RNA–Protein interactions for RNA: ENST00000458640.5

DDX39B-214, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-214ENST00000458640 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.72□□□□□ -0.21
DDX39B-214ENST00000458640 MED1Q15648 1581 aaPredicted RBP13.72□□□□□ -0.21
DDX39B-214ENST00000458640 GAS2L2Q8NHY3 880 aa13.71□□□□□ -0.21
DDX39B-214ENST00000458640 ABCC6O95255 1503 aa13.71□□□□□ -0.21
DDX39B-214ENST00000458640 APPP05067 770 aa13.71□□□□□ -0.22
DDX39B-214ENST00000458640 U2AF2P26368 475 aaKnown RBP eCLIP13.71□□□□□ -0.224e-14■■■■□ 23
DDX39B-214ENST00000458640 FAM184AQ8NB25 1140 aa13.71□□□□□ -0.22
DDX39B-214ENST00000458640 TSR2Q969E8 191 aaKnown RBP13.71□□□□□ -0.22
DDX39B-214ENST00000458640 TRIM6-TRIM34B2RNG4 842 aa13.7□□□□□ -0.22
DDX39B-214ENST00000458640 K7ELQ4 463 aaPredicted RBP13.7□□□□□ -0.22
DDX39B-214ENST00000458640 CAPN2P17655 700 aa13.7□□□□□ -0.22
DDX39B-214ENST00000458640 PRIM1P49642 420 aaKnown RBP13.7□□□□□ -0.22
DDX39B-214ENST00000458640 RARSP54136 660 aaKnown RBP13.7□□□□□ -0.22
DDX39B-214ENST00000458640 ARHGEF25Q86VW2 580 aa13.7□□□□□ -0.22
DDX39B-214ENST00000458640 ZNF428Q96B54 188 aa13.7□□□□□ -0.22
DDX39B-214ENST00000458640 TRIM34Q9BYJ4 488 aa13.7□□□□□ -0.22
DDX39B-214ENST00000458640 CTNNA3Q9UI47 895 aa13.7□□□□□ -0.22
DDX39B-214ENST00000458640 RAD50Q92878 1312 aa13.69□□□□□ -0.22
DDX39B-214ENST00000458640 CRYBG1Q9Y4K1 1723 aa13.69□□□□□ -0.22
DDX39B-214ENST00000458640 ZBTB7CA1YPR0 619 aa13.69□□□□□ -0.22
DDX39B-214ENST00000458640 BCAR3O75815 825 aa13.69□□□□□ -0.22
DDX39B-214ENST00000458640 MBD3O95983 291 aa13.69□□□□□ -0.22
DDX39B-214ENST00000458640 EXOSC9Q06265 439 aaKnown RBP13.69□□□□□ -0.22
DDX39B-214ENST00000458640 CAVIN1Q6NZI2 390 aaKnown RBP13.69□□□□□ -0.22
DDX39B-214ENST00000458640 BRINP3Q76B58 766 aa13.69□□□□□ -0.22
DDX39B-214ENST00000458640 CEP120Q8N960 986 aa13.69□□□□□ -0.22
DDX39B-214ENST00000458640 LTV1Q96GA3 475 aaPredicted RBP13.69□□□□□ -0.22
DDX39B-214ENST00000458640 BRMS1Q9HCU9 246 aa13.69□□□□□ -0.22
DDX39B-214ENST00000458640 LMBRD1Q9NUN5 540 aa13.69□□□□□ -0.22
DDX39B-214ENST00000458640 SLAIN2Q9P270 581 aa13.69□□□□□ -0.22
DDX39B-214ENST00000458640 FAM208AQ9UK61 1670 aaKnown RBP13.68□□□□□ -0.22
DDX39B-214ENST00000458640 CAMTA1Q9Y6Y1 1673 aa13.68□□□□□ -0.22
DDX39B-214ENST00000458640 KRT222Q8N1A0 295 aa13.68□□□□□ -0.22
DDX39B-214ENST00000458640 RTF1Q92541 710 aaKnown RBP13.68□□□□□ -0.22
DDX39B-214ENST00000458640 CFAP44Q96MT7 982 aa13.68□□□□□ -0.22
DDX39B-214ENST00000458640 SPATA31A3Q5VYP0 1347 aa13.68□□□□□ -0.22
DDX39B-214ENST00000458640 FEZ2Q9UHY8 353 aaPredicted RBP13.68□□□□□ -0.22
DDX39B-214ENST00000458640 KIF16BQ96L93 1317 aa13.67□□□□□ -0.22
DDX39B-214ENST00000458640 NHSL1Q5SYE7 1610 aa13.67□□□□□ -0.22
DDX39B-214ENST00000458640 HAP1P54257 671 aaPredicted RBP13.67□□□□□ -0.22
DDX39B-214ENST00000458640 CWC22Q9HCG8 908 aaKnown RBP13.67□□□□□ -0.22
DDX39B-214ENST00000458640 HTATSF1O43719 755 aaKnown RBP13.66□□□□□ -0.22
DDX39B-214ENST00000458640 ZNF853P0CG23 659 aa13.66□□□□□ -0.22
DDX39B-214ENST00000458640 SAMD1Q6SPF0 538 aaPredicted RBP13.66□□□□□ -0.22
DDX39B-214ENST00000458640 LRRC37A3O60309 1634 aa13.66□□□□□ -0.22
DDX39B-214ENST00000458640 TNNT3P45378 269 aaPredicted RBP13.66□□□□□ -0.22
DDX39B-214ENST00000458640 THUMPD2Q9BTF0 503 aaKnown RBP13.66□□□□□ -0.22
DDX39B-214ENST00000458640 SMC4Q9NTJ3 1288 aa13.66□□□□□ -0.22
DDX39B-214ENST00000458640 SSFA2P28290 1259 aa13.65□□□□□ -0.22
DDX39B-214ENST00000458640 MTHFSDQ2M296 383 aaKnown RBP13.65□□□□□ -0.22
DDX39B-214ENST00000458640 ALDH1L2Q3SY69 923 aa13.65□□□□□ -0.22
DDX39B-214ENST00000458640 FAM53CQ9NYF3 392 aa13.65□□□□□ -0.22
DDX39B-214ENST00000458640 NCAPD2Q15021 1401 aa13.65□□□□□ -0.22
DDX39B-214ENST00000458640 RGPD2P0DJD1 1756 aa13.65□□□□□ -0.22
DDX39B-214ENST00000458640 SOS2Q07890 1332 aaPredicted RBP13.64□□□□□ -0.23
DDX39B-214ENST00000458640 FAM83GA6ND36 823 aa13.64□□□□□ -0.23
DDX39B-214ENST00000458640 CYP2E1P05181 493 aaPredicted RBP13.64□□□□□ -0.23
DDX39B-214ENST00000458640 CNKSR2Q8WXI2 1034 aa13.64□□□□□ -0.23
DDX39B-214ENST00000458640 DDX17Q92841 729 aaKnown RBP13.64□□□□□ -0.23
DDX39B-214ENST00000458640 SYAP1Q96A49 352 aaPredicted RBP13.64□□□□□ -0.23
DDX39B-214ENST00000458640 MYCBPQ99417 103 aaPredicted RBP13.64□□□□□ -0.23
DDX39B-214ENST00000458640 RGPD5Q99666 1765 aa13.64□□□□□ -0.23
DDX39B-214ENST00000458640 MAP3K5Q99683 1374 aa13.64□□□□□ -0.23
DDX39B-214ENST00000458640 PHF14O94880 888 aa13.64□□□□□ -0.23
DDX39B-214ENST00000458640 MBIPQ9NS73 344 aa13.64□□□□□ -0.23
DDX39B-214ENST00000458640 CPDO75976 1380 aa13.63□□□□□ -0.23
DDX39B-214ENST00000458640 GNAT3A8MTJ3 354 aa13.63□□□□□ -0.23
DDX39B-214ENST00000458640 ANKRD24Q8TF21 1146 aa13.63□□□□□ -0.23
DDX39B-214ENST00000458640 ERBB3P21860 1342 aa13.63□□□□□ -0.23
DDX39B-214ENST00000458640 LMO7Q8WWI1 1683 aa13.63□□□□□ -0.23
DDX39B-214ENST00000458640 RIOK3O14730 519 aaKnown RBP13.63□□□□□ -0.23
DDX39B-214ENST00000458640 IGSF3O75054 1194 aa13.63□□□□□ -0.23
DDX39B-214ENST00000458640 REC8O95072 547 aa13.63□□□□□ -0.23
DDX39B-214ENST00000458640 DCTN1Q14203 1278 aa13.63□□□□□ -0.23
DDX39B-214ENST00000458640 NBPF6Q5VWK0 638 aa13.63□□□□□ -0.23
DDX39B-214ENST00000458640 ZKSCAN2Q63HK3 967 aa13.63□□□□□ -0.23
DDX39B-214ENST00000458640 TSC1Q92574 1164 aa13.63□□□□□ -0.23
DDX39B-214ENST00000458640 NBPF4Q96M43 638 aa13.63□□□□□ -0.23
DDX39B-214ENST00000458640 NCAPGQ9BPX3 1015 aa13.63□□□□□ -0.23
DDX39B-214ENST00000458640 BCL2L13Q9BXK5 485 aa13.63□□□□□ -0.23
DDX39B-214ENST00000458640 TSPY26PQ9H489 355 aa13.63□□□□□ -0.23
DDX39B-214ENST00000458640 ZC3H6P61129 1189 aaKnown RBP13.62□□□□□ -0.23
DDX39B-214ENST00000458640 MCTP1Q6DN14 999 aa13.62□□□□□ -0.23
DDX39B-214ENST00000458640 MCM10Q7L590 875 aa13.62□□□□□ -0.23
DDX39B-214ENST00000458640 KIF18AQ8NI77 898 aa13.62□□□□□ -0.23
DDX39B-214ENST00000458640 COL18A1P39060 1754 aa13.62□□□□□ -0.23
DDX39B-214ENST00000458640 ABCA3Q99758 1704 aa13.62□□□□□ -0.23
DDX39B-214ENST00000458640 PLEKHG2Q9H7P9 1386 aa13.62□□□□□ -0.23
DDX39B-214ENST00000458640 IPO8O15397 1037 aaKnown RBP13.61□□□□□ -0.23
DDX39B-214ENST00000458640 AMOTQ4VCS5 1084 aa13.61□□□□□ -0.23
DDX39B-214ENST00000458640 MUM1L1Q5H9M0 696 aa13.61□□□□□ -0.23
DDX39B-214ENST00000458640 RASSF4Q9H2L5 321 aa13.61□□□□□ -0.23
DDX39B-214ENST00000458640 CRB1P82279 1406 aa13.61□□□□□ -0.23
DDX39B-214ENST00000458640 KIAA0232Q92628 1395 aa13.61□□□□□ -0.23
DDX39B-214ENST00000458640 NOP2P46087 812 aaKnown RBP13.61□□□□□ -0.23
DDX39B-214ENST00000458640 TWISTNBQ3B726 338 aaPredicted RBP13.61□□□□□ -0.23
DDX39B-214ENST00000458640 USHBP1Q8N6Y0 703 aa13.61□□□□□ -0.23
DDX39B-214ENST00000458640 SSH1Q8WYL5 1049 aa13.61□□□□□ -0.23
DDX39B-214ENST00000458640 COG6Q9Y2V7 657 aa13.61□□□□□ -0.23
DDX39B-214ENST00000458640 GOLGA6L6A8MZA4 724 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms