RNA–Protein interactions for RNA: ENST00000457586.1

PRNP-204, Transcript of prion protein, humanhuman

TSL 1 (best)

Gene PRNP, Length 855 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-204ENST00000457586 COL15A1P39059 1388 aa31.27■■■□□ 2.6
PRNP-204ENST00000457586 MYBBP1AQ9BQG0 1328 aaKnown RBP31.26■■■□□ 2.6
PRNP-204ENST00000457586 C10orf71Q711Q0 1435 aa31.26■■■□□ 2.6
PRNP-204ENST00000457586 GRIN3BO60391 1043 aa31.26■■■□□ 2.59
PRNP-204ENST00000457586 ZEB1P37275 1124 aaPredicted RBP31.26■■■□□ 2.59
PRNP-204ENST00000457586 KIAA1551Q9HCM1 1747 aa31.25■■■□□ 2.59
PRNP-204ENST00000457586 PELP1Q8IZL8 1130 aaKnown RBP31.25■■■□□ 2.59
PRNP-204ENST00000457586 FKBP8Q14318 412 aa31.24■■■□□ 2.59
PRNP-204ENST00000457586 NARFQ9UHQ1 456 aa31.24■■■□□ 2.59
PRNP-204ENST00000457586 KCNQ3O43525 872 aa31.23■■■□□ 2.59
PRNP-204ENST00000457586 ZPR1O75312 459 aa31.23■■■□□ 2.59
PRNP-204ENST00000457586 PARP3Q9Y6F1 533 aa31.23■■■□□ 2.59
PRNP-204ENST00000457586 EIF5P55010 431 aaKnown RBP31.22■■■□□ 2.59
PRNP-204ENST00000457586 DCTN1Q14203 1278 aa31.22■■■□□ 2.59
PRNP-204ENST00000457586 NFE2L2Q16236 605 aa31.22■■■□□ 2.59
PRNP-204ENST00000457586 TGFB2P61812 414 aa31.21■■■□□ 2.59
PRNP-204ENST00000457586 PXDNLA1KZ92 1463 aa31.21■■■□□ 2.59
PRNP-204ENST00000457586 TM4SF1P30408 202 aa31.2■■■□□ 2.59
PRNP-204ENST00000457586 DDR1Q08345 913 aa31.19■■■□□ 2.58
PRNP-204ENST00000457586 TAF7Q15545 349 aaPredicted RBP31.19■■■□□ 2.58
PRNP-204ENST00000457586 USPL1Q5W0Q7 1092 aa31.19■■■□□ 2.58
PRNP-204ENST00000457586 CANXP27824 592 aaKnown RBP31.18■■■□□ 2.58
PRNP-204ENST00000457586 A0A087WZG4 1122 aa31.17■■■□□ 2.58
PRNP-204ENST00000457586 IL6STP40189 918 aaPredicted RBP31.17■■■□□ 2.58
PRNP-204ENST00000457586 MAPK8IP3Q9UPT6 1336 aa31.17■■■□□ 2.58
PRNP-204ENST00000457586 BCL2L12Q9HB09 334 aa31.16■■■□□ 2.58
PRNP-204ENST00000457586 N4BP2Q86UW6 1770 aaPredicted RBP31.15■■■□□ 2.58
PRNP-204ENST00000457586 POLRMTO00411 1230 aaKnown RBP31.15■■■□□ 2.58
PRNP-204ENST00000457586 PRKRIP1Q9H875 184 aaPredicted RBP31.15■■■□□ 2.58
PRNP-204ENST00000457586 KDM3BQ7LBC6 1761 aa31.15■■■□□ 2.58
PRNP-204ENST00000457586 SNRPA1P09661 255 aaKnown RBP31.14■■■□□ 2.58
