RNA–Protein interactions for RNA: ENST00000456330.1

TSC22D4-204, Transcript of TSC22 domain family member 4, humanhuman

TSL 3

Gene TSC22D4, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4-204ENST00000456330 CCDC87Q9NVE4 849 aa19.49■□□□□ 0.71
TSC22D4-204ENST00000456330 USP42Q9H9J4 1324 aaKnown RBP19.49■□□□□ 0.71
TSC22D4-204ENST00000456330 SBF1O95248 1867 aa19.48■□□□□ 0.71
TSC22D4-204ENST00000456330 HSPA6P17066 643 aa19.48■□□□□ 0.71
TSC22D4-204ENST00000456330 SRP68Q9UHB9 627 aaKnown RBP19.48■□□□□ 0.71
TSC22D4-204ENST00000456330 A0A0G2JLW4 131 aa19.47■□□□□ 0.71
TSC22D4-204ENST00000456330 INTS5Q6P9B9 1019 aaKnown RBP19.47■□□□□ 0.71
TSC22D4-204ENST00000456330 NUDCQ9Y266 331 aa19.47■□□□□ 0.71
TSC22D4-204ENST00000456330 COL15A1P39059 1388 aa19.46■□□□□ 0.71
TSC22D4-204ENST00000456330 DPEP1P16444 411 aa19.46■□□□□ 0.71
TSC22D4-204ENST00000456330 KCNA3P22001 575 aa19.46■□□□□ 0.71
TSC22D4-204ENST00000456330 BCS1LQ9Y276 419 aa19.46■□□□□ 0.71
TSC22D4-204ENST00000456330 ZBTB1Q9Y2K1 713 aa19.46■□□□□ 0.71
TSC22D4-204ENST00000456330 PARP3Q9Y6F1 533 aa19.46■□□□□ 0.71
TSC22D4-204ENST00000456330 CACNA1SQ13698 1873 aa19.45■□□□□ 0.7
TSC22D4-204ENST00000456330 TEFQ10587 303 aa19.45■□□□□ 0.7
TSC22D4-204ENST00000456330 DDX10Q13206 875 aaKnown RBP19.45■□□□□ 0.7
TSC22D4-204ENST00000456330 ANKRD31Q8N7Z5 1873 aa19.45■□□□□ 0.7
TSC22D4-204ENST00000456330 SOS1Q07889 1333 aaPredicted RBP19.45■□□□□ 0.7
TSC22D4-204ENST00000456330 CYP19A1P11511 503 aaPredicted RBP19.44■□□□□ 0.7
TSC22D4-204ENST00000456330 DDR1Q08345 913 aa19.44■□□□□ 0.7
TSC22D4-204ENST00000456330 COL11A2P13942 1736 aaPredicted RBP19.44■□□□□ 0.7
TSC22D4-204ENST00000456330 HEG1Q9ULI3 1381 aa19.44■□□□□ 0.7
TSC22D4-204ENST00000456330 FKBP8Q14318 412 aa19.43■□□□□ 0.7
TSC22D4-204ENST00000456330 MCM10Q7L590 875 aa19.43■□□□□ 0.7
TSC22D4-204ENST00000456330 TTC5Q8N0Z6 440 aa19.43■□□□□ 0.7
TSC22D4-204ENST00000456330 ZNF496Q96IT1 587 aaPredicted RBP19.43■□□□□ 0.7
TSC22D4-204ENST00000456330 TNRC6CQ9HCJ0 1690 aaKnown RBP19.43■□□□□ 0.7
TSC22D4-204ENST00000456330 KCNQ3O43525 872 aa19.42■□□□□ 0.7
TSC22D4-204ENST00000456330 DCTN1Q14203 1278 aa19.42■□□□□ 0.7
TSC22D4-204ENST00000456330 FCHSD2O94868 740 aa19.41■□□□□ 0.7
TSC22D4-204ENST00000456330 ZNF790Q6PG37 636 aa19.41■□□□□ 0.7
TSC22D4-204ENST00000456330 WDR90Q96KV7 1748 aa19.4■□□□□ 0.7
TSC22D4-204ENST00000456330 POLRMTO00411 1230 aaKnown RBP19.4■□□□□ 0.7
TSC22D4-204ENST00000456330 TM4SF1P30408 202 aa19.39■□□□□ 0.69
TSC22D4-204ENST00000456330 VSIG10Q8N0Z9 540 aa19.39■□□□□ 0.69
TSC22D4-204ENST00000456330 USPL1Q5W0Q7 1092 aa19.38■□□□□ 0.69
TSC22D4-204ENST00000456330 ARHGAP27Q6ZUM4 889 aa19.38■□□□□ 0.69
TSC22D4-204ENST00000456330 PIM2Q9P1W9 311 aa19.38■□□□□ 0.69
TSC22D4-204ENST00000456330 BTBD11A6QL63 1104 aa19.37■□□□□ 0.69
TSC22D4-204ENST00000456330 CANXP27824 592 aaKnown RBP19.37■□□□□ 0.69
TSC22D4-204ENST00000456330 TIAM2Q8IVF5 1701 aa19.37■□□□□ 0.69
TSC22D4-204ENST00000456330 PRAMEF22A3QJZ6 481 aa19.36■□□□□ 0.69
TSC22D4-204ENST00000456330 TOMM70O94826 608 aa19.36■□□□□ 0.69
TSC22D4-204ENST00000456330 PLEKHF1Q96S99 279 aa19.36■□□□□ 0.69
TSC22D4-204ENST00000456330 CCDC88AQ3V6T2 1871 aa19.35■□□□□ 0.69
TSC22D4-204ENST00000456330 RALBP1Q15311 655 aa19.35■□□□□ 0.69
TSC22D4-204ENST00000456330 DALRD3Q5D0E6 543 aaKnown RBP19.35■□□□□ 0.69
TSC22D4-204ENST00000456330 IFFO2Q5TF58 517 aa19.35■□□□□ 0.69
TSC22D4-204ENST00000456330 RTF1Q92541 710 aaKnown RBP19.35■□□□□ 0.69
TSC22D4-204ENST00000456330 FMNL2Q96PY5 1086 aa19.35■□□□□ 0.69
TSC22D4-204ENST00000456330 BCL2L12Q9HB09 334 aa19.35■□□□□ 0.69
TSC22D4-204ENST00000456330 NMRK2Q9NPI5 230 aa19.35■□□□□ 0.69
TSC22D4-204ENST00000456330 CARMIL3Q8ND23 1372 aa19.34■□□□□ 0.69
TSC22D4-204ENST00000456330 MYBBP1AQ9BQG0 1328 aaKnown RBP19.34■□□□□ 0.69
TSC22D4-204ENST00000456330 CHRNA5P30532 468 aa19.34■□□□□ 0.69
TSC22D4-204ENST00000456330 PIP4K2AP48426 406 aaPredicted RBP19.34■□□□□ 0.69
TSC22D4-204ENST00000456330 C9orf131Q5VYM1 1079 aa19.34■□□□□ 0.69
TSC22D4-204ENST00000456330 THUMPD2Q9BTF0 503 aaKnown RBP19.34■□□□□ 0.69
TSC22D4-204ENST00000456330 NARFQ9UHQ1 456 aa19.34■□□□□ 0.69
TSC22D4-204ENST00000456330 ZNF330Q9Y3S2 320 aaPredicted RBP19.34■□□□□ 0.69
TSC22D4-204ENST00000456330 NUP98P52948 1817 aa19.34■□□□□ 0.69
TSC22D4-204ENST00000456330 ZPR1O75312 459 aa19.33■□□□□ 0.68
TSC22D4-204ENST00000456330 ARFGEF2Q9Y6D5 1785 aa19.33■□□□□ 0.68
TSC22D4-204ENST00000456330 MAPK8IP3Q9UPT6 1336 aa19.32■□□□□ 0.68
TSC22D4-204ENST00000456330 APLP1P51693 650 aa19.32■□□□□ 0.68
TSC22D4-204ENST00000456330 NFIXQ14938 502 aa19.32■□□□□ 0.68
TSC22D4-204ENST00000456330 STARD3NLO95772 234 aa19.31■□□□□ 0.68
TSC22D4-204ENST00000456330 A1BGP04217 495 aa19.31■□□□□ 0.68
TSC22D4-204ENST00000456330 EIF5P55010 431 aaKnown RBP19.31■□□□□ 0.68
TSC22D4-204ENST00000456330 NFE2L2Q16236 605 aa19.31■□□□□ 0.68
TSC22D4-204ENST00000456330 MIS18AQ9NYP9 233 aa19.31■□□□□ 0.68
TSC22D4-204ENST00000456330 DICER1Q9UPY3 1922 aaKnown RBP19.31■□□□□ 0.68
TSC22D4-204ENST00000456330 RBM46Q8TBY0 533 aaKnown RBP19.3■□□□□ 0.68
TSC22D4-204ENST00000456330 FER1L6Q2WGJ9 1857 aa19.29■□□□□ 0.68
TSC22D4-204ENST00000456330 USP16Q9Y5T5 823 aa19.29■□□□□ 0.68
TSC22D4-204ENST00000456330 ANKRD36CQ5JPF3 1778 aa19.29■□□□□ 0.68
TSC22D4-204ENST00000456330 ZC3H4Q9UPT8 1303 aaKnown RBP19.28■□□□□ 0.68
TSC22D4-204ENST00000456330 PCNTO95613 3336 aa19.28■□□□□ 0.68
TSC22D4-204ENST00000456330 HTATSF1O43719 755 aaKnown RBP19.28■□□□□ 0.68
TSC22D4-204ENST00000456330 NEFMP07197 916 aa19.28■□□□□ 0.68
TSC22D4-204ENST00000456330 CCDC146Q8IYE0 955 aa19.28■□□□□ 0.68
TSC22D4-204ENST00000456330 DNAJC5GQ8N7S2 189 aa19.28■□□□□ 0.68
TSC22D4-204ENST00000456330 RNF181Q9P0P0 153 aa19.28■□□□□ 0.68
TSC22D4-204ENST00000456330 KDM2BQ8NHM5 1336 aa19.27■□□□□ 0.68
TSC22D4-204ENST00000456330 BICDL1Q6ZP65 573 aa19.27■□□□□ 0.68
TSC22D4-204ENST00000456330 TBC1D2BQ9UPU7 963 aa19.27■□□□□ 0.68
TSC22D4-204ENST00000456330 SERPINB2P05120 415 aa19.26■□□□□ 0.67
TSC22D4-204ENST00000456330 IL6STP40189 918 aaPredicted RBP19.25■□□□□ 0.67
TSC22D4-204ENST00000456330 TBC1D9BQ66K14 1250 aa19.25■□□□□ 0.67
TSC22D4-204ENST00000456330 TEX13AQ9BXU3 409 aaPredicted RBP19.25■□□□□ 0.67
TSC22D4-204ENST00000456330 SNRPA1P09661 255 aaKnown RBP19.24■□□□□ 0.67
TSC22D4-204ENST00000456330 PRELPP51888 382 aa19.24■□□□□ 0.67
TSC22D4-204ENST00000456330 RASSF7Q02833 373 aa19.24■□□□□ 0.67
TSC22D4-204ENST00000456330 FSTL1Q12841 308 aa19.24■□□□□ 0.67
TSC22D4-204ENST00000456330 TAF7Q15545 349 aaPredicted RBP19.24■□□□□ 0.67
TSC22D4-204ENST00000456330 PRKRIP1Q9H875 184 aaPredicted RBP19.24■□□□□ 0.67
TSC22D4-204ENST00000456330 RRP7AQ9Y3A4 280 aaKnown RBP19.24■□□□□ 0.67
TSC22D4-204ENST00000456330 NBPF26B4DH59 902 aa19.23■□□□□ 0.67
TSC22D4-204ENST00000456330 CAMTA2O94983 1202 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms