSTN-209	ENST00000459963	POLRMT	O00411	1230 aa	Known RBP	11.71	□□□□□ -0.53
NCSTN-209	ENST00000459963	MAP3K13	O43283	966 aa		11.71	□□□□□ -0.53
NCSTN-209	ENST00000459963	EPHX2	P34913	555 aa		11.71	□□□□□ -0.53
NCSTN-209	ENST00000459963	SZT2	Q5T011	3432 aa		11.71	□□□□□ -0.54
NCSTN-209	ENST00000459963	CENPJ	Q9HC77	1338 aa	Predicted RBP	11.7	□□□□□ -0.54
NCSTN-209	ENST00000459963	RC3H1	Q5TC82	1133 aa	Known RBP	11.7	□□□□□ -0.54
NCSTN-209	ENST00000459963	CIAPIN1	Q6FI81	312 aa		11.7	□□□□□ -0.54
NCSTN-209	ENST00000459963	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	11.7	□□□□□ -0.54
NCSTN-209	ENST00000459963	RAPGEF4	Q8WZA2	1011 aa		11.7	□□□□□ -0.54
NCSTN-209	ENST00000459963	ASAP1	Q9ULH1	1129 aa		11.7	□□□□□ -0.54
NCSTN-209	ENST00000459963	DLEC1	Q9Y238	1755 aa		11.69	□□□□□ -0.54
NCSTN-209	ENST00000459963	CYP27B1	O15528	508 aa		11.69	□□□□□ -0.54
NCSTN-209	ENST00000459963	RPS6KA4	O75676	772 aa		11.69	□□□□□ -0.54
NCSTN-209	ENST00000459963	FMR1	Q06787	632 aa	Known RBP eCLIP	11.69	□□□□□ -0.54
NCSTN-209	ENST00000459963	CST9	Q5W186	159 aa		11.69	□□□□□ -0.54
NCSTN-209	ENST00000459963	NME9	Q86XW9	330 aa		11.69	□□□□□ -0.54
NCSTN-209	ENST00000459963	HPS5	Q9UPZ3	1129 aa		11.69	□□□□□ -0.54
NCSTN-209	ENST00000459963	PCDHB13	Q9Y5F0	798 aa		11.69	□□□□□ -0.54
NCSTN-209	ENST00000459963		A0A0C4DFX4	3053 aa		11.69	□□□□□ -0.54
NCSTN-209	ENST00000459963	LTBP3	Q9NS15	1303 aa		11.68	□□□□□ -0.54
NCSTN-209	ENST00000459963	TAT	P17735	454 aa	Predicted RBP	11.68	□□□□□ -0.54
NCSTN-209	ENST00000459963	LHX8	Q68G74	356 aa		11.68	□□□□□ -0.54
NCSTN-209	ENST00000459963	TAOK3	Q9H2K8	898 aa		11.68	□□□□□ -0.54
NCSTN-209	ENST00000459963	SRP68	Q9UHB9	627 aa	Known RBP	11.68	□□□□□ -0.54
NCSTN-209	ENST00000459963	RGPD2	P0DJD1	1756 aa		11.68	□□□□□ -0.54
NCSTN-209	ENST00000459963	MAP3K19	Q56UN5	1328 aa		11.67	□□□□□ -0.54
NCSTN-209	ENST00000459963	CNTNAP4	Q9C0A0	1308 aa		11.67	□□□□□ -0.54
NCSTN-209	ENST00000459963	USP42	Q9H9J4	1324 aa	Known RBP	11.67	□□□□□ -0.54
NCSTN-209	ENST00000459963	TM4SF1	P30408	202 aa		11.67	□□□□□ -0.54
NCSTN-209	ENST00000459963	CTU1	Q7Z7A3	348 aa	Known RBP	11.67	□□□□□ -0.54
NCSTN-209	ENST00000459963	FER1L6	Q2WGJ9	1857 aa		11.66	□□□□□ -0.54
NCSTN-209	ENST00000459963	C21orf2	O43822	256 aa		11.66	□□□□□ -0.54
NCSTN-209	ENST00000459963	GSE1	Q14687	1217 aa		11.66	□□□□□ -0.54
NCSTN-209	ENST00000459963	NBPF6	Q5VWK0	638 aa		11.66	□□□□□ -0.54
NCSTN-209	ENST00000459963	C2CD5	Q86YS7	1000 aa		11.66	□□□□□ -0.54
NCSTN-209	ENST00000459963	USHBP1	Q8N6Y0	703 aa		11.66	□□□□□ -0.54
NCSTN-209	ENST00000459963	NBPF4	Q96M43	638 aa		11.66	□□□□□ -0.54
NCSTN-209	ENST00000459963	TMOD3	Q9NYL9	352 aa		11.66	□□□□□ -0.54
NCSTN-209	ENST00000459963	COLQ	Q9Y215	455 aa	Predicted RBP	11.66	□□□□□ -0.54
NCSTN-209	ENST00000459963	KDR	P35968	1356 aa		11.66	□□□□□ -0.54
NCSTN-209	ENST00000459963	MKI67	P46013	3256 aa	Known RBP	11.65	□□□□□ -0.54
NCSTN-209	ENST00000459963		H0YIN7	160 aa		11.65	□□□□□ -0.54
NCSTN-209	ENST00000459963	HOXC9	P31274	260 aa		11.65	□□□□□ -0.54
NCSTN-209	ENST00000459963	SAPCD2	Q86UD0	394 aa		11.65	□□□□□ -0.54
NCSTN-209	ENST00000459963	HHIPL1	Q96JK4	782 aa		11.65	□□□□□ -0.54
NCSTN-209	ENST00000459963	ATG3	Q9NT62	314 aa		11.65	□□□□□ -0.54

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