PRNP-204ENST00000457586 NRXN2Q9P2S2 1712 aa31.14■■■□□ 2.58
PRNP-204ENST00000457586 BRCA1P38398 1863 aaKnown RBP31.14■■■□□ 2.58
PRNP-204ENST00000457586 SCN7AQ01118 1682 aa31.13■■■□□ 2.57
PRNP-204ENST00000457586 PNISRQ8TF01 805 aaKnown RBP31.13■■■□□ 2.57
PRNP-204ENST00000457586 ZNF784Q8NCA9 323 aaPredicted RBP31.12■■■□□ 2.57
PRNP-204ENST00000457586 USP16Q9Y5T5 823 aa31.12■■■□□ 2.57
PRNP-204ENST00000457586 AFDNP55196 1824 aaKnown RBP31.12■■■□□ 2.57
PRNP-204ENST00000457586 A1BGP04217 495 aa31.11■■■□□ 2.57
PRNP-204ENST00000457586 NFIXQ14938 502 aa31.11■■■□□ 2.57
PRNP-204ENST00000457586 A0A0G2JLW4 131 aa31.08■■■□□ 2.57
PRNP-204ENST00000457586 LAMB4A4D0S4 1761 aa31.07■■■□□ 2.56
PRNP-204ENST00000457586 PRAMEF22A3QJZ6 481 aa31.07■■■□□ 2.56
PRNP-204ENST00000457586 DPEP1P16444 411 aa31.07■■■□□ 2.56
PRNP-204ENST00000457586 KCNA3P22001 575 aa31.06■■■□□ 2.56
PRNP-204ENST00000457586 MIS18AQ9NYP9 233 aa31.06■■■□□ 2.56
PRNP-204ENST00000457586 BCORQ6W2J9 1755 aa31.05■■■□□ 2.56
PRNP-204ENST00000457586 TMPOP42166 694 aaKnown RBP31.04■■■□□ 2.56
PRNP-204ENST00000457586 RIPK4P57078 832 aa31.04■■■□□ 2.56
PRNP-204ENST00000457586 THUMPD2Q9BTF0 503 aaKnown RBP31.04■■■□□ 2.56
PRNP-204ENST00000457586 TBC1D2BQ9UPU7 963 aa31.04■■■□□ 2.56
PRNP-204ENST00000457586 NPM2Q86SE8 214 aaKnown RBP31.03■■■□□ 2.56
PRNP-204ENST00000457586 WWC3Q9ULE0 1092 aa31.03■■■□□ 2.56
PRNP-204ENST00000457586 ARFGEF1Q9Y6D6 1849 aa31.03■■■□□ 2.56
PRNP-204ENST00000457586 CAMTA2O94983 1202 aa31.02■■■□□ 2.56
PRNP-204ENST00000457586 SERPINB2P05120 415 aa31.02■■■□□ 2.56
PRNP-204ENST00000457586 EIF4A1P60842 406 aaKnown RBP31.02■■■□□ 2.56
PRNP-204ENST00000457586 LMOD3Q0VAK6 560 aa31.02■■■□□ 2.56
PRNP-204ENST00000457586 ZNF330Q9Y3S2 320 aaPredicted RBP31.02■■■□□ 2.56
PRNP-204ENST00000457586 WDR43Q15061 677 aaKnown RBP eCLIP31.01■■■□□ 2.55
PRNP-204ENST00000457586 BABAM1Q9NWV8 329 aa31.01■■■□□ 2.55
PRNP-204ENST00000457586 NBPF26B4DH59 902 aa31■■■□□ 2.55
PRNP-204ENST00000457586 GIGYF1O75420 1035 aaPredicted RBP31■■■□□ 2.55
PRNP-204ENST00000457586 TBC1D9BQ66K14 1250 aa31■■■□□ 2.55
PRNP-204ENST00000457586 NBPF10Q6P3W6 841 aaKnown RBP31■■■□□ 2.55
PRNP-204ENST00000457586 NBPF15Q8N660 670 aa31■■■□□ 2.55
PRNP-204ENST00000457586 RUNDC1Q96C34 613 aa31■■■□□ 2.55
PRNP-204ENST00000457586 RGL2O15211 777 aa30.99■■■□□ 2.55
PRNP-204ENST00000457586 DZIP3Q86Y13 1208 aaKnown RBP30.99■■■□□ 2.55
PRNP-204ENST00000457586 PIM2Q9P1W9 311 aa30.99■■■□□ 2.55
PRNP-204ENST00000457586 BCS1LQ9Y276 419 aa30.99■■■□□ 2.55
PRNP-204ENST00000457586 ADCY9O60503 1353 aa30.98■■■□□ 2.55
PRNP-204ENST00000457586 ADAMTS8Q9UP79 889 aa30.98■■■□□ 2.55
PRNP-204ENST00000457586 CARMIL3Q8ND23 1372 aa30.97■■■□□ 2.55
PRNP-204ENST00000457586 PIP4K2AP48426 406 aaPredicted RBP30.97■■■□□ 2.55
PRNP-204ENST00000457586 CLEC4GQ6UXB4 293 aa30.97■■■□□ 2.55
PRNP-204ENST00000457586 DLEC1Q9Y238 1755 aa30.97■■■□□ 2.55
PRNP-204ENST00000457586 CCDC146Q8IYE0 955 aa30.96■■■□□ 2.55
PRNP-204ENST00000457586 CHRNA5P30532 468 aa30.94■■■□□ 2.54
PRNP-204ENST00000457586 BICDL1Q6ZP65 573 aa30.94■■■□□ 2.54
PRNP-204ENST00000457586 DALRD3Q5D0E6 543 aaKnown RBP30.93■■■□□ 2.54
PRNP-204ENST00000457586 TSPYL4Q9UJ04 414 aa30.93■■■□□ 2.54
PRNP-204ENST00000457586 SETDB2Q96T68 719 aa30.92■■■□□ 2.54
PRNP-204ENST00000457586 ANKRD31Q8N7Z5 1873 aa30.92■■■□□ 2.54
PRNP-204ENST00000457586 TRIM35Q9UPQ4 493 aa30.91■■■□□ 2.54
PRNP-204ENST00000457586 ZNF652Q9Y2D9 606 aa30.91■■■□□ 2.54
PRNP-204ENST00000457586 RRP7AQ9Y3A4 280 aaKnown RBP30.91■■■□□ 2.54
PRNP-204ENST00000457586 ATP10DQ9P241 1426 aa30.9■■■□□ 2.54
PRNP-204ENST00000457586 ZNF316A6NFI3 1004 aaPredicted RBP30.89■■■□□ 2.54
PRNP-204ENST00000457586 PRR5LQ6MZQ0 368 aa30.89■■■□□ 2.54
PRNP-204ENST00000457586 PDZRN3Q9UPQ7 1066 aa30.89■■■□□ 2.54
PRNP-204ENST00000457586 ERBB4Q15303 1308 aa30.89■■■□□ 2.54
PRNP-204ENST00000457586 BRIP1Q9BX63 1249 aa30.88■■■□□ 2.53
PRNP-204ENST00000457586 NEUROD2Q15784 382 aa30.87■■■□□ 2.53
PRNP-204ENST00000457586 H0YIN7 160 aa30.85■■■□□ 2.53
PRNP-204ENST00000457586 CHL1O00533 1208 aa30.85■■■□□ 2.53
PRNP-204ENST00000457586 ARHGAP27Q6ZUM4 889 aa30.85■■■□□ 2.53
PRNP-204ENST00000457586 PDE6BP35913 854 aa30.84■■■□□ 2.53
PRNP-204ENST00000457586 C2CD5Q86YS7 1000 aa30.84■■■□□ 2.53
PRNP-204ENST00000457586 CNBD1Q8NA66 436 aa30.84■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms