RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 CRKLP46109 303 aaKnown RBP10.84□□□□□ -0.67
HPS4-207ENST00000459918 FKBP8Q14318 412 aa10.84□□□□□ -0.67
HPS4-207ENST00000459918 SLC4A9Q96Q91 983 aa10.84□□□□□ -0.67
HPS4-207ENST00000459918 VIRMAQ69YN4 1812 aaKnown RBP10.84□□□□□ -0.67
HPS4-207ENST00000459918 KDM6AO15550 1401 aaPredicted RBP10.84□□□□□ -0.67
HPS4-207ENST00000459918 SCN11AQ9UI33 1791 aa10.83□□□□□ -0.68
HPS4-207ENST00000459918 DLEC1Q9Y238 1755 aa10.83□□□□□ -0.68
HPS4-207ENST00000459918 KCNA3P22001 575 aa10.83□□□□□ -0.68
HPS4-207ENST00000459918 RASSF7Q02833 373 aa10.83□□□□□ -0.68
HPS4-207ENST00000459918 AMOTQ4VCS5 1084 aa10.83□□□□□ -0.68
HPS4-207ENST00000459918 AFDNP55196 1824 aaKnown RBP10.83□□□□□ -0.68
HPS4-207ENST00000459918 DDR1Q08345 913 aa10.82□□□□□ -0.68
HPS4-207ENST00000459918 JMYQ8N9B5 988 aa10.82□□□□□ -0.68
HPS4-207ENST00000459918 NFATC2IPQ8NCF5 419 aa10.82□□□□□ -0.68
HPS4-207ENST00000459918 USPL1Q5W0Q7 1092 aa10.81□□□□□ -0.68
HPS4-207ENST00000459918 ZC3H4Q9UPT8 1303 aaKnown RBP10.81□□□□□ -0.68
HPS4-207ENST00000459918 CACNA1SQ13698 1873 aa10.81□□□□□ -0.68
HPS4-207ENST00000459918 POLRMTO00411 1230 aaKnown RBP10.8□□□□□ -0.68
HPS4-207ENST00000459918 HSPA1AP0DMV8 641 aaKnown RBP10.8□□□□□ -0.68
HPS4-207ENST00000459918 HSPA1BP0DMV9 641 aaKnown RBP10.8□□□□□ -0.68
HPS4-207ENST00000459918 VEGFAP15692 232 aaPredicted RBP10.8□□□□□ -0.68
HPS4-207ENST00000459918 LMNB1P20700 586 aa10.8□□□□□ -0.68
HPS4-207ENST00000459918 NPHP1O15259 732 aa10.79□□□□□ -0.68
HPS4-207ENST00000459918 PRELPP51888 382 aa10.79□□□□□ -0.68
HPS4-207ENST00000459918 POLA2Q14181 598 aa10.79□□□□□ -0.68
HPS4-207ENST00000459918 SULT6B1Q6IMI4 303 aa10.79□□□□□ -0.68
HPS4-207ENST00000459918 AEBP1Q8IUX7 1158 aa10.79□□□□□ -0.68
HPS4-207ENST00000459918 COL15A1P39059 1388 aa10.78□□□□□ -0.68
HPS4-207ENST00000459918 H0YIN7 160 aa10.78□□□□□ -0.68
HPS4-207ENST00000459918 C2CD5Q86YS7 1000 aa10.78□□□□□ -0.68
HPS4-207ENST00000459918 DNAJC10Q8IXB1 793 aa10.78□□□□□ -0.68
HPS4-207ENST00000459918 ADAMTS7Q9UKP4 1686 aa10.78□□□□□ -0.68
HPS4-207ENST00000459918 GLTPD2A6NH11 291 aa10.77□□□□□ -0.69
HPS4-207ENST00000459918 DPY19L2Q6NUT2 758 aa10.77□□□□□ -0.69
HPS4-207ENST00000459918 BICDL1Q6ZP65 573 aa10.77□□□□□ -0.69
HPS4-207ENST00000459918 MORC1Q86VD1 984 aa10.77□□□□□ -0.69
HPS4-207ENST00000459918 TTLL6Q8N841 843 aa10.77□□□□□ -0.69
HPS4-207ENST00000459918 FOXD4L1Q9NU39 408 aa10.77□□□□□ -0.69
HPS4-207ENST00000459918 ZNF330Q9Y3S2 320 aaPredicted RBP10.77□□□□□ -0.69
HPS4-207ENST00000459918 NRXN2Q9P2S2 1712 aa10.77□□□□□ -0.69
HPS4-207ENST00000459918 SERPINB2P05120 415 aa10.76□□□□□ -0.69
HPS4-207ENST00000459918 NFIXQ14938 502 aa10.76□□□□□ -0.69
HPS4-207ENST00000459918 INTS5Q6P9B9 1019 aaKnown RBP10.76□□□□□ -0.69
HPS4-207ENST00000459918 NPM2Q86SE8 214 aaKnown RBP10.76□□□□□ -0.69
HPS4-207ENST00000459918 ZNF622Q969S3 477 aaKnown RBP eCLIP10.76□□□□□ -0.698e-7■□□□□ 8.8
HPS4-207ENST00000459918 NARFQ9UHQ1 456 aa10.76□□□□□ -0.69
HPS4-207ENST00000459918 SOS1Q07889 1333 aaPredicted RBP10.76□□□□□ -0.69
HPS4-207ENST00000459918 DICER1Q9UPY3 1922 aaKnown RBP10.76□□□□□ -0.69
HPS4-207ENST00000459918 CANXP27824 592 aaKnown RBP10.75□□□□□ -0.69
HPS4-207ENST00000459918 TM4SF1P30408 202 aa10.75□□□□□ -0.69
HPS4-207ENST00000459918 ERFEQ4G0M1 354 aa10.75□□□□□ -0.69
HPS4-207ENST00000459918 AKAP4Q5JQC9 854 aa10.75□□□□□ -0.69
HPS4-207ENST00000459918 SLC52A2Q9HAB3 445 aa10.75□□□□□ -0.69
HPS4-207ENST00000459918 SLC39A6Q13433 755 aa10.74□□□□□ -0.69
HPS4-207ENST00000459918 TTC5Q8N0Z6 440 aa10.74□□□□□ -0.69
HPS4-207ENST00000459918 PANK3Q9H999 370 aa10.74□□□□□ -0.69
HPS4-207ENST00000459918 MKRN1Q9UHC7 482 aaKnown RBP10.74□□□□□ -0.69
HPS4-207ENST00000459918 ZBTB1Q9Y2K1 713 aa10.74□□□□□ -0.69
HPS4-207ENST00000459918 COL11A2P13942 1736 aaPredicted RBP10.74□□□□□ -0.69
HPS4-207ENST00000459918 ANKRD31Q8N7Z5 1873 aa10.74□□□□□ -0.69
HPS4-207ENST00000459918 SCN7AQ01118 1682 aa10.73□□□□□ -0.69
HPS4-207ENST00000459918 C21orf2O43822 256 aa10.73□□□□□ -0.69
HPS4-207ENST00000459918 CYP19A1P11511 503 aaPredicted RBP10.73□□□□□ -0.69
HPS4-207ENST00000459918 AIDAQ96BJ3 306 aa10.73□□□□□ -0.69
HPS4-207ENST00000459918 CARMIL3Q8ND23 1372 aa10.73□□□□□ -0.69
HPS4-207ENST00000459918 UBR2Q8IWV8 1755 aa10.72□□□□□ -0.69
HPS4-207ENST00000459918 FER1L6Q2WGJ9 1857 aa10.72□□□□□ -0.69
HPS4-207ENST00000459918 HMOX1P09601 288 aa10.72□□□□□ -0.69
HPS4-207ENST00000459918 PDE6BP35913 854 aa10.72□□□□□ -0.69
HPS4-207ENST00000459918 TAOK3Q9H2K8 898 aa10.72□□□□□ -0.69
HPS4-207ENST00000459918 MRC1P22897 1456 aa10.72□□□□□ -0.69
HPS4-207ENST00000459918 A0A087WZG4 1122 aa10.71□□□□□ -0.69
HPS4-207ENST00000459918 NFKBIEO00221 500 aa10.71□□□□□ -0.69
HPS4-207ENST00000459918 STARD3NLO95772 234 aa10.71□□□□□ -0.69
HPS4-207ENST00000459918 CHADLQ6NUI6 762 aa10.71□□□□□ -0.69
HPS4-207ENST00000459918 CCDC24Q8N4L8 307 aa10.71□□□□□ -0.69
HPS4-207ENST00000459918 LGR6Q9HBX8 967 aa10.71□□□□□ -0.69
HPS4-207ENST00000459918 CREBZFQ9NS37 354 aa10.71□□□□□ -0.69
HPS4-207ENST00000459918 KNSTRNQ9Y448 316 aa10.71□□□□□ -0.69
HPS4-207ENST00000459918 ARFGEF2Q9Y6D5 1785 aa10.7□□□□□ -0.7
HPS4-207ENST00000459918 RNMTO43148 476 aaKnown RBP10.7□□□□□ -0.7
HPS4-207ENST00000459918 EIF4G2P78344 907 aaKnown RBP eCLIP10.7□□□□□ -0.7
HPS4-207ENST00000459918 PDZRN3Q9UPQ7 1066 aa10.7□□□□□ -0.7
HPS4-207ENST00000459918 IQCA1LA6NCM1 817 aa10.69□□□□□ -0.7
HPS4-207ENST00000459918 IL13P35225 146 aa10.69□□□□□ -0.7
HPS4-207ENST00000459918 ST5P78524 1137 aa10.69□□□□□ -0.7
HPS4-207ENST00000459918 TEFQ10587 303 aa10.69□□□□□ -0.7
HPS4-207ENST00000459918 CNBD1Q8NA66 436 aa10.69□□□□□ -0.7
HPS4-207ENST00000459918 CLEC11AQ9Y240 323 aa10.69□□□□□ -0.7
HPS4-207ENST00000459918 SCN4AP35499 1836 aa10.69□□□□□ -0.7
HPS4-207ENST00000459918 DDNO94850 711 aaPredicted RBP10.68□□□□□ -0.7
HPS4-207ENST00000459918 EAPPQ56P03 285 aaPredicted RBP10.68□□□□□ -0.7
HPS4-207ENST00000459918 SOGA3Q5TF21 947 aa10.68□□□□□ -0.7
HPS4-207ENST00000459918 TBC1D9BQ66K14 1250 aa10.68□□□□□ -0.7
HPS4-207ENST00000459918 VSIG10Q8N0Z9 540 aa10.68□□□□□ -0.7
HPS4-207ENST00000459918 CNKSR1Q969H4 720 aa10.68□□□□□ -0.7
HPS4-207ENST00000459918 SETDB2Q96T68 719 aa10.68□□□□□ -0.7
HPS4-207ENST00000459918 BRIP1Q9BX63 1249 aa10.68□□□□□ -0.7
HPS4-207ENST00000459918 BCL2L12Q9HB09 334 aa10.68□□□□□ -0.7
HPS4-207ENST00000459918 TBC1D2BQ9UPU7 963 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms