RNA–Protein interactions for RNA: ENST00000456210.5

SEMA3B-208, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 2,065 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-208ENST00000456210 RRS1Q15050 365 aaKnown RBP22.77■■□□□ 1.24
SEMA3B-208ENST00000456210 XRN1Q8IZH2 1706 aaKnown RBP22.77■■□□□ 1.24
SEMA3B-208ENST00000456210 CCDC61Q9Y6R9 512 aa22.77■■□□□ 1.24
SEMA3B-208ENST00000456210 KDM4AO75164 1064 aa22.77■■□□□ 1.23
SEMA3B-208ENST00000456210 KCNA6P17658 529 aa22.77■■□□□ 1.23
SEMA3B-208ENST00000456210 UBE2HP62256 183 aa22.77■■□□□ 1.23
SEMA3B-208ENST00000456210 NOL8Q76FK4 1167 aaKnown RBP22.77■■□□□ 1.23
SEMA3B-208ENST00000456210 PRDM10Q9NQV6 1147 aa22.77■■□□□ 1.23
SEMA3B-208ENST00000456210 HSPA4P34932 840 aa22.76■■□□□ 1.23
SEMA3B-208ENST00000456210 FUCA2Q9BTY2 467 aa22.76■■□□□ 1.23
SEMA3B-208ENST00000456210 EXOC6BQ9Y2D4 811 aa22.76■■□□□ 1.23
SEMA3B-208ENST00000456210 HCLS1P14317 486 aaPredicted RBP22.75■■□□□ 1.23
SEMA3B-208ENST00000456210 TSHZ3Q63HK5 1081 aa22.75■■□□□ 1.23
SEMA3B-208ENST00000456210 JARID2Q92833 1246 aaPredicted RBP22.75■■□□□ 1.23
SEMA3B-208ENST00000456210 UPF3BQ9BZI7 483 aaKnown RBP22.75■■□□□ 1.23
SEMA3B-208ENST00000456210 STRCP1A6NGW2 1772 aa22.75■■□□□ 1.23
SEMA3B-208ENST00000456210 ZNF335Q9H4Z2 1342 aaPredicted RBP22.75■■□□□ 1.23
SEMA3B-208ENST00000456210 CHD2O14647 1828 aaKnown RBP22.75■■□□□ 1.23
SEMA3B-208ENST00000456210 GTPBP4Q9BZE4 634 aaKnown RBP22.75■■□□□ 1.23
SEMA3B-208ENST00000456210 FAM208AQ9UK61 1670 aaKnown RBP22.75■■□□□ 1.23
SEMA3B-208ENST00000456210 DIP2AQ14689 1571 aa22.74■■□□□ 1.23
SEMA3B-208ENST00000456210 TPM3P06753 285 aa22.74■■□□□ 1.23
SEMA3B-208ENST00000456210 ZSCAN22P10073 491 aaPredicted RBP22.74■■□□□ 1.23
SEMA3B-208ENST00000456210 MCM10Q7L590 875 aa22.74■■□□□ 1.23
SEMA3B-208ENST00000456210 AEBP1Q8IUX7 1158 aa22.74■■□□□ 1.23
SEMA3B-208ENST00000456210 EIF4A2Q14240 407 aaKnown RBP22.73■■□□□ 1.23
SEMA3B-208ENST00000456210 TSC1Q92574 1164 aa22.73■■□□□ 1.23
SEMA3B-208ENST00000456210 CNPY2Q9Y2B0 182 aa22.73■■□□□ 1.23
SEMA3B-208ENST00000456210 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.73■■□□□ 1.23
SEMA3B-208ENST00000456210 FOXD4L6Q3SYB3 417 aaPredicted RBP22.72■■□□□ 1.23
SEMA3B-208ENST00000456210 SULT6B1Q6IMI4 303 aa22.72■■□□□ 1.23
SEMA3B-208ENST00000456210 FOXD4L3Q6VB84 417 aaPredicted RBP22.72■■□□□ 1.23
SEMA3B-208ENST00000456210 KIAA1524Q8TCG1 905 aa22.72■■□□□ 1.23
SEMA3B-208ENST00000456210 RILPL2Q969X0 211 aa22.72■■□□□ 1.23
SEMA3B-208ENST00000456210 BCL2L12Q9HB09 334 aa22.72■■□□□ 1.23
SEMA3B-208ENST00000456210 TRIM6-TRIM34B2RNG4 842 aa22.72■■□□□ 1.23
SEMA3B-208ENST00000456210 C17orf53Q8N3J3 647 aaPredicted RBP22.72■■□□□ 1.23
SEMA3B-208ENST00000456210 CACNA1FO60840 1977 aa22.71■■□□□ 1.23
SEMA3B-208ENST00000456210 G2E3Q7L622 706 aa22.71■■□□□ 1.23
SEMA3B-208ENST00000456210 MPNDQ8N594 471 aa22.71■■□□□ 1.23
SEMA3B-208ENST00000456210 DIAPH3Q9NSV4 1193 aa22.71■■□□□ 1.23
SEMA3B-208ENST00000456210 NALCNQ8IZF0 1738 aa22.71■■□□□ 1.23
SEMA3B-208ENST00000456210 ATP8B2P98198 1209 aa22.7■■□□□ 1.23
SEMA3B-208ENST00000456210 SLC4A10Q6U841 1118 aa22.7■■□□□ 1.23
SEMA3B-208ENST00000456210 TTC14Q96N46 770 aa22.7■■□□□ 1.23
SEMA3B-208ENST00000456210 F6X3S4 739 aa22.7■■□□□ 1.22
SEMA3B-208ENST00000456210 GNAI3P08754 354 aa22.7■■□□□ 1.22
SEMA3B-208ENST00000456210 ATP6V1DQ9Y5K8 247 aa22.7■■□□□ 1.22
SEMA3B-208ENST00000456210 PPP4R3BQ5MIZ7 849 aa22.69■■□□□ 1.22
SEMA3B-208ENST00000456210 UNC5CLQ8IV45 518 aa22.69■■□□□ 1.22
SEMA3B-208ENST00000456210 PEAK1Q9H792 1746 aa22.69■■□□□ 1.22
SEMA3B-208ENST00000456210 CRYBG1Q9Y4K1 1723 aa22.69■■□□□ 1.22
SEMA3B-208ENST00000456210 RAD50Q92878 1312 aa22.69■■□□□ 1.22
SEMA3B-208ENST00000456210 STX6O43752 255 aa22.69■■□□□ 1.22
SEMA3B-208ENST00000456210 ANKRD7Q92527 254 aa22.69■■□□□ 1.22
SEMA3B-208ENST00000456210 ZHX1Q9UKY1 873 aaPredicted RBP22.69■■□□□ 1.22
SEMA3B-208ENST00000456210 PRR36Q9H6K5 1346 aa22.68■■□□□ 1.22
SEMA3B-208ENST00000456210 F13A1P00488 732 aa22.68■■□□□ 1.22
SEMA3B-208ENST00000456210 KCNF1Q9H3M0 494 aa22.68■■□□□ 1.22
SEMA3B-208ENST00000456210 PNMA6EA0A0J9YXQ4 647 aa22.67■■□□□ 1.22
SEMA3B-208ENST00000456210 ZBTB7CA1YPR0 619 aa22.67■■□□□ 1.22
SEMA3B-208ENST00000456210 ATP2B3Q16720 1220 aa22.67■■□□□ 1.22
SEMA3B-208ENST00000456210 IL25Q9H293 177 aa22.67■■□□□ 1.22
SEMA3B-208ENST00000456210 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.67■■□□□ 1.22
SEMA3B-208ENST00000456210 PXDNLA1KZ92 1463 aa22.67■■□□□ 1.22
SEMA3B-208ENST00000456210 CTIFO43310 598 aaKnown RBP22.67■■□□□ 1.22
SEMA3B-208ENST00000456210 KIF20AO95235 890 aa22.67■■□□□ 1.22
SEMA3B-208ENST00000456210 CHAF1AQ13111 956 aaPredicted RBP22.67■■□□□ 1.22
SEMA3B-208ENST00000456210 TOPAZ1Q8N9V7 1692 aa22.67■■□□□ 1.22
SEMA3B-208ENST00000456210 SYT1P21579 422 aa22.66■■□□□ 1.22
SEMA3B-208ENST00000456210 LRRC37A3O60309 1634 aa22.66■■□□□ 1.22
SEMA3B-208ENST00000456210 CBX1P83916 185 aa22.66■■□□□ 1.22
SEMA3B-208ENST00000456210 PDCL2Q8N4E4 241 aa22.66■■□□□ 1.22
SEMA3B-208ENST00000456210 AP5Z1O43299 807 aa22.65■■□□□ 1.22
SEMA3B-208ENST00000456210 LIMCH1Q9UPQ0 1083 aa22.65■■□□□ 1.22
SEMA3B-208ENST00000456210 FMN2Q9NZ56 1722 aa22.64■■□□□ 1.22
SEMA3B-208ENST00000456210 GOLGA6L6A8MZA4 724 aa22.64■■□□□ 1.22
SEMA3B-208ENST00000456210 PYCARDQ9ULZ3 195 aa22.64■■□□□ 1.22
SEMA3B-208ENST00000456210 SNX14Q9Y5W7 946 aa22.64■■□□□ 1.22
SEMA3B-208ENST00000456210 OVOS2A0A0J9YW53 1432 aa22.64■■□□□ 1.21
SEMA3B-208ENST00000456210 OVOS2Q6IE36 1432 aa22.64■■□□□ 1.21
SEMA3B-208ENST00000456210 RIOK3O14730 519 aaKnown RBP22.64■■□□□ 1.21
SEMA3B-208ENST00000456210 SGSM2O43147 1006 aa22.64■■□□□ 1.21
SEMA3B-208ENST00000456210 AK2P54819 239 aa22.63■■□□□ 1.21
SEMA3B-208ENST00000456210 GIMAP6Q6P9H5 292 aa22.62■■□□□ 1.21
SEMA3B-208ENST00000456210 RUFY3Q7L099 469 aa22.62■■□□□ 1.21
SEMA3B-208ENST00000456210 TSPYL4Q9UJ04 414 aa22.62■■□□□ 1.21
SEMA3B-208ENST00000456210 FIBPO43427 364 aa22.62■■□□□ 1.21
SEMA3B-208ENST00000456210 PROSER2Q86WR7 435 aaPredicted RBP22.62■■□□□ 1.21
SEMA3B-208ENST00000456210 SMC3Q9UQE7 1217 aa22.62■■□□□ 1.21
SEMA3B-208ENST00000456210 SOS1Q07889 1333 aaPredicted RBP22.62■■□□□ 1.21
SEMA3B-208ENST00000456210 PLEKHG3A1L390 1219 aa22.61■■□□□ 1.21
SEMA3B-208ENST00000456210 STK31Q9BXU1 1019 aa22.61■■□□□ 1.21
SEMA3B-208ENST00000456210 LSG1Q9H089 658 aaKnown RBP22.61■■□□□ 1.21
SEMA3B-208ENST00000456210 FAM177BA6PVY3 158 aa22.61■■□□□ 1.21
SEMA3B-208ENST00000456210 TTC21BQ7Z4L5 1316 aa22.6■■□□□ 1.21
SEMA3B-208ENST00000456210 FLIIQ13045 1269 aa22.6■■□□□ 1.21
SEMA3B-208ENST00000456210 SYCP1Q15431 976 aa22.6■■□□□ 1.21
SEMA3B-208ENST00000456210 NWD1Q149M9 1564 aa22.6■■□□□ 1.21
SEMA3B-208ENST00000456210 CCDC192P0DO97 292 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms