RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 RASEFQ8IZ41 740 aa17.17■□□□□ 0.34
SCFD1-203ENST00000458591 RHPN1Q8TCX5 695 aa17.17■□□□□ 0.34
SCFD1-203ENST00000458591 PIK3C2AO00443 1686 aa17.17■□□□□ 0.34
SCFD1-203ENST00000458591 HTATSF1O43719 755 aaKnown RBP17.17■□□□□ 0.34
SCFD1-203ENST00000458591 KIAA1211Q6ZU35 1233 aa17.17■□□□□ 0.34
SCFD1-203ENST00000458591 DDX54Q8TDD1 881 aaKnown RBP17.17■□□□□ 0.34
SCFD1-203ENST00000458591 SPG7Q9UQ90 795 aa17.17■□□□□ 0.34
SCFD1-203ENST00000458591 XRN1Q8IZH2 1706 aaKnown RBP17.17■□□□□ 0.34
SCFD1-203ENST00000458591 FMN2Q9NZ56 1722 aa17.17■□□□□ 0.34
SCFD1-203ENST00000458591 PI4KAP2A4QPH2 592 aa17.16■□□□□ 0.34
SCFD1-203ENST00000458591 HSP90AA2PQ14568 343 aaPredicted RBP17.16■□□□□ 0.34
SCFD1-203ENST00000458591 NBPF6Q5VWK0 638 aa17.16■□□□□ 0.34
SCFD1-203ENST00000458591 PI4KAP1Q8N8J0 262 aa17.16■□□□□ 0.34
SCFD1-203ENST00000458591 NBPF4Q96M43 638 aa17.16■□□□□ 0.34
SCFD1-203ENST00000458591 SRCIN1Q9C0H9 1055 aa17.16■□□□□ 0.34
SCFD1-203ENST00000458591 NWD1Q149M9 1564 aa17.16■□□□□ 0.34
SCFD1-203ENST00000458591 MSNP26038 577 aaKnown RBP17.16■□□□□ 0.34
SCFD1-203ENST00000458591 XPCQ01831 940 aaPredicted RBP17.16■□□□□ 0.34
SCFD1-203ENST00000458591 DIP2AQ14689 1571 aa17.15■□□□□ 0.34
SCFD1-203ENST00000458591 HSPA4P34932 840 aa17.15■□□□□ 0.34
SCFD1-203ENST00000458591 CWC27Q6UX04 472 aaKnown RBP17.15■□□□□ 0.34
SCFD1-203ENST00000458591 LRRC59Q96AG4 307 aaKnown RBP17.15■□□□□ 0.34
SCFD1-203ENST00000458591 TBX22Q9Y458 520 aa17.15■□□□□ 0.34
SCFD1-203ENST00000458591 USP48Q86UV5 1035 aa17.15■□□□□ 0.34
SCFD1-203ENST00000458591 PDLIM2Q96JY6 352 aa17.15■□□□□ 0.34
SCFD1-203ENST00000458591 SNX14Q9Y5W7 946 aa17.15■□□□□ 0.34
SCFD1-203ENST00000458591 ANAPC15P60006 121 aa17.14■□□□□ 0.33
SCFD1-203ENST00000458591 POLA2Q14181 598 aa17.14■□□□□ 0.33
SCFD1-203ENST00000458591 FAM208AQ9UK61 1670 aaKnown RBP17.14■□□□□ 0.33
SCFD1-203ENST00000458591 PRAMEF22A3QJZ6 481 aa17.14■□□□□ 0.33
SCFD1-203ENST00000458591 TPM2P07951 284 aa17.14■□□□□ 0.33
SCFD1-203ENST00000458591 MCM2P49736 904 aa17.14■□□□□ 0.33
SCFD1-203ENST00000458591 EIF4A1P60842 406 aaKnown RBP17.14■□□□□ 0.33
SCFD1-203ENST00000458591 BEND3Q5T5X7 828 aa17.13■□□□□ 0.33
SCFD1-203ENST00000458591 MPRIPQ6WCQ1 1025 aa17.13■□□□□ 0.33
SCFD1-203ENST00000458591 SGSM2O43147 1006 aa17.13■□□□□ 0.33
SCFD1-203ENST00000458591 LARGE1O95461 756 aa17.13■□□□□ 0.33
SCFD1-203ENST00000458591 LSG1Q9H089 658 aaKnown RBP17.13■□□□□ 0.33
SCFD1-203ENST00000458591 PA2G4Q9UQ80 394 aaKnown RBP17.13■□□□□ 0.33
SCFD1-203ENST00000458591 AK2P54819 239 aa17.12■□□□□ 0.33
SCFD1-203ENST00000458591 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.12■□□□□ 0.33
SCFD1-203ENST00000458591 TUBGCP6Q96RT7 1819 aa17.12■□□□□ 0.33
SCFD1-203ENST00000458591 COL9A3Q14050 684 aaPredicted RBP17.11■□□□□ 0.33
SCFD1-203ENST00000458591 INTS4Q96HW7 963 aaKnown RBP17.11■□□□□ 0.33
SCFD1-203ENST00000458591 CNPY2Q9Y2B0 182 aa17.11■□□□□ 0.33
SCFD1-203ENST00000458591 RPAP1Q9BWH6 1393 aaPredicted RBP17.11■□□□□ 0.33
SCFD1-203ENST00000458591 PROSER3Q2NL68 480 aa17.11■□□□□ 0.33
SCFD1-203ENST00000458591 DNAAF4Q8WXU2 420 aa17.11■□□□□ 0.33
SCFD1-203ENST00000458591 R3HCC1Q9Y3T6 440 aaKnown RBP17.11■□□□□ 0.33
SCFD1-203ENST00000458591 LRRC37A3O60309 1634 aa17.11■□□□□ 0.33
SCFD1-203ENST00000458591 OFD1O75665 1012 aa17.1■□□□□ 0.33
SCFD1-203ENST00000458591 PTH1RQ03431 593 aa17.1■□□□□ 0.33
SCFD1-203ENST00000458591 RUFY3Q7L099 469 aa17.1■□□□□ 0.33
SCFD1-203ENST00000458591 NOL7Q9UMY1 257 aaKnown RBP17.1■□□□□ 0.33
SCFD1-203ENST00000458591 OS9Q13438 667 aaPredicted RBP17.1■□□□□ 0.33
SCFD1-203ENST00000458591 MBD3O95983 291 aa17.09■□□□□ 0.33
SCFD1-203ENST00000458591 ADCK5Q3MIX3 580 aa17.09■□□□□ 0.33
SCFD1-203ENST00000458591 KIF1BPQ96EK5 621 aa17.09■□□□□ 0.33
SCFD1-203ENST00000458591 RAD50Q92878 1312 aa17.09■□□□□ 0.33
SCFD1-203ENST00000458591 RAB11FIP3O75154 756 aa17.09■□□□□ 0.33
SCFD1-203ENST00000458591 TTC14Q96N46 770 aa17.09■□□□□ 0.33
SCFD1-203ENST00000458591 RBM10P98175 930 aaKnown RBP17.08■□□□□ 0.33
SCFD1-203ENST00000458591 CWF19L2Q2TBE0 894 aaKnown RBP17.08■□□□□ 0.33
SCFD1-203ENST00000458591 TSPY26PQ9H489 355 aa17.08■□□□□ 0.33
SCFD1-203ENST00000458591 ADCY9O60503 1353 aa17.08■□□□□ 0.32
SCFD1-203ENST00000458591 SETD1BQ9UPS6 1966 aaKnown RBP17.08■□□□□ 0.32
SCFD1-203ENST00000458591 BTBD11A6QL63 1104 aa17.08■□□□□ 0.32
SCFD1-203ENST00000458591 AOX1Q06278 1338 aa17.07■□□□□ 0.32
SCFD1-203ENST00000458591 CASTP20810 708 aaKnown RBP17.07■□□□□ 0.32
SCFD1-203ENST00000458591 CNTROBQ8N137 903 aa17.07■□□□□ 0.32
SCFD1-203ENST00000458591 IL17RAQ96F46 866 aa17.07■□□□□ 0.32
SCFD1-203ENST00000458591 ZNF830Q96NB3 372 aaPredicted RBP17.07■□□□□ 0.32
SCFD1-203ENST00000458591 KIF13AQ9H1H9 1805 aa17.07■□□□□ 0.32
SCFD1-203ENST00000458591 WDR33Q9C0J8 1336 aaKnown RBP17.06■□□□□ 0.32
SCFD1-203ENST00000458591 SYT1P21579 422 aa17.06■□□□□ 0.32
SCFD1-203ENST00000458591 HS1BP3Q53T59 392 aa17.06■□□□□ 0.32
SCFD1-203ENST00000458591 PRPF40BQ6NWY9 871 aaKnown RBP17.06■□□□□ 0.32
SCFD1-203ENST00000458591 ZNF530Q6P9A1 599 aaPredicted RBP17.06■□□□□ 0.32
SCFD1-203ENST00000458591 CCDC83Q8IWF9 413 aa17.06■□□□□ 0.32
SCFD1-203ENST00000458591 IP6K1Q92551 441 aa17.06■□□□□ 0.32
SCFD1-203ENST00000458591 PHF8Q9UPP1 1060 aa17.06■□□□□ 0.32
SCFD1-203ENST00000458591 MAP3K2Q9Y2U5 619 aa17.06■□□□□ 0.32
SCFD1-203ENST00000458591 CEMIPQ8WUJ3 1361 aa17.06■□□□□ 0.32
SCFD1-203ENST00000458591 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.06■□□□□ 0.32
SCFD1-203ENST00000458591 ZKSCAN5Q9Y2L8 839 aa17.06■□□□□ 0.32
SCFD1-203ENST00000458591 MARF1Q9Y4F3 1742 aaKnown RBP17.05■□□□□ 0.32
SCFD1-203ENST00000458591 FIBPO43427 364 aa17.05■□□□□ 0.32
SCFD1-203ENST00000458591 TEFQ10587 303 aa17.05■□□□□ 0.32
SCFD1-203ENST00000458591 THEMISQ8N1K5 641 aaPredicted RBP17.04■□□□□ 0.32
SCFD1-203ENST00000458591 PXDNLA1KZ92 1463 aa17.04■□□□□ 0.32
SCFD1-203ENST00000458591 AIMP1Q12904 312 aaKnown RBP17.04■□□□□ 0.32
SCFD1-203ENST00000458591 NECAB1Q8N987 351 aa17.04■□□□□ 0.32
SCFD1-203ENST00000458591 BABAM1Q9NWV8 329 aa17.04■□□□□ 0.32
SCFD1-203ENST00000458591 ZSCAN22P10073 491 aaPredicted RBP17.03■□□□□ 0.32
SCFD1-203ENST00000458591 ST3GAL1Q11201 340 aa17.03■□□□□ 0.32
SCFD1-203ENST00000458591 JAKMIP1Q96N16 626 aaKnown RBP17.03■□□□□ 0.32
SCFD1-203ENST00000458591 C9orf78Q9NZ63 289 aaPredicted RBP17.03■□□□□ 0.32
SCFD1-203ENST00000458591 LIMCH1Q9UPQ0 1083 aa17.03■□□□□ 0.32
SCFD1-203ENST00000458591 ARHGAP23Q9P227 1491 aa17.03■□□□□ 0.32
SCFD1-203ENST00000458591 STX6O43752 255 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms