RNA–Protein interactions for RNA: ENST00000457183.6

THBS3-203, Transcript of thrombospondin 3, humanhuman

TSL 2 BASIC

Gene THBS3, Length 2,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-203ENST00000457183 BRPF1P55201 1214 aaPredicted RBP12.04□□□□□ -0.48
THBS3-203ENST00000457183 AMOTQ4VCS5 1084 aa12.04□□□□□ -0.48
THBS3-203ENST00000457183 SIRT2Q8IXJ6 389 aa12.04□□□□□ -0.48
THBS3-203ENST00000457183 AK9Q5TCS8 1911 aa12.04□□□□□ -0.48
THBS3-203ENST00000457183 IBTKQ9P2D0 1353 aaPredicted RBP12.04□□□□□ -0.48
THBS3-203ENST00000457183 WDR17Q8IZU2 1322 aa12.04□□□□□ -0.48
THBS3-203ENST00000457183 EVA1CP58658 441 aa12.04□□□□□ -0.48
THBS3-203ENST00000457183 MTHFSDQ2M296 383 aaKnown RBP12.04□□□□□ -0.48
THBS3-203ENST00000457183 ZSCAN30Q86W11 494 aa12.04□□□□□ -0.48
THBS3-203ENST00000457183 KIAA1211Q6ZU35 1233 aa12.03□□□□□ -0.48
THBS3-203ENST00000457183 ANP32BQ92688 251 aaKnown RBP12.03□□□□□ -0.48
THBS3-203ENST00000457183 ZNF428Q96B54 188 aa12.03□□□□□ -0.48
THBS3-203ENST00000457183 LRRC37A3O60309 1634 aa12.03□□□□□ -0.48
THBS3-203ENST00000457183 CDC45O75419 566 aa12.02□□□□□ -0.48
THBS3-203ENST00000457183 CSB-PGBD3P0DP91 1061 aa12.02□□□□□ -0.48
THBS3-203ENST00000457183 PLEKHO1Q53GL0 409 aaPredicted RBP12.02□□□□□ -0.48
THBS3-203ENST00000457183 USHBP1Q8N6Y0 703 aa12.02□□□□□ -0.48
THBS3-203ENST00000457183 CHMP4BQ9H444 224 aaKnown RBP12.02□□□□□ -0.48
THBS3-203ENST00000457183 PARP4Q9UKK3 1724 aaKnown RBP12.02□□□□□ -0.48
THBS3-203ENST00000457183 FAM98CQ17RN3 349 aaKnown RBP12.02□□□□□ -0.49
THBS3-203ENST00000457183 IFT57Q9NWB7 429 aa12.02□□□□□ -0.49
THBS3-203ENST00000457183 NLRP2Q9NX02 1062 aa12.02□□□□□ -0.49
THBS3-203ENST00000457183 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.02□□□□□ -0.49
THBS3-203ENST00000457183 VAMP4O75379 141 aa12.02□□□□□ -0.49
THBS3-203ENST00000457183 GNAI1P63096 354 aa12.02□□□□□ -0.49
THBS3-203ENST00000457183 MRPL50Q8N5N7 158 aaKnown RBP12.02□□□□□ -0.49
THBS3-203ENST00000457183 ARHGAP45Q92619 1136 aa12.02□□□□□ -0.49
THBS3-203ENST00000457183 PKD1L3Q7Z443 1732 aa12.01□□□□□ -0.49
THBS3-203ENST00000457183 MAP3K5Q99683 1374 aa12.01□□□□□ -0.49
THBS3-203ENST00000457183 GNAT3A8MTJ3 354 aa12.01□□□□□ -0.49
THBS3-203ENST00000457183 GSPT1P15170 499 aaKnown RBP12.01□□□□□ -0.49
THBS3-203ENST00000457183 SEPT12Q8IYM1 358 aa12.01□□□□□ -0.49
THBS3-203ENST00000457183 RTF1Q92541 710 aaKnown RBP12.01□□□□□ -0.49
THBS3-203ENST00000457183 PDCL3Q9H2J4 239 aa12.01□□□□□ -0.49
THBS3-203ENST00000457183 ZNF853P0CG23 659 aa12.01□□□□□ -0.49
THBS3-203ENST00000457183 MCTP1Q6DN14 999 aa12.01□□□□□ -0.49
THBS3-203ENST00000457183 TSPYL6Q8N831 410 aa12.01□□□□□ -0.49
THBS3-203ENST00000457183 OVOS2A0A0G2JMS6 1433 aa12□□□□□ -0.49
THBS3-203ENST00000457183 OFD1O75665 1012 aa12□□□□□ -0.49
THBS3-203ENST00000457183 MSNP26038 577 aaKnown RBP12□□□□□ -0.49
THBS3-203ENST00000457183 ZNF445P59923 1031 aa12□□□□□ -0.49
THBS3-203ENST00000457183 RAPGEF4Q8WZA2 1011 aa12□□□□□ -0.49
THBS3-203ENST00000457183 CFAP44Q96MT7 982 aa12□□□□□ -0.49
THBS3-203ENST00000457183 CARD10Q9BWT7 1032 aa12□□□□□ -0.49
THBS3-203ENST00000457183 BCL11BQ9C0K0 894 aaPredicted RBP12□□□□□ -0.49
THBS3-203ENST00000457183 SPATA31A5Q5VU36 1347 aa12□□□□□ -0.49
THBS3-203ENST00000457183 SPATA31A7Q8IWB4 1347 aa12□□□□□ -0.49
THBS3-203ENST00000457183 RBM10P98175 930 aaKnown RBP12□□□□□ -0.49
THBS3-203ENST00000457183 UPF1Q92900 1129 aaKnown RBP eCLIP12□□□□□ -0.49
THBS3-203ENST00000457183 THUMPD2Q9BTF0 503 aaKnown RBP12□□□□□ -0.49
THBS3-203ENST00000457183 ELL2O00472 640 aaPredicted RBP11.99□□□□□ -0.49
THBS3-203ENST00000457183 TATP17735 454 aaPredicted RBP11.99□□□□□ -0.49
THBS3-203ENST00000457183 RABEP1Q15276 862 aa11.99□□□□□ -0.49
THBS3-203ENST00000457183 ZSCAN23Q3MJ62 389 aa11.99□□□□□ -0.49
THBS3-203ENST00000457183 AKAP4Q5JQC9 854 aa11.99□□□□□ -0.49
THBS3-203ENST00000457183 CAVIN1Q6NZI2 390 aaKnown RBP11.99□□□□□ -0.49
THBS3-203ENST00000457183 ADAMTS7Q9UKP4 1686 aa11.99□□□□□ -0.49
THBS3-203ENST00000457183 CRB1P82279 1406 aa11.99□□□□□ -0.49
THBS3-203ENST00000457183 NCLP19338 710 aaKnown RBP11.99□□□□□ -0.49
THBS3-203ENST00000457183 PKP1Q13835 747 aa11.99□□□□□ -0.49
THBS3-203ENST00000457183 LARP1Q6PKG0 1096 aaKnown RBP11.99□□□□□ -0.49
THBS3-203ENST00000457183 BABAM1Q9NWV8 329 aa11.99□□□□□ -0.49
THBS3-203ENST00000457183 ABCC4O15439 1325 aa11.99□□□□□ -0.49
THBS3-203ENST00000457183 CYP2E1P05181 493 aaPredicted RBP11.98□□□□□ -0.49
THBS3-203ENST00000457183 NUCB2P80303 420 aa11.98□□□□□ -0.49
THBS3-203ENST00000457183 TOM1L2Q6ZVM7 507 aa11.98□□□□□ -0.49
THBS3-203ENST00000457183 PLEKHM2Q8IWE5 1019 aa11.98□□□□□ -0.49
THBS3-203ENST00000457183 LMBRD1Q9NUN5 540 aa11.98□□□□□ -0.49
THBS3-203ENST00000457183 SPATA31A1Q5TZJ5 1347 aa11.98□□□□□ -0.49
THBS3-203ENST00000457183 SPG7Q9UQ90 795 aa11.98□□□□□ -0.49
THBS3-203ENST00000457183 MEGF6O75095 1541 aa11.97□□□□□ -0.49
THBS3-203ENST00000457183 BRWD3Q6RI45 1802 aa11.97□□□□□ -0.49
THBS3-203ENST00000457183 CEMIPQ8WUJ3 1361 aa11.97□□□□□ -0.49
THBS3-203ENST00000457183 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.97□□□□□ -0.49
THBS3-203ENST00000457183 USP26Q9BXU7 913 aa11.97□□□□□ -0.49
THBS3-203ENST00000457183 CHL1O00533 1208 aa11.96□□□□□ -0.49
THBS3-203ENST00000457183 FGD1P98174 961 aa11.96□□□□□ -0.49
THBS3-203ENST00000457183 HS1BP3Q53T59 392 aa11.96□□□□□ -0.49
THBS3-203ENST00000457183 C1orf141Q5JVX7 400 aa11.96□□□□□ -0.49
THBS3-203ENST00000457183 ZNF530Q6P9A1 599 aaPredicted RBP11.96□□□□□ -0.49
THBS3-203ENST00000457183 MCM10Q7L590 875 aa11.96□□□□□ -0.49
THBS3-203ENST00000457183 RBSNQ9H1K0 784 aa11.96□□□□□ -0.49
THBS3-203ENST00000457183 WNK3Q9BYP7 1800 aa11.96□□□□□ -0.49
THBS3-203ENST00000457183 ONECUT3O60422 494 aaPredicted RBP11.96□□□□□ -0.49
THBS3-203ENST00000457183 TTC22Q5TAA0 569 aa11.96□□□□□ -0.49
THBS3-203ENST00000457183 KRT27Q7Z3Y8 459 aa11.96□□□□□ -0.49
THBS3-203ENST00000457183 MBIPQ9NS73 344 aa11.96□□□□□ -0.49
THBS3-203ENST00000457183 SCN11AQ9UI33 1791 aa11.95□□□□□ -0.5
THBS3-203ENST00000457183 PRIM1P49642 420 aaKnown RBP11.95□□□□□ -0.5
THBS3-203ENST00000457183 DCTN1Q14203 1278 aa11.95□□□□□ -0.5
THBS3-203ENST00000457183 C16orf71Q8IYS4 520 aaPredicted RBP11.95□□□□□ -0.5
THBS3-203ENST00000457183 NOL7Q9UMY1 257 aaKnown RBP11.95□□□□□ -0.5
THBS3-203ENST00000457183 TWISTNBQ3B726 338 aaPredicted RBP11.95□□□□□ -0.5
THBS3-203ENST00000457183 PDLIM2Q96JY6 352 aa11.95□□□□□ -0.5
THBS3-203ENST00000457183 DCTPP1Q9H773 170 aa11.95□□□□□ -0.5
THBS3-203ENST00000457183 PRPF40AO75400 957 aaKnown RBP11.95□□□□□ -0.5
THBS3-203ENST00000457183 TERF1P54274 439 aa11.95□□□□□ -0.5
THBS3-203ENST00000457183 IL17REQ8NFR9 667 aa11.95□□□□□ -0.5
THBS3-203ENST00000457183 FAM13BQ9NYF5 915 aa11.95□□□□□ -0.5
THBS3-203ENST00000457183 SIPA1L3O60292 1781 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms